# Publications

**No result.**

##### Preprints

- T. Debarre, Q. Denoyelle, J. Fageot, "TV-Based Spline Reconstruction with Fourier Measurements: Uniqueness and Convergence of Grid-Based Methods," Journal of Computational and Applied Mathematics, vol. 422, paper no. 114937, pp. 1-13, in press.

##### Prepublications

- L. Ambrosio, S. Aziznejad, C. Brena, M. Unser, "Linear Inverse Problems with Hessian-Schatten Total Variation," arXiv:2210.04077 [math.FA]
- A. Amini, J. Fageot, M. Unser, "Complex-Order Scale-Invariant Operators and Self-Similar Processes," arXiv:2206.10688 [math.FA]
- S. Aziznejad, J. Campos, M. Unser, "Measuring Complexity of Learning Schemes Using Hessian-Schatten Total Variation," arXiv:2112.06209 [cs.LG]
- P. Bohra, P. del Aguila Pla, J.-F. Giovannelli, M. Unser, "A Statistical Framework to Investigate the Optimality of Neural Networks for Inverse Problems," arXiv:2203.09920 [eess.SP]
- A. Goujon, J. Campos, M. Unser, "Stable Parametrization of Continuous and Piecewise-Linear Functions," arXiv:2203.05261 [math.NA]
- K. Lächler, H. Lajous, M. Unser, M. Bach Cuadra, P. del Aguila Pla, "Self-Supervised Isotropic Superresolution Fetal Brain MRI," arXiv:2211.06502 [eess.IV]
- S. Neumayer, A. Goujon, P. Bohra, M. Unser, "Approximation of Lipschitz Functions Using Deep Spline Neural Networks," arXiv:2204.06233 [cs.LG]
- S. Neumayer, M. Unser, "Explicit Representations for Banach Subspaces of Lizorkin Distributions," arXiv:2203.05312 [math.FA]
- W. Ouyang, F. Beuttenmueller, E. Gómez-de-Mariscal, C. Pape, T. Burke, C. Garcia-López-de-Haro, C. Russell, L. Moya-Sans, C. de-la-Torre-Gutiérrez, D. Schmidt, D. Kutra, M. Novikov, M. Weigert, U. Schmidt, P. Bankhead, G. Jacquemet, D. Sage, R. Henriques, A. Muñoz-Barrutia, E. Lundberg, F. Jug, A. Kreshuk, "BioImage Model Zoo: A Community-Driven Resource for Accessible Deep Learning in BioImage Analysis," bioRxiv 2022.06.07.495102
- M. Unser, "From Kernel Methods to Neural Networks: A Unifying Variational Formulation," arXiv:2206.14625 [cs.LG]

### Journals

Journals • 2023

- P. Bohra, T.-a. Pham, Y. Long, J. Yoo, M. Unser, "Dynamic Fourier Ptychography with Deep Spatiotemporal Priors," Inverse Problems, vol. 39, no. 6, paper no. 064005, June 2023.
- R. Parhi, M. Unser, "The Sparsity of Cycle Spinning for Wavelet-Based Solutions of Linear Inverse Problems," IEEE Signal Processing Letters, vol. 30, pp. 568-572, May 12, 2023.
- M. Pourya, A. Goujon, M. Unser, "Delaunay-Triangulation-Based Learning with Hessian Total-Variation Regularization," IEEE Open Journal of Signal Processing, vol. 4, pp. 167-178, February 28, 2023.
- D. Nieves, J.A. Pike, F. Levet, D.J. Williamson, M. Baragilly, S. Oloketuyi, A. de Marco, J. Griffié, D. Sage, E.A.K. Cohen, J.-B. Sibarita, M. Heilemann, D.M. Owen, "A Framework for Evaluating the Performance of SMLM Cluster Analysis Algorithms," Nature Methods, vol. 20, no. 2, pp. 259-272, February 2023.
- J. Dong, L. Valzania, A. Maillard, T.-a. Pham, S. Gigan, M. Unser, "Phase Retrieval: From Computational Imaging to Machine Learning," IEEE Signal Processing Magazine, vol. 40, no. 1, pp. 45-57, January 2023.
- P. del Aguila Pla, S. Neumayer, M. Unser, "Stability of Image-Reconstruction Algorithms," IEEE Transactions on Computational Imaging, vol. 9, pp. 1-12, 2023.
- M. Unser, "Ridges, Neural Networks, and the Radon Transform," Journal of Machine Learning Research, vol. 24, no. 37, pp. 1-33, 2023.

Journals • 2022

- Y. Liu, J. Dong, T.-a. Pham, F. Marelli, M. Unser, "Mechanical Artifacts in Optical Projection Tomography: Classification and Automatic Calibration," Optics Continuum, vol. 1, no. 12, pp. 2577-2589, December 15, 2022.
- T. Debarre, Q. Denoyelle, J. Fageot, "On the Uniqueness of Solutions for the Basis Pursuit in the Continuum," Inverse Problems, vol. 38, no. 12, paper no. 125005, December 2022.
- P. del Aguila Pla, A. Boquet-Pujadas, J. Jaldén, "Convex Quantization Preserves Logconcavity," IEEE Signal Processing Letters, vol. 29, pp. 2697-2701, December 2022.
- A. Boquet-Pujadas, T. Feaugas, A. Petracchini, A. Grassart, H. Mary, M. Manich, S. Gobaa, J.-C. Olivo-Marin, N. Sauvonnet, E. Labruyère, "4D Live Imaging and Computational Modeling of a Functional Gut-on-a-Chip Evaluate How Peristalsis Facilitates Enteric Pathogen Invasion," Science Advances, vol. 8, no. 42, paper no. eabo5767, October 21, 2022.
- A. d’Arco, F. Xia, A. Boniface, J. Dong, S. Gigan, "Physics-Based Neural Network for Non-Invasive Control of Coherent Light in Scattering Media," Optics Express, vol. 30, no. 17, pp. 30845-30856, August 15, 2022.
- V. Uhlmann, Z. Püspöki, A. Depeursinge, M. Unser, D. Sage, J. Fageot, "Steer’n’Detect: Fast 2D Template Detection with Accurate Orientation Estimation," Bioinformatics, vol. 38, no. 11, pp. 3146-3148, June 1, 2022.
- Y. Liu, J. Dong, C. Schmidt, A. Boquet-Pujadas, J. Extermann, M. Unser, "Artifacts in Optical Projection Tomography Due to Refractive-Index Mismatch: Model and Correction," Optics Letters, vol. 47, no. 11, pp. 2618-2621, June 2022.
- T. Debarre, Q. Denoyelle, M. Unser, J. Fageot, "Sparsest Piecewise-Linear Regression of One-Dimensional Data," Journal of Computational and Applied Mathematics, vol. 406, paper no. 114044, pp. 1-30, May 1, 2022.
- L.G. Jensen, T.Y. Hoh, D.J. Williamson, J. Griffié, D. Sage, P. Rubin-Delanchy, D.M. Owen, "Correction of Multiple-Blinking Artifacts in Photoactivated Localization Microscopy," Nature Methods—Techniques for Life Scientists and Chemists, vol. 19, no. 5, pp. 594-602, May 2022.
- S. Aziznejad, J. Fageot, "The Wavelet Compressibility of Compound Poisson Processes," IEEE Transactions on Information Theory, vol. 68, no. 4, pp. 2752-2766, April 2022.
- F. Soulez, M. Rostykus, C. Moser, M. Unser, "A Constrained Method for Lensless Coherent Imaging of Thin Samples," Applied Optics, vol. 61, no. 9, pp. F34-F46, March 20, 2022.
- S. Aziznejad, T. Debarre, M. Unser, "Sparsest Univariate Learning Models Under Lipschitz Constraint," IEEE Open Journal of Signal Processing, vol. 3, pp. 140-154, March 7, 2022.
- V. Uhlmann, L. Donati, D. Sage, "A Practical Guide to Supervised Deep Learning for Bioimage Analysis: Challenges and Good Practices," IEEE Signal Processing Magazine, vol. 39, no. 2, pp. 73-86, March 2022.
- M. Unser, S. Aziznejad, "Convex Optimization in Sums of Banach Spaces," Applied and Computational Harmonic Analysis, vol. 56, pp. 1-25, January 2022.
- P. Bohra, T.-a. Pham, J. Dong, M. Unser, "Bayesian Inversion for Nonlinear Imaging Models Using Deep Generative Priors," IEEE Transactions on Computational Imaging, vol. 8, pp. 1237-1249, 2022.
- I.L. Jover, T. Debarre, S. Aziznejad, M. Unser, "Coupled Splines for Sparse Curve Fitting," IEEE Transactions on Image Processing, vol. 31, pp. 4707-4718, 2022.
- J. Campos, S. Aziznejad, M. Unser, "Learning of Continuous and Piecewise-Linear Functions with Hessian Total-Variation Regularization," IEEE Open Journal of Signal Processing, vol. 3, pp. 36-48, December 17, (2021), 2022.

Journals • 2021

- J. Yoo, K.H. Jin, H. Gupta, J. Yerly, M. Stuber, M. Unser, "Time-Dependent Deep Image Prior for Dynamic MRI," IEEE Transactions on Medical Imaging, vol. 40, no. 12, pp. 3337-3348, December 2021.
- T.-a. Pham, E. Soubies, F. Soulez, M. Unser, "Optical Diffraction Tomography From Single-Molecule Localization Microscopy," Optics Communications, vol. 499, no. 127290, pp. 1-9, November 15, 2021.
- T. Debarre, S. Aziznejad, M. Unser, "Continuous-Domain Formulation of Inverse Problems for Composite Sparse-Plus-Smooth Signals," IEEE Open Journal of Signal Processing, vol. 2, pp. 545-558, November 9, 2021.
- A. Goujon, S. Aziznejad, A. Naderi, M. Unser, "Shortest-Support Multi-Spline Bases for Generalized Sampling," Journal of Computational and Applied Mathematics, vol. 395, paper no. 113610, pp. 1-18, October 15, 2021.
- E. Gómez-de-Mariscal, C. García-López-de-Haro, W. Ouyang, L. Donati, E. Lundberg, M. Unser, A. Muñoz-Barrutia, D. Sage, "DeepImageJ: A User-Friendly Environment to Run Deep Learning Models in ImageJ," Nature Methods—Techniques for Life Scientists and Chemists, vol. 18, no. 10, pp. 1192-1195, October 2021.
- J. Dong, D. Maestre, C. Conrad-Billroth, T. Juffmann, "Fundamental Bounds on the Precision of iSCAT, COBRI and Dark-Field Microscopy for 3D Localization and Mass Photometry," Journal of Physics D: Applied Physics, vol. 54, no. 39, paper no. 394002, pp. 1-12, September 30, 2021.
- M. Unser, "A Unifying Representer Theorem for Inverse Problems and Machine Learning," Foundations of Computational Mathematics, vol. 21, no. 4, pp. 941-960, August, 2021.
- Q. Juppet, F. De Martino, E. Marcandalli, M. Weigert, O. Burri, M. Unser, C. Brisken, D. Sage, "Deep Learning Enables Individual Xenograft Cell Classification in Histological Images by Analysis of Contextual Features," Journal of Mammary Gland Biology and Neoplasia, vol. 26, no. 2, pp. 101-112, June 2021.
- J. Fageot, T. Humeau, "The Domain of Definition of the Lévy White Noise," Stochastic Processes and Their Applications, vol. 135, pp. 75-102, May 2021.
- S. Aziznejad, M. Unser, "Multikernel Regression with Sparsity Constraint," SIAM Journal on Mathematics of Data Science, vol. 3, no. 1, pp. 201-224, 2021.
- S. Aziznejad, M. Unser, "Duality Mapping for Schatten Matrix Norms," Numerical Functional Analysis and Optimization, vol. 42, no. 6, pp. 679-695, 2021.
- A. Badoual, L. Romani, M. Unser, "Active Subdivision Surfaces for the Semiautomatic Segmentation of Biomedical Volumes," IEEE Transactions on Image Processing, vol. 30, pp. 5739-5753, 2021.
- J. Fageot, V. Uhlmann, Z. Püspöki, B. Beck, M. Unser, A. Depeursinge, "Principled Design and Implementation of Steerable Detectors," IEEE Transactions on Image Processing, vol. 30, pp. 4465-4478, 2021.
- H. Gupta, M.T. McCann, L. Donati, M. Unser, "CryoGAN: A New Reconstruction Paradigm for Single-Particle Cryo-EM via Deep Adversarial Learning," IEEE Transactions on Computational Imaging, vol. 7, pp. 759-774, 2021.
- F. Yang, T.-A. Pham, N. Brandenberg, M. Lütolf, J. Ma, M. Unser, "Robust Phase Unwrapping via Deep Image Prior for Quantitative Phase Imaging," IEEE Transactions on Image Processing, vol. 30, pp. 7025-7037, 2021.

Journals • 2020

- P. Bohra, J. Campos, H. Gupta, S. Aziznejad, M. Unser, "Learning Activation Functions in Deep (Spline) Neural Networks," IEEE Open Journal of Signal Processing, vol. 1, pp. 295-309, November 19, 2020.
- M. Unser, "A Note on BIBO Stability," IEEE Transactions on Signal Processing, vol. 68, pp. 5904-5913, September 21, 2020.
- S. Aziznejad, H. Gupta, J. Campos, M. Unser, "Deep Neural Networks with Trainable Activations and Controlled Lipschitz Constant," IEEE Transactions on Signal Processing, vol. 68, pp. 4688-4699, August 10, 2020.
- P. Bohra, M. Unser, "Continuous-Domain Signal Reconstruction Using
*L*_{p}-Norm Regularization," IEEE Transactions on Signal Processing, vol. 68, pp. 4543-4554, August 3, 2020. - L. Dadi, S. Aziznejad, M. Unser, "Generating Sparse Stochastic Processes Using Matched Splines," IEEE Transactions on Signal Processing, vol. 68, pp. 4397-4406, July 24, 2020.
- J. Fageot, V. Uhlmann, M. Unser, "Gaussian and Sparse Processes Are Limits of Generalized Poisson Processes," Applied and Computational Harmonic Analysis, vol. 48, no. 3, pp. 1045-1065, May 2020.
- J. Fageot, S. Aziznejad, M. Unser, V. Uhlmann, "Support and Approximation Properties of Hermite Splines," Journal of Computational and Applied Mathematics, vol. 368, paper no. 112503, pp. 1-15, April 2020.
- J. Fageot, M. Unser, J.P. Ward, "The
*n*-Term Approximation of Periodic Generalized Lévy Processes," Journal of Theoretical Probability, vol. 33, no. 1, pp. 180-200, March 2020. - V. Petrenko, N.R. Gandasi, D. Sage, A. Tengholm, S. Barg, C. Dibner, "In Pancreatic Islets from Type 2 Diabetes Patients, the Dampened Circadian Oscillators Lead to Reduced Insulin and Glucagon Exocytosis," Proceedings of the National Academy of Sciences of the United States of America, vol. 117, no. 5, pp. 2484-2495, February 4, 2020.
- F. Yang, T.-a. Pham, H. Gupta, M. Unser, J. Ma, "Deep-Learning Projector for Optical Diffraction Tomography," Optics Express, vol. 28, no. 3, pp. 3905-3921, February 3, 2020.
- A.B. Ayoub, T.-a. Pham, J. Lim, M. Unser, D. Psaltis, "A Method for Assessing the Fidelity of Optical Diffraction Tomography Reconstruction Methods Using Structured Illumination," Optics Communications, vol. 454, no. 124486, pp. 1-6, January 1, 2020.
- Q. Denoyelle, V. Duval, G. Peyré, E. Soubies, "The Sliding Frank-Wolfe Algorithm and Its Application to Super-Resolution Microscopy," Inverse Problems, vol. 36, no. 1, paper no. 014001, pp. 1-42, January 2020.
- S. Aziznejad, J. Fageot, "Wavelet Analysis of the Besov Regularity of Lévy White Noise," Electronic Journal of Probability, vol. 25, paper no. 158, pp. 1-38, 2020.
- P. del Aguila Pla, L. Pellaco, S. Dwivedi, P. Händel, J. Jaldén, "Clock Synchronization over Networks: Identifiability of the Sawtooth Model," IEEE Open Journal of Signal Processing, vol. 1, pp. 14-27, 2020.
- T.-a. Pham, E. Soubies, A. Ayoub, J. Lim, D. Psaltis, M. Unser, "Three-Dimensional Optical Diffraction Tomography with Lippmann-Schwinger Model," IEEE Transactions on Computational Imaging, vol. 6, pp. 727-738, 2020.
- A. Song, V. Uhlmann, J. Fageot, M. Unser, "Dictionary Learning for Two-Dimensional Kendall Shapes," SIAM Journal on Imaging Sciences, vol. 13, no. 1, pp. 141-175, 2020.
- M. Zehni, L. Donati, E. Soubies, Z. Zhao, M. Unser, "Joint Angular Refinement and Reconstruction for Single-Particle Cryo-EM," IEEE Transactions on Image Processing, vol. 29, pp. 6151-6163, 2020.

