Single-Molecule Localization Microscopy

Benchmarking of Single-Molecule Localization Microscopy Software

Comprehensive review of the single-molecule localization microscopy (SMLM) software packages.

This benchmarking uses on common reference datasets that simulates biological structures and image formation process. This evaluation of the software packages is performed with well-defined metrics to get an objective and quantitative assessment.

The challenge is now turned into a permanent challenge.




Assessment 7 June 2015

The comparative assessment will be published in the next weeks.

Software 24 Jan. 2015

Update of the comprehensive list of SMLM software packages. 45 for localization software and 6 for deconvolution-type reconstruction software.

Conditions of use 27 Sept. 2014

These reference datasets are designed to be largely used by the developpers to validate theirs software and by the users to check a software. They can be freely used if the sources and references are properly cited.

Online challenge 11 July 2013

The ISBI Challenge is turned to a permanent online challenge.

© 2015 Biomedical Imaging Group, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
Last update: 13 Jun 2015