Benchmarking of Single-Molecule Localization Microscopy Software
Comprehensive review of the single-molecule localization microscopy software based on reference datasets real datasets and synthetic datasets simulating biological structures and image formation process, and based on a objective assessment procedure.
This website presents the software for the reconstruction of the super-resolution images, in the context of single-molecule localization microscopy SMLM, PALM, or STORM.
Super-resolution fluorescence microscopy is an emerging multidisciplinary field that has opened up new opportunities in studying the living cell at the nanometer scale. It overcomes the classical ...Read more
The goal of this challenge is to benchmark currently available localization software. In particular, comparing their performance in terms of detection rate, localization accuracy, and computatio ...Read more
This localization microscopy challenge goes hand in hand with the Open Bio Image Alliance (OBIA) mission. This consortium for bioimaging informatics aims at providing high-quality resources to bio ...Read more
The ISBI Challenge is turned to a permanent online challenge.
Update of the comprehensive list of localization and direct reconstruction software.
These reference datasets are designed to be largely used by the developpers to validate theirs software and by the users to check a software. They can be freely used if the sources and references are properly cited.
Some of these datasets have been used for the ISBI 2013 Grand Challenge organized in the conference IEEE ISBI 2013 at San Francisco to benchmark nearly 30 software.
Biomedical Imaging Group, Ecole Polytechnique Fédérale de Lausanne (EPFL), Lausanne, Switzerland
Last update: 9 Aug 2013