Journals • 2019

- M.T. McCann, M. Unser, "Biomedical Image Reconstruction: From the Foundations to Deep Neural Networks," Foundations and Trends
^{®}in Signal Processing, vol. 13, no. 3, pp. 280-359, December 3, 2019. - T. Debarre, S. Aziznejad, M. Unser, "Hybrid-Spline Dictionaries for Continuous-Domain Inverse Problems," IEEE Transactions on Signal Processing, vol. 67, no. 22, pp. 5824-5836, November 15, 2019.
- A. Badoual, M. Unser, A. Depeursinge, "Texture-Driven Parametric Snakes for Semi-Automatic Image Segmentation," Computer Vision and Image Understanding, vol. 188, paper no. 102793, pp. 1-11, November 2019.
- E. Soubies, F. Soulez, M.T. McCann, T.-a. Pham, L. Donati, T. Debarre, D. Sage, M. Unser, "Pocket Guide to Solve Inverse Problems with GlobalBioIm," Inverse Problems, vol. 35, no. 10, paper no. 104006, pp. 1-20, October 2019.
- J. Fageot, M. Unser, "Scaling Limits of Solutions of Linear Stochastic Differential Equations Driven by Lévy White Noises," Journal of Theoretical Probability, vol. 32, no. 3, pp 1166-1189, September 2019.
- J. Fageot, M. Unser, J.P. Ward, "Beyond Wiener's Lemma: Nuclear Convolution Algebras and the Inversion of Digital Filters," Journal of Fourier Analysis and Applications, vol. 25, no. 4, pp. 2037-2063, August 2019.
- T. Debarre, J. Fageot, H. Gupta, M. Unser, "B-Spline-Based Exact Discretization of Continuous-Domain Inverse Problems with Generalized TV Regularization," IEEE Transactions on Information Theory, vol. 65, no. 7, pp. 4457-4470, July 2019.
- H.Q. Nguyen, M. Unser, "Approximation of Non-Decaying Signals from Shift-Invariant Subspaces," Journal of Fourier Analysis and Applications, vol. 25, no. 3, pp. 633-660, June 2019.
- E. Soubies, M. Unser, "Computational Super-Sectioning for Single-Slice Structured-Illumination Microscopy," IEEE Transactions on Computational Imaging, vol. 5, no. 2, pp. 240-250, June 2019.
- D. Sage, T.-A. Pham, H. Babcock, T. Lukes, T. Pengo, J. Chao, R. Velmurugan, A. Herbert, A. Agrawal, S. Colabrese, A. Wheeler, A. Archetti, B. Rieger, R. Ober, G.M. Hagen, J.-B. Sibarita, J. Ries, R. Henriques, M. Unser, S. Holden, "Super-Resolution Fight Club: Assessment of 2D and 3D Single-Molecule Localization Microscopy Software," Nature Methods—Techniques for Life Scientists and Chemists, vol. 16, no. 5, pp. 387-395, May 2019.
- V. Andrearczyk, A. Depeursinge, H. Müller, "Neural Network Training for Cross-Protocol Radiomic Feature Standardization in Computed Tomography," Journal of Medical Imaging, vol. 6, no. 2, pp. 024008-1/024008-13, April-June 2019.
- D. Cherezov, D. Goldgof, L. Hall, R. Gillies, M. Schabath, H. Müller, A. Depeursinge, "Revealing Tumor Habitats from Texture Heterogeneity Analysis for Classification of Lung Cancer Malignancy and Aggressiveness," Scientific Reports, vol. 9, no. 4500, pp. 1-9, March 14, 2019.
- J. Castelli, A. Depeursinge, A. Devillers, B. Campillo-Gimenez, Y. Dicente, J.O. Prior, E. Chajon, F. Jegoux, C. Sire, O. Acosta, E. Gherga, X. Sun, B. De Bari, J. Bourhis, R. de Crevoisier, "PET-Based Prognostic Survival Model After Radiotherapy for Head and Neck Cancer," European Journal of Nuclear Medicine and Molecular Imaging, vol. 46, no. 3, pp. 638-649, March 2019.
- E. Soubies, A. Radwanska, D. Grall, L. Blanc-Féraud, E. Van Obberghen-Schilling, S. Schaub, "Nanometric Axial Resolution of Fibronectin Assembly Units Achieved with an Efficient Reconstruction Approach for Multi-Angle-TIRF Microscopy," Scientific Reports, vol. 9, no. 1926, pp. 1-10, February 13, 2019.
- D. Migliozzi, M. Cornaglia, L. Mouchiroud, V. Uhlmann, M.A. Unser, J. Auwerx, M.A.M. Gijs, "Multimodal Imaging and High-Throughput Image-Processing for Drug Screening on Living Organisms on-Chip," Journal of Biomedical Optics, vol. 24, no. 2, pp. 021205-1–021205-9, February 2019.
- A.I. Rahaghi, U. Lemmin, D. Sage, D.A. Barry, "Achieving High-Resolution Thermal Imagery in Low-Contrast Lake Surface Waters by Aerial Remote Sensing and Image Registration," Remote Sensing of Environment, vol. 221, pp. 773-783, February 2019.
- D. Gambarotto, F.U. Zwettler, M. Le Guennec, M. Schmidt-Cernohorska, D. Fortun, S. Borgers, J. Heine, J.-G. Schloetel, M. Reuss, M. Unser, E.S. Boyden, M. Sauer, V. Hamel, P. Guichard, "Imaging Cellular Ultrastructures Using Expansion Microscopy (U-ExM)," Nature Methods—Techniques for Life Scientists and Chemists, vol. 16, no. 1, pp. 71-81, January 2019.
- S. Arridge, M. de Hoop, P. Maass, O. Öktem, C. Schönlieb, M. Unser, "Deep Learning and Inverse Problems," Snapshots of Modern Mathematics from Oberwolfach, vol. 15, pp. 1-13, 2019.
- Z. Püspöki, J. Fageot, A. Amini, J.P. Ward, M. Unser, "Angular Accuracy of Steerable Feature Detectors," SIAM Journal on Imaging Sciences, vol. 12, no. 1, pp. 344-371, 2019.
- M. Unser, "A Representer Theorem for Deep Neural Networks," Journal of Machine Learning Research, vol. 20, no. 110, pp. 1-30, 2019.

Journals • 2018

- L. Donati, M. Nilchian, C.O.S. Sorzano, M. Unser, "Fast Multiscale Reconstruction for Cryo-EM," Journal of Structural Biology, vol. 204, no. 3, pp. 543-554, December 2018.
- A. Badoual, J. Fageot, M. Unser, "Periodic Splines and Gaussian Processes for the Resolution of Linear Inverse Problems," IEEE Transactions on Signal Processing, vol. 66, no. 22, pp. 6047-6061, November 15, 2018.
- D. Fortun, M. Storath, D. Rickert, A. Weinmann, M. Unser, "Fast Piecewise-Affine Motion Estimation Without Segmentation," IEEE Transactions on Image Processing, vol. 27, no. 11, pp. 5612-5624, November 2018.
- C.-L. Chen, L. Hermans, M.C. Viswanathan, D. Fortun, F. Aymanns, M. Unser, A. Cammarato, M.H. Dickinson, P. Ramdya, "Imaging Neural Activity in the Ventral Nerve Cord of Behaving Adult
*Drosophila*," Nature Communications, vol. 9, paper no. 4390, pp. 1-10, October 22, 2018. - J. Min, K.H. Jin, M. Unser, J.C. Ye, "Grid-Free Localization Algorithm Using Low-Rank Hankel Matrix for Super-Resolution Microscopy," IEEE Transactions on Image Processing, vol. 27, no. 10, pp. 4771-4786, October 2018.
- H. Gupta, J. Fageot, M. Unser, "Continuous-Domain Solutions of Linear Inverse Problems with Tikhonov
*versus*Generalized TV Regularization," IEEE Transactions on Signal Processing, vol. 66, no. 17, pp. 4670-4684, September 1, 2018. - A. Amini, R. Madani, M. Unser, "A Universal Formula for Generalized Cardinal B-Splines," Applied and Computational Harmonic Analysis, vol. 45, no. 2, pp. 341-358, September 2018.
- H. Gupta, K.H. Jin, H.Q. Nguyen, M.T. McCann, M. Unser, "CNN-Based Projected Gradient Descent for Consistent CT Image Reconstruction," IEEE Transactions on Medical Imaging, vol. 37, no. 6, pp. 1440-1453, June 2018.
- H. Choi, K.H. Jin, "Predicting Cognitive Decline with Deep Learning of Brain Metabolism and Amyloid Imaging," Behavioural Brain Research, vol. 344, pp. 103-109, May 15, 2018.
- D. Fortun, P. Guichard, V. Hamel, C.O.S. Sorzano, N. Banterle, P. Gönczy, M. Unser, "Reconstruction from Multiple Particles for 3D Isotropic Resolution in Fluorescence Microscopy," IEEE Transactions on Medical Imaging, vol. 37, no. 5, pp. 1235-1246, May 2018.
- N. Scher, J. Castelli, A. Depeursinge, J. Bourhis, J.O. Prior, F.G. Herrera, M. Ozsahin, "(
^{18}F)-FDG PET/CT Parameters to Predict Survival and Recurrence in Patients with Locally Advanced Cervical Cancer Treated with Chemoradiotherapy," Cancer/Radiothérapie, vol. 22, no. 3, pp. 229-235, May 2018. - M. Rostykus, F. Soulez, M. Unser, C. Moser, "Compact In-Line Lensfree Digital Holographic Microscope," Methods, vol. 136, pp. 17-23, March 1, 2018.
- K.H. Jin, J.C. Ye, "Sparse and Low-Rank Decomposition of a Hankel Structured Matrix for Impulse Noise Removal," IEEE Transactions on Image Processing, vol. 27, no. 3, pp. 1448-1461, March 2018.
- R. Joyseeree, H. Müller, A. Depeursinge, "Rotation-Covariant Tissue Analysis for Interstitial Lung Diseases Using Learned Steerable Filters: Performance Evaluation and Relevance for Diagnostic Aid," Computerized Medical Imaging and Graphics, vol. 64, pp. 1-11, March 2018.
- J. Lim, A. Goy, M.H. Shoreh, M. Unser, D. Psaltis, "Learning Tomography Assessed Using Mie Theory," Physical Review Applied, vol. 9, no. 3, pp. 034027-1–034027-14, March 2018.
- H.Q. Nguyen, E. Bostan, M. Unser, "Learning Convex Regularizers for Optimal Bayesian Denoising," IEEE Transactions on Signal Processing, vol. 66, no. 4, pp. 1093-1105, February 15, 2018.
- T.-a. Pham, E. Soubies, A. Goy, J. Lim, F. Soulez, D. Psaltis, M. Unser, "Versatile Reconstruction Framework for Diffraction Tomography with Intensity Measurements and Multiple Scattering," Optics Express, vol. 26, no. 3, pp. 2749-2763, February 5, 2018.
- V. Uhlmann, C. Haubold, F.A. Hamprecht, M. Unser, "DiversePathsJ: Diverse Shortest Paths for Bioimage Analysis," Bioinformatics, vol. 34, no. 3, pp. 538-540, February 1, 2018.
- A. Loddo, C. Di Ruberto, M. Kocher, "Recent Advances of Malaria Parasites Detection Systems Based on Mathematical Morphology," Sensors, vol. 18, no. 2, paper no. 513, pp. 1-21, February 2018.
- D. Schmitter, M. Unser, "Landmark-Based Shape Encoding and Sparse-Dictionary Learning in the Continuous Domain," IEEE Transactions on Image Processing, vol. 27, no. 1, pp. 365-378, January 2018.

