C E G H I L M R S V

C

closeAllWindows() - Static method in class MIJ

Closes all windows.

createColor(byte[][][], boolean) - Static method in class MIJ

Create a new color image in ImageJ from a Matlab variable.

createColor(String, byte[][][], boolean) - Static method in class MIJ

Create a new color image in ImageJ from a Matlab variable with a specified title.

createColor(byte[][][][], boolean) - Static method in class MIJ

Create a new 3D color image in ImageJ from a Matlab variable.

createColor(String, byte[][][][], boolean) - Static method in class MIJ

Create a new 3D color image in ImageJ from a Matlab variable with a specified title.

createImage(Object) - Static method in class MIJ

Create a new image in ImageJ from a Matlab variable.

createImage(String, Object, boolean) - Static method in class MIJ

Create a new image in ImageJ from a Matlab variable with a specified title.

E

error(String) - Static method in class MIJ

Displays a error message in a dialog box titled "ImageJ".

error(String, String) - Static method in class MIJ

Displays a error message in a dialog box specified title.

exit() - Static method in class MIJ

Exits ImageJ.imagej instance

G

getColumn(String) - Static method in class MIJ

Returns a specifying column the current instance of ResultsTable.

getCurrentImage() - Static method in class MIJ

Returns the current (selected) image from ImageJ.

getCurrentTitle() - Static method in class MIJ

Returns the title of the current image window.

getHistogram() - Static method in class MIJ

Returns the histogram of the current image.

getImage(String) - Static method in class MIJ

Returns the specifying image from ImageJ.

getListColumns() - Static method in class MIJ

Returns the list of columns currently used in the ResultsTable.

getListImages() - Static method in class MIJ

Gives the list of the open images in the ImageJ instance.

getLog() - Static method in class MIJ

Returns the contents of the Log window or null if the Log window is not open.

getResultsTable() - Static method in class MIJ

Returns the instance of the ResultsTable.

getRoi(int) - Static method in class MIJ

Get a region of interest (ROI) of the current image with or without calibration.

H

help() - Static method in class MIJ

Give a brief description of the methods.

I

imagej - Static variable in class MIJ

L

log(String) - Static method in class MIJ

Displays a message in the log window of ImageJ.

M

main(String[]) - Static method in class MIJ

Starts new instance of ImageJ.

MIJ - Class in <Unnamed>

Matlab to ImageJ interface.

MIJ() - Constructor for class MIJ

Class constructor.

R

run(String) - Static method in class MIJ

Run a ImageJ command without arguments.

run(String, String) - Static method in class MIJ

Run a ImageJ command with specified arguments.

S

selectWindow(String) - Static method in class MIJ

Select a window.

setColumn(String, Object) - Static method in class MIJ

Set a specifying column into the current instance ResultsTable.

setRoi(double[][], int) - Static method in class MIJ

Set a region of interest (ROI) in the current image.

setSlice(int) - Static method in class MIJ

Switches to the specified stack slice, where 1<='slice'<=stack-size.

setThreshold(double, double) - Static method in class MIJ

Set the threshold values of the current image.

setupExt(String) - Static method in class MIJ

Setup the IJPath.

showStatus(String) - Static method in class MIJ

Displays a message in the ImageJ status bar.

start() - Static method in class MIJ

Starts new instance of ImageJ from Matlab.

start(boolean) - Static method in class MIJ

Starts new instance of ImageJ from Matlab with or without verbose mode.

start(String) - Static method in class MIJ

Starts new instance of ImageJ specifying the plugins directory and macros directory.

start(String, String, boolean) - Static method in class MIJ

Starts new instance of ImageJ specifying the plugins directory and macros directory.

start(String, String) - Static method in class MIJ

Starts new instance of ImageJ specifying the command-line options .

V

version() - Static method in class MIJ

Get the version of the MIJ class.

C E G H I L M R S V