Journals • 2017

- H. Deschout, I. Platzman, D. Sage, L. Feletti, J.P. Spatz, A. Radenovic, "Investigating Focal Adhesion Substructures by Localization Microscopy," Biophysical Journal, vol. 113, no. 11, pp. 2508-2518, December 5, 2017.
- R. Schorer, A. Badoual, B. Bastide, A. Vandebrouck, M. Licker, D. Sage, "A Feasability Study of Color Flow Doppler Vectorization for Automated Blood Flow Monitoring," Journal of Clinical Monitoring and Computing, vol. 31, no. 6, pp. 1167-1175, December 2017.
- M. Unser, J. Fageot, J.P. Ward, "Splines Are Universal Solutions of Linear Inverse Problems with Generalized TV Regularization," SIAM Review, vol. 59, no. 4, pp. 769-793, December 2017.
- A. Badoual, P. Novara, L. Romani, D. Schmitter, M. Unser, "A Non-Stationary Subdivision Scheme for the Construction of Deformable Models with Sphere-Like Topology," Graphical Models, vol. 94, pp. 38-51, November 2017.
- M.T. McCann, K.H. Jin, M. Unser, "Convolutional Neural Networks for Inverse Problems in Imaging—A Review," IEEE Signal Processing Magazine, vol. 34, no. 6, pp. 85-95, November 2017.
- D. Schmitter, J. Fageot, A. Badoual, P. Garcia-Amorena, M. Unser, "Compactly-Supported Smooth Interpolators for Shape Modeling with Varying Resolution," Graphical Models, vol. 94, pp. 52-64, November 2017.
- M.T. McCann, M. Unser, "High-Quality Parallel-Ray x-Ray CT Back Projection Using Optimized Interpolation," IEEE Transactions on Image Processing, vol. 26, no. 10, pp. 4639-4647, October 2017.
- D. Schmitter, M. Unser, "Shape Projectors for Landmark-Based Spline Curves," IEEE Signal Processing Letters, vol. 24, no. 10, pp. 1517-1521, October 2017.
- M. Storath, D. Rickert, M. Unser, A. Weinmann, "Fast Segmentation from Blurred Data in 3D Fluorescence Microscopy," IEEE Transactions on Image Processing, vol. 26, no. 10, pp. 4856-4870, October 2017.
- E. Soubies, T.-A. Pham, M. Unser, "Efficient Inversion of Multiple-Scattering Model for Optical Diffraction Tomography," Optics Express, vol. 25, no. 8, pp. 21786-21800, September 4, 2017.
- K.H. Jin, M.T. McCann, E. Froustey, M. Unser, "Deep Convolutional Neural Network for Inverse Problems in Imaging," IEEE-SPS best paper award, IEEE Transactions on Image Processing, vol. 26, no. 9, pp. 4509-4522, September 2017.
- P. Pad, K. Alishahi, M. Unser, "Optimized Wavelet Denoising for Self-Similar α-Stable Processes," IEEE Transactions on Information Theory, vol. 63, no. 9, pp. 5529-5543, September 2017.
- D. Schmitter, P. García-Amorena, M. Unser, "Smooth Shapes with Spherical Topology: Beyond Traditional Modeling, Efficient Deformation, and Interaction," Computational Visual Media, vol. 3, no. 3, pp. 199-215, September 2017.
- M. Storath, A. Weinmann, M. Unser, "Jump-Penalized Least Absolute Values Estimation of Scalar or Circle-Valued Signals," Information and Inference: A Journal of the IMA, vol. 6, no. 3, pp. 225-245, September 2017.
- L. Donati, M. Nilchian, S. Trépout, C. Messaoudi, S. Marco, M. Unser, "Compressed Sensing for STEM Tomography," Ultramicroscopy, vol. 179, pp. 47-56, August 2017.
- H.Q. Nguyen, M. Unser, "A Sampling Theory for Non-Decaying Signals," Applied and Computational Harmonic Analysis, vol. 43, no. 1, pp. 76-93, July 2017.
- J. Castelli, A. Depeursinge, B. de Bari, A. Devillers, R. de Crevoisier, J. Bourhis, J.O. Prior, "Metabolic Tumor Volume and Total Lesion Glycolysis in Oropharyngeal Cancer Treated with Definitive Radiotherapy—Which Threshold Is the Best Predictor of Local Control?," Clinical Nuclear Medicine, vol. 42, no. 6, pp. e281-e285, June 2017.
- J. Fageot, A. Fallah, M. Unser, "Multidimensional Lévy White Noise in Weighted Besov Spaces," Stochastic Processes and Their Applications, vol. 127, no. 5, pp. 1599-1621, May 2017.
- V. Uhlmann, P. Ramdya, R. Delgado-Gonzalo, R. Benton, M. Unser, "FlyLimbTracker: An Active Contour Based Approach for Leg Segment Tracking in Unmarked, Freely Behaving
*Drosophila*," PLoS ONE, vol. 12, no. 4, pp. 1-21, April 28, 2017. - J. Castelli, A. Depeursinge, V. Ndoh, J.O. Prior, M. Ozsahin, A. Devillers, H. Bouchaab, E. Chajon, R. de Crevoisier, N. Scher, F. Jegoux, B. Laguerre, B. De Bari, J. Bourhis, "A PET-Based Nomogram for Oropharyngeal Cancers," European Journal of Cancer, vol. 75, pp. 222-230, April 2017.
- Y.D. Cid, H. Müller, A. Platon, P.-A. Poletti, A. Depeursinge, "3D Solid Texture Classification Using Locally-Oriented Wavelet Transforms," IEEE Transactions on Image Processing, vol 26, no. 4, pp. 1899-1910, April 2017.
- A. Depeursinge, Z. Püspöki, J.P. Ward, M. Unser, "Steerable Wavelet Machines (SWM): Learning Moving Frames for Texture Classification," IEEE Transactions on Image Processing, vol. 26, no. 4, pp. 1626-1636, April 2017.
- H.Q. Nguyen, M. Unser, J.P. Ward, "Generalized Poisson Summation Formulas for Continuous Functions of Polynomial Growth," The Journal of Fourier Analysis and Applications, vol. 23, no. 2, pp. 442-461, April 2017.
- A. Badoual, D. Schmitter, V. Uhlmann, M. Unser, "Multiresolution Subdivision Snakes," IEEE Transactions on Image Processing, vol. 26, no. 3, pp. 1188-1201, March 2017.
- B. Lazareff, J.-P. Berger, J. Kluska, J.-B. Le Bouquin, M. Benisty, F. Malbet, C. Koen, C. Pinte, W.-F. Thi, O. Absil, F. Baron, A. Delboulbé, G. Duvert, A. Isella, L. Jocou, A. Juhasz, S. Kraus, R. Lachaume, F. Ménard, R. Millan-Gabet, J.D. Monnier, T. Moulin, K. Perraut, S. Rochat, F. Soulez, M. Tallon, É. Thiébaut, W. Traub, G. Zins, "Structure of Herbig AeBe Disks at the milliarcsecond Scale—A Statistical Survey in the
*H*Band Using PIONIER-VLTI," Astronomy & Astrophysics, Worldwide Astronomical and Astrophysical Research, vol. 599, paper no. A85, pp. 1-41, March 2017. - M. Storath, L. Demaret, P. Massopust, "Signal Analysis Based on Complex Wavelet Signs," Applied and Computational Harmonic Analysis, vol. 42, no. 2, pp. 199-223, March 2017.
- M. Rostykus, F. Soulez, M. Unser, C. Moser, "Compact Lensless Phase Imager," Optics Express, vol. 25, no. 4, pp. 4438-4445, February 20, 2017.
- V. Petrenko, C. Saini, L. Giovannoni, C. Gobet, D. Sage, M. Unser, M.H. Masson, G. Gu, D. Bosco, F. Gachon, J. Philippe, C. Dibner, "Pancreatic α- and β-Cellular Clocks Have Distinct Molecular Properties and Impact on Islet Hormone Secretion and Gene Expression," Genes & Development, vol. 31, no. 4, pp. 383-398, February 15, 2017.
- D. Sage, L. Donati, F. Soulez, D. Fortun, G. Schmit, A. Seitz, R. Guiet, C. Vonesch, M. Unser, "DeconvolutionLab2: An Open-Source Software for Deconvolution Microscopy," Methods—Image Processing for Biologists, vol. 115, pp. 28-41, February 15, 2017.
- J.C. Ye, J.M. Kim, K.H. Jin, K. Lee, "Compressive Sampling Using Annihilating Filter-Based Low-Rank Interpolation," IEEE Transactions on Information Theory, vol. 63, no. 2, pp. 777-801, February 2017.
- K. Wasmer, P.-M. Pochon, D. Sage, J.H. Giovanola, "Parametric Experimental Study and Design of Experiment Modelling of Sapphire Grinding," Journal of Cleaner Production, vol. 141, pp. 323-335, January 10, 2017.
- J. Fageot, M. Unser, J.P. Ward, "On the Besov Regularity of Periodic Lévy Noises," Applied and Computational Harmonic Analysis, vol. 42, no, 1, pp. 21-36, January 2017.
- S. Rangan, A.K. Fletcher, P. Schniter, U.S. Kamilov, "Inference for Generalized Linear Models via Alternating Directions and Bethe Free Energy Minimization," IEEE Transactions on Information Theory, vol. 63, no. 1, pp. 676-697, January 2017.

Journals • 2016

- H. Choi, K.H. Jin, "Fast and Robust Segmentation of the Striatum Using Deep Convolutional Neural Networks," Journal of Neuroscience Methods, vol. 274, pp. 146-153, December 1, 2016.
- J. Castelli, B. De Bari, A. Depeursinge, A. Simon, A. Devillers, G.R. Jimenez, J. Prior, M. Ozsahin, R. de Crevoisier, J. Bourhis, "Overview of the Predictive Value of Quantitative 18 FDG PET in Head and Neck Cancer Treated with Chemoradiotherapy," Critical Reviews in Oncology/Hematology, vol. 108, pp. 40-51, December 2016.
- P. Cirujeda, Y.D. Cid, H. Müller, D. Rubin, T.A. Aguilera, B.W. Loo Jr., M. Diehn, X. Binefa, A. Depeursinge, "A 3-D Riesz-Covariance Texture Model for Prediction of Nodule Recurrence in Lung CT," IEEE Transactions on Medical Imaging, vol. 35, no. 12, pp. 2620-2630, December 2016.
- K.H. Jin, D. Lee, J.C. Ye, "A General Framework for Compressed Sensing and Parallel MRI Using Annihilating Filter Based Low-Rank Hankel Matrix," IEEE Transactions on Computational Imaging, vol. 2, no. 4, pp. 480-495, December 2016.
- V. Uhlmann, S. Singh, A.E. Carpenter, "CP-CHARM: Segmentation-Free Image Classification Made Accessible," BMC Bioinformatics, vol. 17, no. 1, paper no. 51, December 2016.
- B. Meylan, P. Dogan, D. Sage, K. Wasmer, "A Simple, Fast and Low-Cost Method for
*in situ*Monitoring of Topographical Changes and Wear Rate of a Complex Tribo-System Under Mixed Lubrication," Wear—An International Journal on the Science and Technology of Friction, Lubrication and Wear, vol. 364-365, pp. 22-30, October 15, 2016. - D. Fortun, P. Bouthemy, C. Kervrann, "A Variational Aggregation Framework for Patch-Based Optical Flow Estimation," Journal of Mathematical Imaging and Vision, vol. 56, no. 2, pp. 280-299, October 2016.
- F. Soulez, É. Thiébaut, A. Schutz, A. Ferrari, F. Courbin, M. Unser, "Proximity Operators for Phase Retrieval," Applied Optics, vol. 55, no. 26, pp. 7412-7421, September 10, 2016.
- M. Unser, J. Fageot, H. Gupta, "Representer Theorems for Sparsity-Promoting ℓ
_{1}Regularization," IEEE Transactions on Information Theory, vol. 62, no. 9, pp. 5167-5180, September 2016. - J. Kluska, M. Benisty, F. Soulez, J.-P. Berger, J.-B. Le Bouquin, F. Malbet, B. Lazareff, É. Thiébaut, "A Disk Asymmetry in Motion Around the B[e] Star MWC158," Astronomy & Astrophysics, vol. 591, paper no. A82, July 2016.
- A. Weinmann, L. Demaret, M. Storath, "Mumford-Shah and Potts Regularization for Manifold-Valued Data," Journal of Mathematical Imaging and Vision, vol. 55, no. 3, pp. 428-445, July 2016.
- M.T. McCann, M. Nilchian, M. Stampanoni, M. Unser, "Fast 3D Reconstruction Method for Differential Phase Contrast x-Ray CT," Optics Express, vol. 24, no. 13, pp. 14564-14581, June 27, 2016.
- A. Badoual, D. Schmitter, M. Unser, "An Inner-Product Calculus for Periodic Functions and Curves," IEEE Signal Processing Letters, vol. 23, no. 6, pp. 878-882, June 2016.
- R. Schaer, H. Müller, A. Depeursinge, "Optimized Distributed Hyperparameter Search and Simulation for Lung Texture Classification in CT Using Hadoop," Journal of Imaging, vol. 2, no. 2, pp. 1-20, June 2016.
- V. Uhlmann, J. Fageot, M. Unser, "Hermite Snakes with Control of Tangents," IEEE Transactions on Image Processing, vol. 25, no. 6, pp. 2803-2816, June 2016.
- J. Barker, A. Hoogi, A. Depeursinge, D.L. Rubin, "Automated Classification of Brain Tumor Type in Whole-Slide Digital Pathology Images Using Local Representative Tiles," Medical Image Analysis, vol. 30, pp. 60-71, May 2016.
- P. Pad, V. Uhlmann, M. Unser, "Maximally Localized Radial Profiles for Tight Steerable Wavelet Frames," IEEE Transactions on Image Processing, vol. 25, no. 5, pp. 2275-2287, May 2016.
- Z. Püspöki, D. Sage, J.P. Ward, M. Unser, "SpotCaliper: Fast Wavelet-Based Spot Detection with Accurate Size Estimation," Bioinformatics, vol. 32, no. 8, pp. 1278-1280, April 15, 2016.
- F. Arcadu, M. Nilchian, A. Studer, M. Stampanoni, F. Marone, "A Forward Regridding Method with Minimal Oversampling for Accurate and Efficient Iterative Tomographic Algorithms," IEEE Transactions on Image Processing, vol. 25, no. 3, pp. 1207-1218, March 2016.
- S. Holden, D. Sage, "Super-Resolution Fight Club," Nature Photonics, vol. 10, no. 3, pp. 152-153, March 2016.
- U.S. Kamilov, I.N. Papadopoulos, M.H. Shoreh, A. Goy, C. Vonesch, M. Unser, D. Psaltis, "Optical Tomographic Image Reconstruction Based on Beam Propagation and Sparse Regularization," IEEE Transactions on Computational Imaging, vol. 2, no. 1, pp. 59-70, March 2016.
- E. Bostan, E. Froustey, M. Nilchian, D. Sage, M. Unser, "Variational Phase Imaging Using the Transport-of-Intensity Equation," IEEE Transactions on Image Processing, vol. 25, no. 2, pp. 807-817, February 2016.
- D. Fortun, P. Guichard, N. Chu, M. Unser, "Reconstruction from Multiple Poses in Fluorescence Imaging: Proof of Concept," IEEE Journal of Selected Topics in Signal Processing, vol. 10, no. 1, pp. 61-70, February 2016.
- C. Kervrann, S.T. Acton, J.-C. Olivo-Marin, C.Ó.S. Sorzano, M. Unser, "Introduction to the Issue on Advanced Signal Processing in Microscopy and Cell Imaging," IEEE Journal of Selected Topics in Signal Processing, vol. 10, no. 1, pp. 1-3, February 2016.
- C. Kervrann, C.Ó.S. Sorzano, S.T. Acton, J.-C. Olivo-Marin, M. Unser, "A Guided Tour of Selected Image Processing and Analysis Methods for Fluorescence and Electron Microscopy," IEEE Journal of Selected Topics in Signal Processing, vol. 10, no. 1, pp. 6-30, February 2016.
- Z. Püspöki, V. Uhlmann, C. Vonesch, M. Unser, "Design of Steerable Wavelets to Detect Multifold Junctions," IEEE Transactions on Image Processing, vol. 25, no. 2, pp. 643-657, February 2016.
- D. Schmitter, R. Delgado-Gonzalo, M. Unser, "A Family of Smooth and Interpolatory Basis Functions for Parametric Curve and Surface Representation," Applied Mathematics and Computation, vol. 272, no. 1, pp. 53-63, January 1, 2016.
- Z. Püspöki, J.P. Ward, D. Sage, M. Unser, "On the Continuous Steering of the Scale of Tight Wavelet Frames," SIAM Journal on Imaging Sciences, vol. 9, no. 3, pp. 1042-1062, 2016.
- M. Storath, A. Weinmann, M. Unser, "Exact Algorithms for
*L*^{1}-TV Regularization of Real-Valued or Circle-Valued Signals," SIAM Journal on Scientific Computing, vol. 38, no. 1, pp A614-A630, 2016.

Journals • 2015

- R. Delgado-Gonzalo, D. Schmitter, V. Uhlmann, M. Unser, "Efficient Shape Priors for Spline-Based Snakes," IEEE Transactions on Image Processing, vol. 24, no. 11, pp. 3915-3926, November 2015.
- K. Hohm, M. Storath, A. Weinmann, "An Algorithmic Framework for Mumford-Shah Regularization of Inverse Problems in Imaging," Inverse Problems, vol. 31, no. 11, paper no. 115011, November 2015.
- M. Nilchian, J.P. Ward, C. Vonesch, M. Unser, "Optimized Kaiser-Bessel Window Functions for Computed Tomography," IEEE Transactions on Image Processing, vol. 24, no. 11, pp. 3826-3833, November 2015.
- D. Schmitter, R. Delgado-Gonzalo, M. Unser, "Trigonometric Interpolation Kernel to Construct Deformable Shapes for User-Interactive Applications," IEEE Signal Processing Letters, vol. 22, no. 11, pp. 2097-2101, November 2015.
- J.P. Ward, P. Pad, M. Unser, "Optimal Isotropic Wavelets for Localized Tight Frame Representations," IEEE Signal Processing Letters, vol. 22, no. 11, pp. 1918-1921, November 2015.
- Z. Püspöki, M. Unser, "Template-Free Wavelet-Based Detection of Local Symmetries," IEEE Transactions on Image Processing, vol. 24, no. 10, pp. 3009-3018, October 2015.
- P. Pad, M. Unser, "Optimality of Operator-Like Wavelets for Representing Sparse AR(1) Processes," IEEE Transactions on Signal Processing, vol. 63, no. 18, pp. 4827-4837, September 15, 2015.
- E. Bostan, M. Unser, J.P. Ward, "Divergence-Free Wavelet Frames," IEEE Signal Processing Letters, vol. 22, no. 8, pp. 1142-1145, August 2015.
- D. Sage, H. Kirshner, T. Pengo, N. Stuurman, J. Min, S. Manley, M. Unser, "Quantitative Evaluation of Software Packages for Single-Molecule Localization Microscopy," Nature Methods—Techniques for Life Scientists and Chemists, vol. 12, no. 8, pp. 717-724, August 2015.
- C. Conti, L. Romani, M. Unser, "Ellipse-Preserving Hermite Interpolation and Subdivision," Journal of Mathematical Analysis and Applications, vol. 426, no. 1, pp. 211-227, June 1, 2015.
- E. Bostan, S. Lefkimmiatis, O. Vardoulis, N. Stergiopulos, M. Unser, "Improved Variational Denoising of Flow Fields with Application to Phase-Contrast MRI Data," IEEE Signal Processing Letters, vol. 22, no. 6, pp. 762-766, June 2015.
- U.S. Kamilov, I.N. Papadopoulos, M.H. Shoreh, A. Goy, C. Vonesch, M. Unser, D. Psaltis, "Learning Approach to Optical Tomography," Optica, vol. 2, no. 6, pp. 517-522, June 2015.
- U.S. Kamilov, I.N. Papadopoulos, M.H. Shoreh, D. Psaltis, M. Unser, "Isotropic Inverse-Problem Approach for Two-Dimensional Phase Unwrapping," Journal of the Optical Society of America A, vol. 32, no. 6, pp. 1092-1100, June 2015.
- D. Fortun, P. Bouthemy, C. Kervrann, "Optical Flow Modeling and Computation: A Survey," Computer Vision and Image Understanding, vol. 134, pp. 1-21, May 2015.
- M. Nilchian, Z. Wang, T. Thuering, M. Unser, M. Stampanoni, "Spline Based Iterative Phase Retrieval Algorithm for x-Ray Differential Phase Contrast Radiography," Optics Express, vol. 23, no. 8, pp. 10631-10642, April 20, 2015.
- D. Sierociuk, T. Skovranek, M. Macias, I. Podlubny, I. Petras, A. Dzielinski, P. Ziubinski, "Diffusion Process Modeling by Using Fractional-Order Models," Applied Mathematics and Computation, vol. 257, pp. 2-11, April 15, 2015.
- A. Weinmann, M. Storath, "Iterative Potts and Blake-Zisserman Minimization for the Recovery of Functions with Discontinuities from Indirect Measurements," Proceedings of The Royal Society of London A: Mathematical, Physical and Engineering Sciences, vol. 471, no. 2176, paper no. 20140638, April 2015.
- X. Cai, J.H. Fitschen, M. Nikolova, G. Steidl, M. Storath, "Disparity and Optical Flow Partitioning Using Extended Potts Priors," Information and Inference: A Journal of the IMA, vol. 4, no. 1, pp. 43-62, March 2015.
- P. Wachowicz, A. Chasapi, A. Krapp, E.C. del Rosario, D. Schmitter, D. Sage, M. Unser, I. Xenarios, J. Rougemont, V. Simanis, "Analysis of
*S. pombe*SIN Protein Association to the SPB Reveals Two Genetically Separable States of the SIN," Journal of Cell Science, vol. 128, no. 4, pp. 741-754, February 15, 2015. - J. Vaubourgeix, G. Lin, N. Dhar, N. Chenouard, X. Jiang, H. Botella, T. Lupoli, O. Mariani, G. Yang, O. Ouerfelli, M. Unser, D. Schnappinger, J. McKinney, C. Nathan, "Stressed Mycobacteria Use the Chaperone ClpB to Sequester Irreversibly Oxidized Proteins Asymmetrically Within and Between Cells," Cell Host & Microbe, vol. 17, no. 2, pp. 178-190, February 11, 2015.
- M. Storath, A. Weinmann, J. Frikel, M. Unser, "Joint Image Reconstruction and Segmentation Using the Potts Model," Inverse Problems, vol. 31, no. 2, paper no. 025003, February 2015.
- H.Q. Nguyen, M.N. Do, "Downsampling of Signals on Graphs via Maximum Spanning Trees," IEEE Transactions on Signal Processing, vol. 63, no. 1, pp. 182-191, January 1, 2015.
- R. Delgado-Gonzalo, V. Uhlmann, D. Schmitter, M. Unser, "Snakes on a Plane: A Perfect Snap for Bioimage Analysis," IEEE Signal Processing Magazine, vol. 32, no. 1, pp. 41-48, January 2015.
- J. Fageot, E. Bostan, M. Unser, "Wavelet Statistics of Sparse and Self-Similar Images," SIAM Journal on Imaging Sciences, vol. 8, no. 4, pp. 2951-2975, 2015.
- C. Granziera, A. Daducci, A. Donati, G. Bonnier, D. Romascano, A. Roche, M. Bach Cuadra, D. Schmitter, S. Klöppel, R. Meuli, A. von Gunten, G. Krueger, "A Multi-Contrast MRI Study of Microstructural Brain Damage in Patients with Mild Cognitive Impairment," NeuroImage: Clinical, vol. 8, pp. 631-639, 2015.
- M. Lee, Y. Han, J.P. Ward, M. Unser, J.C. Ye, "Interior Tomography Using 1D Generalized Total Variation. Part II: Multiscale Implementation," SIAM Journal on Imaging Sciences, vol. 8, no. 4, pp. 2452-2486, 2015.
- S. Lefkimmiatis, A. Roussos, P. Maragos, M. Unser, "Structure Tensor Total Variation," SIAM Journal on Imaging Sciences, vol. 8, no. 2, pp. 1090-1122, 2015.
- D. Schmitter, A. Roche, B. Maréchal, D. Ribes, A. Abdulkadir, M. Bach Cuadra, A. Daducci, C. Granziera, S. Klöppel, P. Maeder, R. Meuli, G. Krueger, "An Evaluation of Volume-Based Morphometry for Prediction of Mild Cognitive Impairment and Alzheimer's Disease," NeuroImage: Clinical, vol. 7, pp. 7-17, 2015.
- C. Vonesch, F. Stauber, M. Unser, "Steerable PCA for Rotation-Invariant Image Recognition," SIAM Journal on Imaging Sciences, vol. 8, no. 3, pp. 1857-1873, 2015.
- J.P. Ward, M. Lee, J.C. Ye, M. Unser, "Interior Tomography Using 1D Generalized Total Variation. Part I: Mathematical Foundation," SIAM Journal on Imaging Sciences, vol. 8, no. 1, pp. 226-247, 2015.
- A. Weinmann, M. Storath, L. Demaret, "The
*L*^{1}-Potts Functional for Robust Jump-Sparse Reconstruction," SIAM Journal on Numerical Analysis, vol. 53, no. 1, pp. 644-673, 2015.

Journals • 2014

- J. Fageot, A. Amini, M. Unser, "On the Continuity of Characteristic Functionals and Sparse Stochastic Modeling," The Journal of Fourier Analysis and Applications, vol. 20, no. 6, pp. 1179-1211, December 2014.
- H.Q. Nguyen, M.N. Do, "Inverse Rendering of Lambertian Surfaces Using Subspace Methods," IEEE Transactions on Image Processing, vol. 23, no. 12, pp. 5545-5558, December 2014.
- J. Min, S.J. Holden, L. Carlini, M. Unser, S. Manley, J.C. Ye, "3D High-Density Localization Microscopy Using Hybrid Astigmatic/Biplane Imaging and Sparse Image Reconstruction," Biomedical Optics Express, vol. 5, no. 11, pp. 3935-3948, November 1, 2014.
- U.S. Kamilov, E. Bostan, M. Unser, "Variational Justification of Cycle Spinning for Wavelet-Based Solutions of Inverse Problems," IEEE Signal Processing Letters, vol. 21, no. 11, pp. 1326-1330, November 2014.
- M. Unser, "Wavelets: On the Virtues and Applications of the Mathematical Microscope," Journal of Microscopy, vol. 255, no. 3, pp. 123-127, September 2014.
- D. Wüstner, T. Christensen, L.M. Solanko, D. Sage, "Photobleaching Kinetics and Time-Integrated Emission of Fluorescent Probes in Cellular Membranes," Molecules, vol. 19, no. 8, pp. 11096-11130, August 2014.
- M. Storath, A. Weinmann, L. Demaret, "Jump-Sparse and Sparse Recovery Using Potts Functionals," IEEE Transactions on Signal Processing, vol. 62, no. 14, pp. 3654-3666, July 15, 2014.
- C.C. Reyes, M. Jin, E.B. Breznau, R. Espino, R. Delgado-Gonzalo, A.B. Goryachev, A.L. Miller, "Anillin Regulates Cell-Cell Junction Integrity by Organizing Junctional Accumulation of Rho-GTP and Actomyosin," Current Biology, vol. 24, no. 11, pp. 1263-1270, June 2, 2014.
- M. Unser, P.D. Tafti, A. Amini, H. Kirshner, "A Unified Formulation of Gaussian
*versus*Sparse Stochastic Processes—Part II: Discrete-Domain Theory," IEEE Transactions on Information Theory, vol. 60, no. 5, pp. 3036-3051, May 2014. - U.S. Kamilov, S. Rangan, A.K. Fletcher, M. Unser, "Approximate Message Passing with Consistent Parameter Estimation and Applications to Sparse Learning," IEEE Transactions on Information Theory, vol. 60, no. 5, pp. 2969-2985, May 2014.
- J. Min, C. Vonesch, H. Kirshner, L. Carlini, N. Olivier, S. Holden, S. Manley, J.C. Ye, M. Unser, "FALCON: Fast and Unbiased Reconstruction of High-Density Super-Resolution Microscopy Data," Scientific Reports, vol. 4, no. 4577, pp. 1-9, April 3, 2014.
- A. Amini, M. Unser, "Sparsity and Infinite Divisibility," IEEE Transactions on Information Theory, vol. 60, no. 4, pp. 2346-2358, April 2014.
- H. Kirshner, M. Unser, J.P. Ward, "On the Unique Identification of Continuous-Time Autoregressive Models from Sampled Data," IEEE Transactions on Signal Processing, vol. 62, no. 6, pp. 1361-1376, March 15, 2014.
- N. Chenouard, I. Smal, F. de Chaumont, M. Maška, I.F. Sbalzarini, Y. Gong, J. Cardinale, C. Carthel, S. Coraluppi, M. Winter, A.R. Cohen, W.J. Godinez, K. Rohr, Y. Kalaidzidis, L. Liang, J. Duncan, H. Shen, Y. Xu, K.E.G. Magnusson, J. Jaldén, H.M. Blau, P. Paul-Gilloteaux, P. Roudot, C. Kervrann, F. Waharte, J.-Y. Tinevez, S.L. Shorte, J. Willemse, K. Celler, G.P. van Wezel, H.-W. Dan, Y.-S. Tsai, C. Ortiz de Solórzano, J.-C. Olivo-Marin, E. Meijering, "Objective Comparison of Particle Tracking Methods," Nature Methods—Techniques for Life Scientists and Chemists, vol. 11, no. 3, pp. 281-290, March 2014.
- M. Unser, P.D. Tafti, Q. Sun, "A Unified Formulation of Gaussian
*versus*Sparse Stochastic Processes—Part I: Continuous-Domain Theory," IEEE Transactions on Information Theory, vol. 60, no. 3, pp. 1945-1962, March 2014. - J.P. Ward, M. Unser, "Harmonic Singular Integrals and Steerable Wavelets in
*L*_{2}(ℝ^{d})," Applied and Computational Harmonic Analysis, vol. 36, no. 2, pp. 183-197, March 2014. - H. Kirshner, A. Bourquard, J.P. Ward, M. Porat, M. Unser, "Adaptive Image Resizing Based on Continuous-Domain Stochastic Modeling," IEEE Transactions on Image Processing, vol. 23, no. 1, pp. 413-423, January 2014.
- M. Storath, A. Weinmann, "Fast Partitioning of Vector-Valued Images," SIAM Journal on Imaging Sciences, vol. 7, no. 3, pp. 1826-1852, 2014.
- J.P. Ward, M. Unser, "Approximation Properties of Sobolev Splines and the Construction of Compactly Supported Equivalents," SIAM Journal on Mathematical Analysis, vol. 46, no. 3, pp. 1843-1858, 2014.
- A. Weinmann, L. Demaret, M. Storath, "Total Variation Regularization for Manifold-Valued Data," SIAM Journal on Imaging Sciences, vol. 7, no. 4, pp. 2226-2257, 2014.

Journals • 2013

- M. Nilchian, C. Vonesch, S. Lefkimmiatis, P. Modregger, M. Stampanoni, M. Unser, "Constrained Regularized Reconstruction of x-Ray-DPCI Tomograms with Weighted-Norm," Optics Express, vol. 21, no. 26, pp. 32340-32348, December 30, 2013.
- P.R. Thompson, G.T. Mitchum, C. Vonesch, J. Li, "Variability of Winter Storminess in the Eastern United States during the Twentieth Century from Tide Gauges," Journal of Climate, vol. 26, no. 23, pp. 9713-9726, December 1, 2013.
- I. Khalidov, M. Unser, J.P. Ward, "Operator-Like Wavelet Bases of
*L*_{2}(ℝ^{d})," The Journal of Fourier Analysis and Applications, vol. 19, no. 6, pp. 1294-1322, December 2013. - S. Lefkimmiatis, M. Unser, "Poisson Image Reconstruction with Hessian Schatten-Norm Regularization," IEEE Transactions on Image Processing, vol 22, no. 11, pp. 4314-4327, November 2013.
- T. Mannic, P. Meyer, F. Triponez, M. Pusztaszeri, G. Le Martelot, O. Mariani, D. Schmitter, D. Sage, J. Philippe, C. Dibner, "Circadian Clock Characteristics Are Altered in Human Thyroid Malignant Nodules," The Journal of Clinical Endocrinology & Metabolism, vol. 98, no. 11, pp. 4446-4456, November 2013.
- R. Delgado-Gonzalo, N. Chenouard, M. Unser, "Spline-Based Deforming Ellipsoids for Interactive 3D Bioimage Segmentation," IEEE Transactions on Image Processing, vol. 22, no. 10, pp. 3926-3940, October 2013.
- N. Dénervaud, J. Becker, R. Delgado-Gonzalo, P. Damay, A.S. Rajkumar, M. Unser, D. Shore, F. Naef, S.J. Maerki, "A Chemostat Array Enables the Spatio-Temporal Analysis of the Yeast Proteome," Proceedings of the National Academy of Sciences of the United States of America, vol. 110, no. 39, pp. 15842-15847, September 24, 2013.
- A. Amini, P. Thévenaz, J.P. Ward, M. Unser, "On the Linearity of Bayesian Interpolators for Non-Gaussian Continuous-Time AR(1) Processes," IEEE Transactions on Information Theory, vol. 59. no. 8, pp. 5063-5074, August 2013.
- A.S. Goy, M. Unser, D. Psaltis, "Multiple Contrast Metrics from the Measurements of a Digital Confocal Microscope," Biomedical Optics Express, vol. 4 , no. 7, pp. 1091-1103, July 1, 2013.
- E. Bostan, U.S. Kamilov, M. Nilchian, M. Unser, "Sparse Stochastic Processes and Discretization of Linear Inverse Problems," IEEE Transactions on Image Processing, vol. 22, no. 7, pp. 2699-2710, July 2013.
- R. Delgado-Gonzalo, M. Unser, "Spline-Based Framework for Interactive Segmentation in Biomedical Imaging," IRBM—Ingénierie et Recherche Biomédicale / BioMedical Engineering and Research, vol. 34, no. 3, pp. 235-243, June 2013.
- S. Lefkimmiatis, J.P. Ward, M. Unser, "Hessian Schatten-Norm Regularization for Linear Inverse Problems," IEEE Transactions on Image Processing, vol. 22, no. 5, pp. 1873-1888, May 2013.
- D. Schmitter, P. Wachowicz, D. Sage, A. Chasapi, I. Xenarios, V. Simanis, M. Unser, "A 2D/3D Image Analysis System to Track Fluorescently Labeled Structures in Rod-Shaped Cells: Application to Measure Spindle Pole Asymmetry During Mitosis," Cell Division, vol. 8, no. 6, pp. 1-13, April 27, 2013.
- M. Nilchian, C. Vonesch, P. Modregger, M. Stampanoni, M. Unser, "Fast Iterative Reconstruction of Differential Phase Contrast x-Ray Tomograms," Optics Express, vol. 21, no. 5, pp. 5511-5528, March 11, 2013.
- A. Bourquard, M. Unser, "Binary Compressed Imaging," IEEE Transactions on Image Processing, vol. 22, no. 3, pp. 1042-1055, March 2013.
- A. Kazerouni, U.S. Kamilov, E. Bostan, M. Unser, "Bayesian Denoising: From MAP to MMSE Using Consistent Cycle Spinning," IEEE Signal Processing Letters, vol. 20, no. 3, pp. 249-252, March 2013.
- P. Pulimeno, T. Mannic, D. Sage, L. Giovannoni, P. Salmon, S. Lemeille, M. Giry-Laterrière, M. Unser, D. Bosco, C. Bauer, J. Morf, P. Halban, J. Philippe, C. Dibner, "Autonomous and Self-Sustained Circadian Oscillators Displayed in Human Islet Cells," Diabetologia, vol. 56, no. 3, pp. 497-507, March 2013.
- A. Amini, U.S. Kamilov, E. Bostan, M. Unser, "Bayesian Estimation for Continuous-Time Sparse Stochastic Processes," IEEE Transactions on Signal Processing, vol. 61, no. 4, pp. 907-920, February 15, 2013.
- A. Bourquard, N. Pavillon, E. Bostan, C. Depeursinge, M. Unser, "A Practical Inverse-Problem Approach to Digital Holographic Reconstruction," Optics Express, vol. 21, no. 3, pp. 3417-3433, February 11, 2013.
- A. Bourquard, M. Unser, "Anisotropic Interpolation of Sparse Generalized Image Samples," IEEE Transactions on Image Processing, vol. 22, no. 2, pp. 459-472, February 2013.
- M. Roccio, D. Schmitter, M. Knobloch, Y. Okawa, D. Sage, M.P. Lutolf, "Predicting Stem Cell Fate Changes by Differential Cell Cycle Progression Patterns," Development, vol. 140, no. 2, pp. 459-470, January 15, 2013.
- U.S. Kamilov, P. Pad, A. Amini, M. Unser, "MMSE Estimation of Sparse Lévy Processes," IEEE Transactions on Signal Processing, vol. 61, no. 1, pp. 137-147, January 1, 2013.
- H. Kirshner, F. Aguet, D. Sage, M. Unser, "3-D PSF Fitting for Fluorescence Microscopy: Implementation and Localization Application," Journal of Microscopy, vol. 249, no. 1, pp. 13-25, January 2013.
- J.P. Ward, K.N. Chaudhury, M. Unser, "Decay Properties of Riesz Transforms and Steerable Wavelets," SIAM Journal on Imaging Sciences, vol. 6, no. 2, pp. 984-998, 2013.
- M. Unser, N. Chenouard, "A Unifying Parametric Framework for 2D Steerable Wavelet Transforms," SIAM Journal on Imaging Sciences, vol. 6, no. 1, pp. 102-135, 2013.

Journals • 2012

- U.S. Kamilov, V.K. Goyal, S. Rangan, "Message-Passing De-Quantization with Applications to Compressed Sensing," IEEE Transactions on Signal Processing, vol. 60, no. 12, pp 6270-6281, December 2012.
- D. Wüstner, L.M. Solanko, F.W. Lund, D. Sage, H.J. Schroll, M.A. Lomholt, "Quantitative Fluorescence Loss in Photobleaching for Analysis of Protein Transport and Aggregation," BMC Bioinformatics, vol. 13, no. 296, 21 p., November 13, 2012.
- N. Chenouard, M. Unser, "3D Steerable Wavelets in Practice," IEEE Transactions on Image Processing, vol. 21, no. 11, pp. 4522-4533, November 2012.
- U.S. Kamilov, A. Bourquard, A. Amini, M. Unser, "One-Bit Measurements with Adaptive Thresholds," IEEE Signal Processing Letters, vol. 19, no. 10, pp. 607-610, October 2012.
- C.S. Seelamantula, N. Pavillon, C. Depeursinge, M. Unser, "Local Demodulation of Holograms Using the Riesz Transform with Application to Microscopy," Journal of the Optical Society of America A, vol. 29, no. 10, pp. 2118-2129, October 2012.
- P. Thévenaz, D. Sage, M. Unser, "Bi-Exponential Edge-Preserving Smoother," IEEE Transactions on Image Processing, vol. 21, no. 9, pp. 3924-3936, September 2012.
- A. Entezari, M. Nilchian, M. Unser, "A Box Spline Calculus for the Discretization of Computed Tomography Reconstruction Problems," IEEE Transactions on Medical Imaging, vol. 31, no. 8, pp. 1532-1541, August 2012.
- U. Kamilov, E. Bostan, M. Unser, "Wavelet Shrinkage with Consistent Cycle Spinning Generalizes Total Variation Denoising," IEEE Signal Processing Letters, vol. 19, no. 4, pp. 187-190, April 2012.
- Q. Sun, M. Unser, "Left-Inverses of Fractional Laplacian and Sparse Stochastic Processes," Advances in Computational Mathematics, vol. 36, no. 3, pp. 399-441, April 2012.
- J.P. Ward, H. Kirshner, M. Unser, "Is Uniqueness Lost for Under-Sampled Continuous-Time Auto-Regressive Processes?," IEEE Signal Processing Letters, vol. 19, no. 4, pp. 183-186, April 2012.
- D. Sage, "Analyse d'image scientifique, le monde ImageJ," flash informatique, no. 3, pp. 3-7, March 27, 2012.
- R. Delgado-Gonzalo, P. Thévenaz, C.S. Seelamantula, M. Unser, "Snakes with an Ellipse-Reproducing Property," IEEE Transactions on Image Processing, vol. 21, no. 3, pp. 1258-1271, March 2012.
- M. Guerquin-Kern, L. Lejeune, K.P. Pruessmann, M. Unser, "Realistic Analytical Phantoms for Parallel Magnetic Resonance Imaging," IEEE Transactions on Medical Imaging, vol. 31, no. 3, pp. 626-636, March 2012.
- S. Lefkimmiatis, A. Bourquard, M. Unser, "Hessian-Based Norm Regularization for Image Restoration with Biomedical Applications," IEEE-SPS best paper award, IEEE Transactions on Image Processing, vol. 21, no. 3, pp. 983-995, March 2012.
- R. Delgado-Gonzalo, P. Thévenaz, M. Unser, "Exponential Splines and Minimal-Support Bases for Curve Representation," Computer Aided Geometric Design, vol. 29, no. 2, pp. 109-128, February 2012.
- D. Ruijters, P. Thévenaz, "GPU Prefilter for Accurate Cubic B-Spline Interpolation," The Computer Journal, vol. 55, no. 1, pp. 15-20, January 2012.
- R. Rezakhaniha, A. Agianniotis, J.T.C. Schrauwen, A. Griffa, D. Sage, C.V.C. Bouten, F.N. van de Vosse, M. Unser, N. Stergiopulos, "Experimental Investigation of Collagen Waviness and Orientation in the Arterial Adventitia Using Confocal Laser Scanning Microscopy," Biomechanics and Modeling in Mechanobiology, vol. 11, no. 3-4, pp. 461-473, 2012.

Journals • 2011

- K.N. Chaudhury, D. Sage, M. Unser, "Fast
*O*(1) Bilateral Filtering Using Trigonometric Range Kernels," IEEE Transactions on Image Processing, vol. 20, no. 12, pp. 3376-3382, December 2011. - I. Khalidov, J. Fadili, F. Lazeyras, D. Van De Ville, M. Unser, "Activelets: Wavelets for Sparse Representation of Hemodynamic Responses," Signal Processing, vol. 91, no. 12, pp. 2810-2821, December 2011.
- A. Amini, M. Unser, F. Marvasti, "Compressibility of Deterministic and Random Infinite Sequences," IEEE Transactions on Signal Processing, vol. 59, no. 11, pp. 5193-5201, November 2011.
- J.-C. Olivo-Marin, M. Unser, L. Blanc-Féraud, A. Laine, B. Lelieveldt, "Trends in Bioimaging and Signal Processing," IEEE Signal Processing Magazine, vol. 28, no. 6, pp. 200 (191), November 2011.
- P.D. Tafti, M. Unser, "On Regularized Reconstruction of Vector Fields," IEEE Transactions on Image Processing, vol. 20, no. 11, pp. 3163-3178, November 2011.
- H. Kirshner, S. Maggio, M. Unser, "A Sampling Theory Approach for Continuous ARMA Identification," IEEE Transactions on Signal Processing, vol. 59, no. 10, pp. 4620-4634, October 2011.
- M. Unser, N. Chenouard, D. Van De Ville, "Steerable Pyramids and Tight Wavelet Frames in
*L*_{2}(ℝ^{d})," IEEE Transactions on Image Processing, vol. 20, no. 10, pp. 2705-2721, October 2011. - M. Guerquin-Kern, M. Häberlin, K.P. Pruessmann, M. Unser, "A Fast Wavelet-Based Reconstruction Method for Magnetic Resonance Imaging," IEEE Transactions on Medical Imaging, vol. 30, no. 9, pp. 1649-1660, September 2011.
- D. Van De Ville, M. Kocher, "Nonlocal Means with Dimensionality Reduction and SURE-Based Parameter Selection," IEEE Transactions on Image Processing, vol. 20, no. 9, pp. 2683-2690, September 2011.
- C.S. Seelamantula, N. Pavillon, C. Depeursinge, M. Unser, "Exact Complex-Wave Reconstruction in Digital Holography," Journal of the Optical Society of America A, vol. 28, no. 6, pp. 983-992, June 2011.
- J.-C. Baritaux, K. Hassler, M. Bucher, S. Sanyal, M. Unser, "Sparsity-Driven Reconstruction for FDOT with Anatomical Priors," IEEE Transactions on Medical Imaging, vol. 30, no. 5, pp. 1143-1153, May 2011.
- K.N. Chaudhury, M. Unser, "On the Hilbert Transform of Wavelets," IEEE Transactions on Signal Processing, vol. 59, no. 4, pp. 1890-1894, April 2011.
- F. Luisier, T. Blu, M. Unser, "Image Denoising in Mixed Poisson-Gaussian Noise," IEEE Transactions on Image Processing, vol. 20, no. 3, pp. 696-708, March 2011.
- M. Unser, P.D. Tafti, "Stochastic Models for Sparse and Piecewise-Smooth Signals," IEEE Transactions on Signal Processing, vol. 59, no. 3, pp. 989-1006, March 2011.
- O.V. Morozov, M. Unser, P. Hunziker, "Reconstruction of Large, Irregularly Sampled Multidimensional Images. A Tensor-Based Approach," IEEE Transactions on Medical Imaging, vol. 30, no. 2, pp. 366-374, February 2011.
- P. Thévenaz, R. Delgado-Gonzalo, M. Unser, "The Ovuscule," IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 33, no. 2, pp. 382-393, February 2011.
- D. Wüstner, J.R. Brewer, L. Bagatolli, D. Sage, "Potential of Ultraviolet Wide-Field Imaging and Multiphoton Microscopy for Analysis of Dehydroergosterol in Cellular Membranes," Microscopy Research and Technique, vol. 74, no. 1, pp. 92-108, January 2011.
- D. Jeanbourquin, D. Sage, L. Nguyen, B. Schaeli, S. Kayal, D.A. Barry, L. Rossi, "Flow Measurements in Sewers Based on Image Analysis: Automatic Flow Velocity Algorithm," Water Science & Technology, vol. 64, no. 5, pp. 1108-1114, 2011.

Journals • 2010

- D. Van De Ville, B. Forster-Heinlein, M. Unser, T. Blu, "Analytical Footprints: Compact Representation of Elementary Singularities in Wavelet Bases," IEEE Transactions on Signal Processing, vol. 58, no. 12, pp. 6105-6118, December 2010.
- I. Arganda-Carreras, C.O.S. Sorzano, P. Thévenaz, A. Muñoz Barrutia, J. Kybic, R. Marabini, J.M. Carazo, C. Ortiz de Solórzano, "Non-Rigid Consistent Registration of 2D Image Sequences," Physics in Medicine and Biology, vol. 55, no. 20, pp. 6215-6242, October 2010.
- K.N. Chaudhury, A. Muñoz Barrutia, M. Unser, "Fast Space-Variant Elliptical Filtering Using Box Splines," IEEE Transactions on Image Processing, vol. 19, no. 9, pp. 2290-2306, September 2010.
- A. Griffa, N. Garin, D. Sage, "Comparison of Deconvolution Software: A User Point of View—Part 2," G.I.T. Imaging & Microscopy, vol. 12, no. 3, pp. 41-43, August 2010.
- A.F. Stalder, T. Melchior, M. Müller, D. Sage, T. Blu, M. Unser, "Low-Bond Axisymmetric Drop Shape Analysis for Surface Tension and Contact Angle Measurements of Sessile Drops," Colloids and Surfaces A: Physicochemical and Engineering Aspects, vol. 364, no. 1-3, pp. 72-81, July 20, 2010.
- D. Sage, M. Unser, P. Salmon, C. Dibner, "A Software Solution for Recording Circadian Oscillator Features in Time-Lapse Live Cell Microscopy," Cell Division, vol. 5, no. 17, pp. 1-9, July 6, 2010.
- D. Wüstner, D. Sage, "Multicolor Bleach-Rate Imaging Enlightens
*in vivo*Sterol Transport," Communicative & Integrative Biology, vol. 3, no. 4, pp. 370-373, July/August 2010. - N. Ducros, A. Da Silva, J.-M. Dinten, C.S. Seelamantula, M. Unser, F. Peyrin, "A Time-Domain Wavelet-Based Approach for Fluorescence Diffuse Optical Tomography," Medical Physics, vol. 37, no. 6, pp. 2890-2900, June 2010.
- F. Luisier, T. Blu, M. Unser, "SURE-LET for Orthonormal Wavelet-Domain Video Denoising," IEEE Transactions on Circuits and Systems for Video Technology, vol. 20, no. 6, pp. 913-919, June 2010.
- P. Thévenaz, A.S.G. Singh, E. Bertseva, J. Lekki, A.J. Kulik, M. Unser, "Model-Based Estimation of 3-D Stiffness Parameters in Photonic-Force Microscopy," IEEE Transactions on NanoBioscience, vol. 9, no. 2, pp. 90-99, June 2010.
- J.-C. Baritaux, K. Hassler, M. Unser, "An Efficient Numerical Method for General
*L*_{p}Regularization in Fluorescence Molecular Tomography," IEEE Transactions on Medical Imaging, vol. 29, no. 4, pp. 1075-1087, April 2010. - D. Wüstner, A.L. Larsen, N.J. Færgeman, J.R. Brewer, D. Sage, "Selective Visualization of Fluorescent Sterols in
*Caenorhabditis elegans*by Bleach-Rate-Based Image Segmentation," Traffic, vol. 11, no. 4, pp. 440-454, April 2010. - A. Bourquard, F. Aguet, M. Unser, "Optical Imaging Using Binary Sensors," Optics Express, vol. 18, no. 5, pp. 4876-4888, March 1, 2010.
- İ. Bayram, I.W. Selesnick, "A Subband Adaptive Iterative Shrinkage/Thresholding Algorithm," IEEE Transactions on Signal Processing, vol. 58, no. 3, pp. 1131-1143, March 2010.
- A. Griffa, N. Garin, D. Sage, "Comparison of Deconvolution Software in 3D Microscopy: A User Point of View—Part 1," G.I.T. Imaging & Microscopy, vol. 12, no. 1, pp. 43-45, March 2010.
- C.S. Seelamantula, M. Unser, "Performance Analysis of Reconstruction Techniques for Frequency-Domain Optical-Coherence Tomography," IEEE Transactions on Signal Processing, vol. 58, no. 3, pp. 1947-1951, March 2010.
- M. Unser, D. Van De Ville, "Wavelet Steerability and the Higher-Order Riesz Transform," IEEE Transactions on Image Processing, vol. 19, no. 3, pp. 636-652, March 2010.
- F. Luisier, C. Vonesch, T. Blu, M. Unser, "Fast Interscale Wavelet Denoising of Poisson-Corrupted Images," Signal Processing, vol. 90, no. 2, pp. 415-427, February 2010.
- S. Ramani, P. Thévenaz, M. Unser, "Regularized Interpolation for Noisy Images," IEEE Transactions on Medical Imaging, vol. 29, no. 2, pp. 543-558, February 2010.
- K.N. Chaudhury, M. Unser, "On the Shiftability of Dual-Tree Complex Wavelet Transforms," IEEE Transactions on Signal Processing, vol. 58, no. 1, pp. 221-232, January 2010.
- P.D. Tafti, M. Unser, "Fractional Brownian Vector Fields," Multiscale Modeling & Simulation, vol. 8, no. 5, pp. 1645-1670, 2010.

Journals • 2009

- N. Pavillon, C.S. Seelamantula, J. Kühn, M. Unser, C. Depeursinge, "Suppression of the Zero-Order Term in Off-Axis Digital Holography Through Nonlinear Filtering," Applied Optics, vol. 48, no. 34, pp. H186-H195, December 2009.
- M. Unser, D. Sage, D. Van De Ville, "Multiresolution Monogenic Signal Analysis Using the Riesz-Laplace Wavelet Transform," IEEE Transactions on Image Processing, vol. 18, no. 11, pp. 2402-2418, November 2009.
- D. Van De Ville, M. Kocher, "SURE-Based Non-Local Means," IEEE Signal Processing Letters, vol. 16, no. 11, pp. 973-976, November 2009.
- K.N. Chaudhury, M. Unser, "Construction of Hilbert Transform Pairs of Wavelet Bases and Gabor-Like Transforms," IEEE Transactions on Signal Processing, vol. 57, no. 9, pp. 3411-3425, September 2009.
- T. Binzoni, T.S. Leung, D. Van De Ville, "The Photo-Electric Current in Laser-Doppler Flowmetry by Monte Carlo Simulations," Physics in Medicine and Biology, vol. 54, no. 14, pp. N303-N318, July 21, 2009.
- E. Bertseva, A.S.G. Singh, J. Lekki, P. Thévenaz, M. Lekka, S. Jeney, G. Gremaud, S. Puttini, W. Nowak, G. Dietler, L. Forró, M. Unser, A.J. Kulik, "Intracellular Nanomanipulation by a Photonic-Force Microscope with Real-Time Acquisition of a 3D Stiffness Matrix," Nanotechnology, vol. 20, no. 28, paper no. 285709, July 15, 2009.
- E. Fonck, G.G. Feigl, J. Fasel, D. Sage, M. Unser, D.A. Rüfenacht, N. Stergiopulos, "Effect of Aging on Elastin Functionality in Human Cerebral Arteries," Stroke, vol. 40, no. 7, pp. 2552-2556, July 2009.
- T. Ethofer, D. Van De Ville, K. Scherer, P. Vuilleumier, "Decoding of Emotional Information in Voice-Sensitive Cortices," Current Biology, vol. 19, no. 12, pp. 1028-1033, June 23, 2009.
- O. Bernard, D. Friboulet, P. Thévenaz, M. Unser, "Variational B-Spline Level-Set: A Linear Filtering Approach for Fast Deformable Model Evolution," IEEE Transactions on Image Processing, vol. 18, no. 6, pp. 1179-1191, June 2009.
- F. Aguet, S. Geissbühler, I. Märki, T. Lasser, M. Unser, "Super-Resolution Orientation Estimation and Localization of Fluorescent Dipoles Using 3-D Steerable Filters," Optics Express, vol. 17, no. 8, pp. 6829-6848, April 9, 2009.
- J.M. Mari, T. Blu, O.B. Matar, M. Unser, C. Cachard, "A Bulk Modulus Dependent Linear Model for Acoustical Imaging," The Journal of the Acoustical Society of America, vol. 125, no. 4, pp. 2413-2419, April 2009.
- P.D. Tafti, D. Van De Ville, M. Unser, "Invariances, Laplacian-Like Wavelet Bases, and the Whitening of Fractal Processes," IEEE Transactions on Image Processing, vol. 18, no. 4, pp. 689-702, April 2009.
- S.A. da Silveira, B.L. Schneider, C. Cifuentes-Diaz, D. Sage, T. Abbas-Terki, T. Iwatsubo, M. Unser, P. Aebischer, "Phosphorylation Does Not Prompt, Nor Prevent, the Formation of α-Synuclein Toxic Species in a Rat Model of Parkinson's Disease," Human Molecular Genetics, vol. 18, no. 5, pp. 872-887, March 1, 2009.
- C. Vonesch, M. Unser, "A Fast Multilevel Algorithm for Wavelet-Regularized Image Restoration," IEEE Transactions on Image Processing, vol. 18, no. 3, pp. 509-523, March 2009.
- A. Raabe, D. Van De Ville, M. Leutenegger, A. Szelényi, E. Hattingen, R. Gerlach, V. Seifert, C. Hauger, A. Lopez, R. Leitgeb, M. Unser, E.J. Martin-Williams, T. Lasser, "Laser Doppler Imaging for Intraoperative Human Brain Mapping," NeuroImage, vol. 44, no. 4, pp. 1284-1289, February 15, 2009.
- C. Dibner, D. Sage, M. Unser, C. Bauer, T. d'Eysmond, F. Naef, Ü. Schibler, "Circadian Gene Expression Is Resilient to Large Fluctuations in Overall Transcription Rates," The European Molecular Biology Organization Journal, vol. 28, no. 2, pp. 123-134, January 21, 2009.
- D. Kandaswamy, T. Blu, D. Van De Ville, "Analytic Sensing: Noniterative Retrieval of Point Sources from Boundary Measurements," SIAM Journal on Scientific Computing, vol. 31, no. 4, pp. 3179-3194, 2009.
- L.S. Nguyen, B. Schaeli, D. Sage, S. Kayal, D. Jeanbourquin, D.A. Barry, L. Rossi, "Vision-Based System for the Control and Measurement of Wastewater Flow Rate in Sewer Systems," Water Science & Technology, vol. 60, no. 9, pp. 2281-2289, 2009.

Journals • 2008

- T. Binzoni, D. Van De Ville, "Full-Field Laser-Doppler Imaging and Its Physiological Significance for Tissue Blood Perfusion," Physics in Medicine and Biology, vol. 53, no. 23, pp. 6673-6694, December 7, 2008.
- D. Van De Ville, M. Unser, "False Discovery Rate for Wavelet-Based Statistical Parametric Mapping," IEEE Journal of Selected Topics in Signal Processing, vol. 2, no. 6, pp. 897-906, December 2008.
- M. Unser, D. Van De Ville, "The Pairing of a Wavelet Basis with a Mildly Redundant Analysis via Subband Regression," IEEE Transactions on Image Processing, vol. 17, no. 11, pp. 2040-2052, November 2008.
- D. Van De Ville, M. Unser, "Complex Wavelet Bases, Steerability, and the Marr-Like Pyramid," IEEE Transactions on Image Processing, vol. 17, no. 11, pp. 2063-2080, November 2008.
- A. Beuchat, P. Thévenaz, M. Unser, T. Ebner, A. Senn, F. Urner, M. Germond, C.O.S. Sorzano, "Quantitative Morphometrical Characterization of Human Pronuclear Zygotes," Human Reproduction, vol. 23, no. 9, pp. 1983-1992, September 2008.
- B. Forster, T. Blu, D. Van De Ville, M. Unser, "Shift-Invariant Spaces from Rotation-Covariant Functions," Applied and Computational Harmonic Analysis, vol. 25, no. 2, pp. 240-265, September 2008.
- S. Ramani, T. Blu, M. Unser, "Monte-Carlo SURE: A Black-Box Optimization of Regularization Parameters for General Denoising Algorithms," IEEE Transactions on Image Processing, vol. 17, no. 9, pp. 1540-1554, September 2008.
- F. Aguet, D. Van De Ville, M. Unser, "Model-Based 2.5-D Deconvolution for Extended Depth of Field in Brightfield Microscopy," IEEE Transactions on Image Processing, vol. 17, no. 7, pp. 1144-1153, July 2008.
- C.S. Seelamantula, M.L. Villiger, R.A. Leitgeb, M. Unser, "Exact and Efficient Signal Reconstruction in Frequency-Domain Optical-Coherence Tomography," Journal of the Optical Society of America A, vol. 25, no. 7, pp. 1762-1771, July 2008.
- J. Verhaeghe, D. Van De Ville, I. Khalidov, Y. D'Asseler, I. Lemahieu, M. Unser, "Dynamic PET Reconstruction Using Wavelet Regularization with Adapted Basis Functions," IEEE Transactions on Medical Imaging, vol. 27, no. 7, pp. 943-959, July 2008.
- M. Tsukahara, S. Mitrović, V. Gajdosik, G. Margaritondo, L. Pournin, M. Ramaioli, D. Sage, Y. Hwu, M. Unser, T.M. Liebling, "Coupled Tomography and Distinct-Element-Method Approach to Exploring the Granular Media Microstructure in a Jamming Hourglass," Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), vol. 77, no. 6, paper no. 061306, 11 p., June 2008.
- L. Condat, D. Van De Ville, B. Forster-Heinlein, "Reversible, Fast, and High-Quality Grid Conversions," IEEE Transactions on Image Processing, vol. 17, no. 5, pp. 679-693, May 2008.
- P. Thévenaz, M. Bierlaire, M. Unser, "Halton Sampling for Image Registration Based on Mutual Information," Sampling Theory in Signal and Image Processing, vol. 7, no. 2, pp. 141-171, May 2008.
- F. Luisier, T. Blu, "SURE-LET Multichannel Image Denoising: Interscale Orthonormal Wavelet Thresholding," IEEE Transactions on Image Processing, vol. 17, no. 4, pp. 482-492, April 2008.
- P. Thévenaz, M. Unser, "Snakuscules," IEEE Transactions on Image Processing, vol. 17, no. 4, pp. 585-593, April 2008.
- C. Vonesch, M. Unser, "A Fast Thresholded Landweber Algorithm for Wavelet-Regularized Multidimensional Deconvolution," IEEE Transactions on Image Processing, vol. 17, no. 4, pp. 539-549, April 2008.
- T. Blu, P.L. Dragotti, M. Vetterli, P. Marziliano, L. Coulot, "Sparse Sampling of Signal Innovations," IEEE Signal Processing Magazine, vol. 25, no. 2, pp. 31-40, March 2008.
- A. Entezari, D. Van De Ville, T. Möller, "Practical Box Splines for Reconstruction on the Body Centered Cubic Lattice," IEEE Transactions on Visualization and Computer Graphics, vol. 14, no. 2, pp. 313-328, March/April 2008.
- S. Ramani, D. Van De Ville, T. Blu, M. Unser, "Nonideal Sampling and Regularization Theory," IEEE Transactions on Signal Processing, vol. 56, no. 3, pp. 1055-1070, March 2008.
- G. Azarias, D. Van De Ville, M. Unser, J.-Y. Chatton, "Spontaneous Na
^{+}Transients in Individual Mitochondria of Intact Astrocytes," Glia, vol. 56, no. 3, pp. 342-353, February 2008. - H. Schober, V. Kalck, M.A. Vega-Palas, G. Van Houwe, D. Sage, M. Unser, M.R. Gartenberg, S.M. Gasser, "Controlled Exchange of Chromosomal Arms Reveals Principles Driving Telomere Interactions in Yeast," Genome Research, vol. 18, no. 2, pp. 261-271, February 2008.
- C.O.S. Sorzano, I. Arganda-Carreras, P. Thévenaz, A. Beloso, G. Morales, I. Valdés, C. Pérez-García, C. Castillo, E. Garrido, M. Unser, "Elastic Image Registration of 2-D Gels for Differential and Repeatability Studies," Proteomics, vol. 8, no. 1, pp. 62-65, January 2008.
- C.S. Seelamantula, M. Unser, "A Generalized Sampling Method for Finite-Rate-of-Innovation-Signal Reconstruction," IEEE Signal Processing Letters, vol. 15, pp. 813-816, 2008.
- Y. Barbotin, D. Van De Ville, T. Blu, M. Unser, "Fast Computation of Polyharmonic B-Spline Autocorrelation Filters," IEEE Signal Processing Letters, vol. 15, pp. 773-776, 2008.

Journals • 2007

- R.A. Leitgeb, R. Michaely, T. Lasser, S.C. Sekhar, "Complex Ambiguity-Free Fourier Domain Optical Coherence Tomography through Transverse Scanning," Optics Letters, vol. 32, no. 23, pp. 3453-3455, December 2007.
- T. Blu, F. Luisier, "The SURE-LET Approach to Image Denoising," IEEE Transactions on Image Processing, vol. 16, no. 11, pp. 2778-2786, November 2007.
- D. Van De Ville, M.L. Seghier, F. Lazeyras, T. Blu, M. Unser, "WSPM: Wavelet-Based Statistical Parametric Mapping," NeuroImage, vol. 37, no. 4, pp. 1205-1217, October 1, 2007.
- C. Vonesch, T. Blu, M. Unser, "Generalized Daubechies Wavelet Families," IEEE Transactions on Signal Processing, vol. 55, no. 9, pp. 4415-4429, September 2007.
- 平林 晃 (A. Hirabayashi), M. Unser, "Consistent Sampling and Signal Recovery," IEEE Transactions on Signal Processing, vol. 55, no. 8, pp. 4104-4115, August 2007.
- I. Khalidov, D. Van De Ville, M. Jacob, F. Lazeyras, M. Unser, "BSLIM: Spectral Localization by Imaging with Explicit
*B*_{0}Field Inhomogeneity Compensation," IEEE Transactions on Medical Imaging, vol. 26, no. 7, pp. 990-1000, July 2007. - K.N. Chaudhury, K.R. Ramakrishnan, "Stability and Convergence of the Level Set Method in Computer Vision," Pattern Recognition Letters, vol. 28, no. 7, pp. 884-893, May 2007.
- L. Condat, D. Van De Ville, "Quasi-Interpolating Spline Models for Hexagonally-Sampled Data," IEEE Transactions on Image Processing, vol. 16, no. 5, pp. 1195-1206, May 2007.
- P.L. Dragotti, M. Vetterli, T. Blu, "Sampling Moments and Reconstructing Signals of Finite Rate of Innovation: Shannon Meets Strang-Fix," IEEE Transactions on Signal Processing, vol. 55, no. 5, part 1, pp. 1741-1757, May 2007.
- T. Blu, M. Unser, "Self-Similarity: Part II—Optimal Estimation of Fractal Processes," IEEE Transactions on Signal Processing, vol. 55, no. 4, pp. 1364-1378, April 2007.
- M. Unser, T. Blu, "Self-Similarity: Part I—Splines and Operators," IEEE Transactions on Signal Processing, vol. 55, no. 4, pp. 1352-1363, April 2007.
- F. Luisier, T. Blu, M. Unser, "A New SURE Approach to Image Denoising: Interscale Orthonormal Wavelet Thresholding," IEEE-SPS young author best paper award, IEEE Transactions on Image Processing, vol. 16, no. 3, pp. 593-606, March 2007.
- B. Bathellier, D. Van De Ville, T. Blu, M. Unser, A. Carleton, "Wavelet-Based Multi-Resolution Statistics for Optical Imaging Signals: Application to Automated Detection of Odour Activated Glomeruli in the Mouse Olfactory Bulb," NeuroImage, vol. 34, no. 3, pp. 1020-1035, February 1, 2007.
- P. Thévenaz, M. Unser, "User-Friendly Semiautomated Assembly of Accurate Image Mosaics in Microscopy," Microscopy Research and Technique, vol. 70, no. 2, pp. 135-146, February 2007.
- M. Arigovindan, M. Sühling, C. Jansen, P. Hunziker, M. Unser, "Full Motion and Flow Field Recovery from Echo Doppler Data," IEEE Transactions on Medical Imaging, vol. 26, no. 1, pp. 31-45, January 2007.

Journals • 2006

- P.D. Tafti, S. Shirani, X. Wu, "On Interpolation and Resampling of Discrete Data," IEEE Signal Processing Letters, vol. 13, no. 12, pp. 733-736, December 2006.
- A. Amzallag, C. Vaillant, M. Jacob, M. Unser, J. Bednar, J.D. Kahn, J. Dubochet, A. Stasiak, J.H. Maddocks, "3D Reconstruction and Comparison of Shapes of DNA Minicircles Observed by Cryo-Electron Microscopy," Nucleic Acids Research, vol. 34, no. 18, pp. e125, September 29, 2006.
- A.F. Stalder, G. Kulik, D. Sage, L. Barbieri, P. Hoffmann, "A Snake-Based Approach to Accurate Determination of Both Contact Points and Contact Angles," Colloids And Surfaces A: Physicochemical And Engineering Aspects, vol. 286, no. 1-3, pp. 92-103, September 2006.
- S. Tirosh, D. Van De Ville, M. Unser, "Polyharmonic Smoothing Splines and the Multidimensional Wiener Filtering of Fractal-Like Signals," IEEE Transactions on Image Processing, vol. 15, no. 9, pp. 2616-2630, September 2006.
- S.V. Aschkenasy, C. Jansen, R. Osterwalder, A. Linka, M. Unser, S. Marsch, P. Hunziker, "Unsupervised Image Classification of Medical Ultrasound Data by Multiresolution Elastic Registration," Ultrasound in Medicine and Biology, vol. 32, no. 7, pp. 1047-1054, July 2006.
- L. Condat, D. Van De Ville, "Three-Directional Box-Splines: Characterization and Efficient Evaluation," IEEE Signal Processing Letters, vol. 13, no. 7, pp. 417-420, July 2006.
- Y.C. Eldar, M. Unser, "Nonideal Sampling and Interpolation from Noisy Observations in Shift-Invariant Spaces," IEEE Transactions on Signal Processing, vol. 54, no. 7, pp. 2636-2651, July 2006.
- R.S. Patel, D. Van De Ville, F. DuBois Bowman, "Determining Significant Connectivity by 4D Spatiotemporal Wavelet Packet Resampling of Functional Neuroimaging Data," NeuroImage, vol. 31, no. 3, pp. 1142-1155, July 2006.
- S. Ramani, M. Unser, "Matérn B-Splines and the Optimal Reconstruction of Signals," IEEE Signal Processing Letters, vol. 13, no. 7, pp. 437-440, July 2006.
- P. Marziliano, M. Vetterli, T. Blu, "Sampling and Exact Reconstruction of Bandlimited Signals with Additive Shot Noise," IEEE Transactions on Information Theory, vol. 52, no. 5, pp. 2230-2233, May 2006.
- C. Vonesch, F. Aguet, J.-L. Vonesch, M. Unser, "The Colored Revolution of Bioimaging," IEEE Signal Processing Magazine, vol. 23, no. 3, pp. 20-31, May 2006.
- B. Forster, "Approximated Leont′ev Coefficients," Journal of Computational Analysis and Applications, vol. 7, no. 2, pp. 123-134, April 2006.
- I. Khalidov, M. Unser, "From Differential Equations to the Construction of New Wavelet-Like Bases," IEEE Transactions on Signal Processing, vol. 54, no. 4, pp. 1256-1267, April 2006.
- B. Forster, T. Blu, M. Unser, "Complex B-Splines," Applied and Computational Harmonic Analysis, vol. 20, no. 2, pp. 261-282, March 2006.
- D. Van De Ville, T. Blu, M. Unser, "Surfing the Brain—An Overview of Wavelet-Based Techniques for fMRI Data Analysis," IEEE Engineering in Medicine and Biology Magazine, vol. 25, no. 2, pp. 65-78, March-April 2006.
- M. Jacob, T. Blu, C. Vaillant, J.H. Maddocks, M. Unser, "3-D Shape Estimation of DNA Molecules from Stereo Cryo-Electron Micro-Graphs Using a Projection-Steerable Snake," IEEE Transactions on Image Processing, vol. 15, no. 1, pp. 214-227, January 2006.
- S. Jonić, P. Thévenaz, G. Zheng, L.-P. Nolte, M. Unser, "An Optimized Spline-Based Registration of a 3D CT to a Set of C-Arm Images," International Journal of Biomedical Imaging, vol. 2006, ID 47197, 2006.

Journals • 2005

- F. Aguet, D. Van De Ville, M. Unser, "A Maximum-Likelihood Formalism for Sub-Resolution Axial Localization of Fluorescent Nanoparticles," Optics Express, vol. 13, no. 26, pp. 10503-10522, December 22, 2005.
- D. Van De Ville, T. Blu, M. Unser, "Isotropic Polyharmonic B-Splines: Scaling Functions and Wavelets," IEEE Transactions on Image Processing, vol. 14, no. 11, pp. 1798-1813, November 2005.
- J.N. Feige, D. Sage, W. Wahli, B. Desvergne, L. Gelman, "PixFRET, an ImageJ Plug-in for FRET Calculation That Can Accommodate Variations in Spectral Bleed-throughs," Microscopy Research and Technique, vol. 68, no. 1, pp. 51-58, September 2005.
- M.J. Ledesma-Carbayo, J. Kybic, M. Desco, A. Santos, M. Sühling, P. Hunziker, M. Unser, "Spatio-Temporal Nonrigid Registration for Ultrasound Cardiac Motion Estimation," IEEE Transactions on Medical Imaging, vol. 24, no. 9, pp. 1113-1126, September 2005.
- D. Sage, F.R. Neumann, F. Hediger, S.M. Gasser, M. Unser, "Automatic Tracking of Individual Fluorescence Particles: Application to the Study of Chromosome Dynamics," IEEE Transactions on Image Processing, vol. 14, no. 9, pp. 1372-1383, September 2005.
- Y.L. de Meneses, P. Roduit, F. Luisier, J. Jacot, "Trajectory Analysis for Sport and Video Surveillance," Electronic Letters on Computer Vision and Image Analysis, vol. 5, no. 3, pp. 148-156, August 2005.
- S. Jonić, C.O.S. Sorzano, P. Thévenaz, C. El-Bez, S. De Carlo, M. Unser, "Spline-Based Image-to-Volume Registration for Three-Dimensional Electron Microscopy," Ultramicroscopy, vol. 103, no. 4, pp. 303-317, July 2005.
- F. Precioso, M. Barlaud, T. Blu, M. Unser, "Robust Real-Time Segmentation of Images and Videos Using a Smooth-Spline Snake-Based Algorithm," IEEE Transactions on Image Processing, vol. 14, no. 7, pp. 910-924, July 2005.
- M. Unser, T. Blu, "Generalized Smoothing Splines and the Optimal Discretization of the Wiener Filter," IEEE Transactions on Signal Processing, vol. 53, no. 6, pp. 2146-2159, June 2005.
- M. Arigovindan, M. Sühling, P. Hunziker, M. Unser, "Variational Image Reconstruction from Arbitrarily Spaced Samples: A Fast Multiresolution Spline Solution," IEEE Transactions on Image Processing, vol. 14, no. 4, pp. 450-460, April 2005.
- M. Feilner, D. Van De Ville, M. Unser, "An Orthogonal Family of Quincunx Wavelets with Continuously Adjustable Order," IEEE Transactions on Image Processing, vol. 14, no. 4, pp. 499-510, April 2005.
- C.Ó.S. Sorzano, P. Thévenaz, M. Unser, "Elastic Registration of Biological Images Using Vector-Spline Regularization ," IEEE Transactions on Biomedical Engineering, vol. 52, no. 4, pp. 652-663, April 2005.
- M. Sühling, M. Arigovindan, C. Jansen, P. Hunziker, M. Unser, "Myocardial Motion Analysis from B-Mode Echocardiograms," IEEE Transactions on Image Processing, vol. 14, no. 4, pp. 525-536, April 2005.
- M. Unser, "Cardinal Exponential Splines: Part II—Think Analog, Act Digital," IEEE Transactions on Signal Processing, vol. 53, no. 4, pp. 1439-1449, April 2005.
- M. Unser, T. Blu, "Cardinal Exponential Splines: Part I—Theory and Filtering Algorithms," IEEE Transactions on Signal Processing, vol. 53, no. 4, pp. 1425-1438, April 2005.
- M. Unser, C.O.S. Sorzano, P. Thévenaz, S. Jonić, C. El-Bez, S. De Carlo, J.F. Conway, B.L. Trus, "Spectral Signal-to-Noise Ratio and Resolution Assessment of 3D Reconstructions," Journal of Structural Biology, vol. 149, no. 3, pp. 243-255, March 2005.
- A. Patil, P. Rastogi, R.V.V.L. Langoju, "High-Resolution Frequency Estimation Technique for Recovering Phase Distribution in Interferometers," Optics Letters, vol. 30, no. 4, pp. 391-393, February 2005.
- D. Van De Ville, T. Blu, M. Unser, "On the Multidimensional Extension of the Quincunx Subsampling Matrix," IEEE Signal Processing Letters, vol. 12, no. 2, pp. 112-115, February 2005.
- B. Forster, "Direct Approximation Theorems for Dirichlet Series in the Norm of Uniform Convergence," Journal of Approximation Theory, vol. 132, no. 1, pp. 1-14, January 2005.

Journals • 2004

- M. Liebling, M. Unser, "Autofocus for Digital Fresnel Holograms by Use of a Fresnelet-Sparsity Criterion," Journal of the Optical Society of America A, vol. 21, no. 12, pp. 2424-2430, December 2004.
- D. Van De Ville, T. Blu, M. Unser, "Integrated Wavelet Processing and Spatial Statistical Testing of fMRI Data," NeuroImage, vol. 23, no. 4, pp. 1472-1485, December 2004.
- M. Sühling, C. Jansen, M. Arigovindan, P. Buser, S. Marsch, M. Unser, P. Hunziker, "Multiscale Motion Mapping—A Novel Computer Vision Technique for Quantitative, Objective Echocardiographic Motion Measurement Independent of Doppler: First Clinical Description and Validation," Circulation, vol. 110, no. 19, pp. 3093-3099, November 9, 2004.
- A. Patil, R.V.V.L. Langoju, P. Rastogi, "An Integral Approach to Phase Shifting Interferometry Using a Super-Resolution Frequency Estimation Method," Optics Express, vol. 12, no. 20, pp. 4681-4697, October 4, 2004.
- B. Forster, D. Van De Ville, J. Berent, D. Sage, M. Unser, "Complex Wavelets for Extended Depth-of-Field: A New Method for the Fusion of Multichannel Microscopy Images," Microscopy Research and Technique, vol. 65, no. 1-2, pp. 33-42, September 2004.
- M. Jacob, T. Blu, M. Unser, "Efficient Energies and Algorithms for Parametric Snakes," IEEE Transactions on Image Processing, vol. 13, no. 9, pp. 1231-1244, September 2004.
- M. Jacob, M. Unser, "Design of Steerable Filters for Feature Detection Using Canny-Like Criteria," IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 26, no. 8, pp. 1007-1019, August 2004.
- C. Dornier, L. Dorsaz-Brossa, P. Thévenaz, F. Casagni, P. Brochut, A. Mombelli, J.-P. Vallée, "Geometric Alignment and Chromatic Calibration of Serial Radiographic Images," Dentomaxillofacial Radiology, vol. 33, no. 4, pp. 220-225, July 2004.
- H. Thayyullathil, R.V.V.L. Langoju, P. Renganathan, R.M. Vasu, R. Kanjirodan, L.M. Patnaik, "Three-Dimensional Optical Tomographic Imaging of Supersonic Jets through Inversion of Phase Data Obtained through the Transport-of-Intensity Equation," Applied Optics, vol. 43, no. 21, pp. 4133-4141, July 20, 2004.
- C.O.S. Sorzano, S. Jonić, C. El-Bez, J.M. Carazo, S. De Carlo, P. Thévenaz, M. Unser, "A Multiresolution Approach to Orientation Assignment in 3D Electron Microscopy of Single Particles," Journal of Structural Biology, vol. 146, no. 3, pp. 381-392, June 2004.
- D. Van De Ville, T. Blu, M. Unser, W. Philips, I. Lemahieu, R. Van de Walle, "Hex-Splines: A Novel Spline Family for Hexagonal Lattices," IEEE Transactions on Image Processing, vol. 13, no. 6, pp. 758-772, June 2004.
- T. Blu, P. Thévenaz, M. Unser, "Linear Interpolation Revitalized," IEEE Transactions on Image Processing, vol. 13, no. 5, pp. 710-719, May 2004.
- D. Van De Ville, W. Philips, R. Van de Walle, I. Lemahieu, "Image Scrambling without Bandwidth Expansion," IEEE Transactions on Circuits and Systems for Video Technology, vol. 14, no. 6, pp. 892-897, June 2004.
- B. Forster, "On the Relation Between Fourier and Leont′ev Coefficients with Respect to Smirnov Spaces," Ukrainian Mathematical Journal, vol. 56, no. 4, pp. 628-640, April 2004.
- E. Meijering, M. Jacob, J.-C.F. Sarria, P. Steiner, H. Hirling, M. Unser, "Design and Validation of a Tool for Neurite Tracing and Analysis in Fluorescence Microscopy Images," Cytometry Part A, vol. 58A, no. 2, pp. 167-176, April 2004.
- M. Sühling, M. Arigovindan, P. Hunziker, M. Unser, "Multiresolution Moment Filters: Theory and Applications," IEEE Transactions on Image Processing, vol. 13, no. 4, pp. 484-495, April 2004.
- M. Liebling, T. Blu, M. Unser, "Complex-Wave Retrieval from a Single Off-Axis Hologram," Journal of the Optical Society of America A, vol. 21, no. 3, pp. 367-377, March 2004.

Journals • 2003

- T. Blu, P. Thévenaz, M. Unser, "Complete Parameterization of Piecewise-Polynomial Interpolation Kernels," IEEE Transactions on Image Processing, vol. 12, no. 11, pp. 1297-1309, November 2003.
- J. Kybic, M. Unser, "Fast Parametric Elastic Image Registration," IEEE Transactions on Image Processing, vol. 12, no. 11, pp. 1427-1442, November 2003.
- D. Sage, M. Unser, "Teaching Image-Processing Programming in Java," IEEE Signal Processing Magazine, vol. 20, no. 6, pp. 43-52, November 2003.
- B. Forster, "Inverse Approximation Theorems for Dirichlet Series in
*AC*(*D*‾)," East Journal on Approximations, vol. 9, no. 3, pp. 305-322, September 2003. - M. Unser, T. Blu, "Mathematical Properties of the JPEG2000 Wavelet Filters," IEEE Transactions on Image Processing, vol. 12, no. 9, pp. 1080-1090, September 2003.
- C. Dornier, M.K. Ivancevic, P. Thévenaz, J.-P. Vallée, "Improvement in the Quantification of Myocardial Perfusion Using an Automatic Spline-Based Registration Algorithm," Journal of Magnetic Resonance Imaging, vol. 18, no. 2, pp. 160-168, August 2003.
- D. Van De Ville, M. Nachtegael, D. Van der Weken, E.E. Kerre, W. Philips, I. Lemahieu, "Noise Reduction by Fuzzy Image Filtering," IEEE Transactions on Fuzzy Systems, vol. 11, no. 4, pp. 429-436, August 2003.
- P. Thévenaz, M. Unser, "Precision Isosurface Rendering of 3-D Image Data," IEEE Transactions on Image Processing, vol. 12, no. 7, pp. 764-775, July 2003.
- D. Van De Ville, W. Philips, I. Lemahieu, R. Van de Walle, "Suppression of Sampling Moire in Color Printing by Spline-Based Least-Squares Prefiltering," Pattern Recognition Letters, vol. 24, no. 11, pp. 1787-1794, July 2003.
- E. Meijering, M. Unser, "A Note on Cubic Convolution Interpolation," IEEE Transactions on Image Processing, vol. 12, no. 4, pp. 477-479, April 2003.
- M. Unser, A. Aldroubi, A. Laine, "Guest Editorial: Wavelets in Medical Imaging," IEEE Transactions on Medical Imaging, vol. 22, no. 3, pp. 285-288, March 2003.
- M. Unser, T. Blu, "Wavelet Theory Demystified," IEEE Transactions on Signal Processing, vol. 51, no. 2, pp. 470-483, February 2003.
- 市毛弘一 (K. Ichige), T. Blu, M. Unser, "スプライン関数とそのディジタル信号処理・画像処理への 応用に関する研究," The Telecommunications Advancement Foundation, vol. 18, no. 7(1), pp. 358-365, January 2003.
- M. Liebling, T. Blu, M. Unser, "Fresnelets: New Multiresolution Wavelet Bases for Digital Holography," IEEE Transactions on Image Processing, vol. 12, no. 1, pp. 29-43, January 2003.

Journals • 2002

- L. Zeng, C.P. Jansen, S. Marsch, M. Unser, P.R. Hunziker, "Four-Dimensional Wavelet Compression of Arbitrarily Sized Echocardiographic Data," IEEE Transactions on Medical Imaging, vol. 21, no. 9, pp. 1179-1187, September 2002.
- J. Kybic, T. Blu, M. Unser, "Generalized Sampling: A Variational Approach—Part II: Applications," IEEE Transactions on Signal Processing, vol. 50, no. 8, pp. 1977-1985, August 2002.
- J. Kybic, T. Blu, M. Unser, "Generalized Sampling: A Variational Approach—Part I: Theory," IEEE Transactions on Signal Processing, vol. 50, no. 8, pp. 1965-1976, August 2002.
- M. Unser, Z.-P. Liang, "Guest Editorial: First IEEE Symposium on Biomedical Imaging," IEEE Transactions on Medical Imaging, vol. 21, no. 8, pp. 850-851, August 2002.
- A. Muñoz Barrutia, T. Blu, M. Unser, "
*l*-Multiresolution Analysis: How to Reduce Ringing and Sparsify the Error," IEEE Transactions on Image Processing, vol. 11, no. 6, pp. 656-669, June 2002._{p} - M. Vetterli, P. Marziliano, T. Blu, "Sampling Signals with Finite Rate of Innovation," IEEE-SPS best paper award, IEEE Transactions on Signal Processing, vol. 50, no. 6, pp. 1417-1428, June 2002.
- M. Jacob, T. Blu, M. Unser, "Sampling of Periodic Signals: A Quantitative Error Analysis," IEEE Transactions on Signal Processing, vol. 50, no. 5, pp. 1153-1159, May 2002.
- A. Muñoz Barrutia, R. Ertlé, M. Unser, "Continuous Wavelet Transform with Arbitrary Scales and
*O*(*N*) Complexity," Signal Processing, vol 82, no. 5, pp. 749-757, May 2002. - S. Horbelt, M. Liebling, M. Unser, "Discretization of the Radon Transform and of Its Inverse by Spline Convolutions," IEEE Transactions on Medical Imaging, vol. 21, no. 4, pp. 363-376, April 2002.
- T. Blu, M. Unser, "Wavelets, Fractals, and Radial Basis Functions," IEEE-SPS best paper award, IEEE Transactions on Signal Processing, vol. 50, no. 3, pp. 543-553, March 2002.
- E. Meijering, "A Chronology of Interpolation: From Ancient Astronomy to Modern Signal and Image Processing," Proceedings of the IEEE, vol. 90, no. 3, pp. 319-342, March 2002.

Journals • 2001

- A. Muñoz Barrutia, T. Blu, M. Unser, "Least-Squares Image Resizing Using Finite Differences," IEEE Transactions on Image Processing, vol. 10, no. 9, pp. 1365-1378, September 2001.
- T. Blu, P. Thévenaz, M. Unser, "MOMS: Maximal-Order Interpolation of Minimal Support," IEEE Transactions on Image Processing, vol. 10, no. 7, pp. 1069-1080, July 2001.
- M. Jacob, T. Blu, M. Unser, "An Exact Method for Computing the Area Moments of Wavelet and Spline Curves," IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 23, no. 6, pp. 633-642, June 2001.

Journals • 2000

- P. Thévenaz, M. Unser, "Optimization of Mutual Information for Multiresolution Image Registration," IEEE Transactions on Image Processing, vol. 9, no. 12, pp. 2083-2099, December 2000.
- P. Brigger, J. Hoeg, M. Unser, "B-Spline Snakes: A Flexible Tool for Parametric Contour Detection," IEEE Transactions on Image Processing, vol. 9, no. 9, pp. 1484-1496, September 2000.
- P. Thévenaz, T. Blu, M. Unser, "Interpolation Revisited," IEEE Transactions on Medical Imaging, vol. 19, no. 7, pp. 739-758, July 2000.
- C. Lee, S. Huh, T.A. Ketter, M. Unser, "Automated Segmentation of the Corpus Callosum in Midsagittal Brain Magnetic Resonance Images," Optical Engineering, vol. 39, no. 4, pp. 924-935, April 2000.
- R. O’Donnell, "Prolog to Sampling—50 Years After Shannon," Proceedings of the IEEE, vol. 88, no. 4, pp. 567-568, April 2000.
- M. Unser, "Sampling—50 Years After Shannon," Proceedings of the IEEE, vol. 88, no. 4, pp. 569-587, April 2000.
- M. Unser, T. Blu, "Fractional Splines and Wavelets," SIAM Review, vol. 42, no. 1, pp. 43-67, March 2000.
- J. Kybic, P. Thévenaz, A. Nirkko, M. Unser, "Unwarping of Unidirectionally Distorted EPI Images," IEEE Transactions on Medical Imaging, vol. 19, no. 2, pp. 80-93, February 2000.

Journals • 1999

- M. Unser, "Splines: A Perfect Fit for Signal and Image Processing," IEEE-SPS best paper award, IEEE Signal Processing Magazine, vol. 16, no. 6, pp. 22-38, November 1999.
- T. Blu, M. Unser, "Quantitative Fourier Analysis of Approximation Techniques: Part II—Wavelets," IEEE Transactions on Signal Processing, vol. 47, no. 10, pp. 2796-2806, October 1999.
- T. Blu, M. Unser, "Quantitative Fourier Analysis of Approximation Techniques: Part I—Interpolators and Projectors," IEEE Transactions on Signal Processing, vol. 47, no. 10, pp. 2783-2795, October 1999.
- P. Brigger, F. Müller, K. Illgner, M. Unser, "Centered Pyramids," IEEE Transactions on Image Processing, vol. 8, no. 9, pp. 1254-1264, September 1999.
- P. Brigger, S.L. Bacharach, G. Srinivasan, K.A. Nour, J.A. Carson, V. Dilsizian, A. Aldroubi, M. Unser, "Segmentation of Gated Tl-SPECT Images and Computation of Ejection Fraction: A Different Approach," Journal of Nuclear Cardiology, vol. 6, no. 3, pp. 286-297, May-June 1999.
- M.J. Vrhel, M. Unser, "Multichannel Restoration with Limited
*a priori*Information," IEEE Transactions on Image Processing, vol. 8, no. 4, pp. 527-536, April 1999. - T. Blu, M. Unser, "Approximation Error for Quasi-Interpolators and (Multi-) Wavelet Expansions," Applied and Computational Harmonic Analysis, vol. 6, no. 2, pp. 219-251, March 1999.
- D. Popović, R.B. Stein, M.N. Oğuztöreli, M. Lebiedowska, S. Jonić, "Optimal Control of Walking with Functional Electrical Stimulation: A Computer Simulation Study," IEEE Transactions on Rehabilitation Engineering, vol. 7, no. 1, pp. 69-79, March 1999.
- S. Jonić, T. Janković, V. Gajić, D. Popović, "Three Machine Learning Techniques for Automatic Determination of Rules to Control Locomotion," IEEE Transactions on Biomedical Engineering, vol. 46, no. 3, pp. 300-310, March 1999.

Journals • 1998

- P. Thévenaz, M. Unser, "Geometric Aspects in 3D Biomedical Image Processing," Association suisse de microtechnique (schweizerische Gesellschaft für Mikrotechnik), Bulletin ASMT/SGMT no. 22, Microvision et capteurs optiques, Journées de microtechnique, Lausanne VD, Swiss Confederation, October 1-2, 1998, pp. 5-10.
- F. Müller, P. Brigger, K. Illgner, M. Unser, "Multiresolution Approximation Using Shifted Splines," IEEE Transactions on Signal Processing, vol. 46, no. 9, pp. 2555-2558, September 1998.
- P. Blanc, T. Blu, T. Ranchin, L. Wald, R. Aloisi, "Using Iterated Rational Filter Banks Within the ARSIS Concept for Producing 10 m Landsat Multispectral Images," International Journal of Remote Sensing, vol. 19, no. 12, pp. 2331-2343, August 1998.
- M. Unser, J. Zerubia, "A Generalized Sampling Theory without Band-Limiting Constraints," IEEE Transactions on Circuits and Systems—II: Analog and Digital Signal Processing, vol. 45, no. 8, pp. 959-969, August 1998.
- M. Unser, P. Thévenaz, A. Aldroubi, "Shift-Orthogonal Wavelet Bases," IEEE Transactions on Signal Processing, vol. 46, no. 7, pp. 1827-1836, July 1998.
- T. Blu, "A New Design Algorithm for Two-Band Orthonormal Rational Filter Banks and Orthonormal Rational Wavelets," IEEE Transactions on Signal Processing, vol. 46, no. 6, pp. 1494-1504, June 1998.
- C. Lee, M. Eden, M. Unser, "High-Quality Image Resizing Using Oblique Projection Operators," IEEE Transactions on Image Processing, vol. 7, no. 5, pp. 679-692, May 1998.
- C. Lee, S. Huh, T.A. Ketter, M. Unser, "Unsupervised Connectivity-Based Thresholding Segmentation of Midsagittal Brain MR Images," Computers in Biology and Medicine, vol. 28, no. 3, pp. 309-338, May 1998.
- A. Aldroubi, P. Abry, M. Unser, "Construction of Biorthogonal Wavelets Starting from Any Two Multiresolutions," IEEE Transactions on Signal Processing, vol. 46, no. 4, pp. 1130-1133, April 1998.
- U.E. Ruttimann, M. Unser, R.R. Rawlings, D. Rio, N.F. Ramsey, V.S. Mattay, D.W. Hommer, J.A. Frank, D.R. Weinberger, "Statistical Analysis of Functional MRI Data in the Wavelet Domain," IEEE Transactions on Medical Imaging, vol. 17, no. 2, pp. 142-154, April 1998.
- P. Thévenaz, U.E. Ruttimann, M. Unser, "A Pyramid Approach to Subpixel Registration Based on Intensity," IEEE Transactions on Image Processing, vol. 7, no. 1, pp. 27-41, January 1998.

Journals • 1997

- M. Unser, J. Zerubia, "Generalized Sampling: Stability and Performance Analysis," IEEE Transactions on Signal Processing, vol. 45, no. 12, pp. 2941-2950, December 1997.
- A. Bultheel, "Akram Aldroubi and Michael Unser, Eds.,
*Wavelets in Medicine and Biology*, CRC Press, Boca Raton, FL, 1996, 616 pp.," Journal of Approximation Theory, vol. 90, no. 3, pp. 458-459, September 1997. - M. Unser, I. Daubechies, "On the Approximation Power of Convolution-Based Least Squares
*versus*Interpolation," IEEE Transactions on Signal Processing, vol. 45, no. 7, pp. 1697-1711, July 1997. - M.J. Vrhel, C. Lee, M. Unser, "Rapid Computation of the Continuous Wavelet Transform by Oblique Projections," IEEE Transactions on Signal Processing, vol. 45, no. 4, pp. 891-900, April 1997.
- M.J. Vrhel, C. Lee, M. Unser, "Fast Continuous Wavelet Transform: A Least-Squares Formulation," Signal Processing, vol. 57, no. 2, pp. 103-119, March 1997.

Journals • 1996

- M. Unser, "Quasi-Orthogonality and Quasi-Projections," Applied and Computational Harmonic Analysis, vol. 3, no. 3, pp. 201-214, July 1996.
- M. Unser, P. Thévenaz, A. Aldroubi, "Erratum—Corrections to “Shift-Orthogonal Wavelet Bases Using Splines”," IEEE Signal Processing Letters, vol. 3, no. 5, pp. 162, May 1996.
- M. Unser, A. Aldroubi, "A Review of Wavelets in Biomedical Applications," Proceedings of the IEEE, vol. 84, no. 4, pp. 626-638, April 1996.
- M. Unser, "Approximation Power of Biorthogonal Wavelet Expansions," IEEE Transactions on Signal Processing, vol. 44, no. 3, pp. 519-527, March 1996.
- M. Unser, P. Thévenaz, A. Aldroubi, "Shift-Orthogonal Wavelet Bases Using Splines," IEEE Signal Processing Letters, vol. 3, no. 3, pp. 85-88, March 1996.

Journals • 1995

- M. Unser, "Texture Classification and Segmentation Using Wavelet Frames," IEEE Transactions on Image Processing, vol. 4, no. 11, pp. 1549-1560, November 1995.
- M. Unser, P. Thévenaz, L.P. Yaroslavsky, "Convolution-Based Interpolation for Fast, High-Quality Rotation of Images," IEEE Transactions on Image Processing, vol. 4, no. 10, pp. 1371-1381, October 1995.
- M. Unser, P. Thévenaz, C. Lee, U.E. Ruttimann, "Registration and Statistical Analysis of PET Images Using the Wavelet Transform," IEEE Engineering in Medecine and Biology Magazine, vol. 14, no. 5, pp. 603-611, September-October 1995.
- P. Thévenaz, H. Hügli, "Usefulness of the LPC-Residue in Text-Independent Speaker Verification," Speech Communication, vol. 17, no. 1-2, pp. 145-157, August 1995.
- M. Unser, A. Aldroubi, M. Eden, "Enlargement or Reduction of Digital Images with Minimum Loss of Information," IEEE Transactions on Image Processing, vol. 4, no. 3, pp. 247-258, March 1995.

Journals • 1994

- A. Aldroubi, M. Unser, "Sampling Procedures in Function Spaces and Asymptotic Equivalence with Shannon's Sampling Theory," Numerical Functional Analysis and Optimization, vol. 15, no. 1-2, pp. 1-21, 1994.
- S.J. Schiff, A. Aldroubi, M. Unser, S. Sato, "Fast Wavelet Transformation of EEG," Electroencephalography and Clinical Neurophysiology, vol. 91, no. 6, pp. 442-455, December 1994.
- M. Unser, A. Aldroubi, S.J. Schiff, "Fast Implementation of the Continuous Wavelet Transform with Integer Scales," IEEE Transactions on Signal Processing , vol. 42, no. 12, pp. 3519-3523, December 1994.
- M. Unser, A. Aldroubi, "A General Sampling Theory for Nonideal Acquisition Devices," IEEE Transactions on Signal Processing, vol. 42, no. 11, pp. 2915-2925, November 1994.
- A. Aldroubi, M. Eden, M. Unser, "Discrete Spline Filters for Multiresolution and Wavelets of
*l*_{2}," SIAM Journal on Mathematical Analysis, vol. 25, no. 5, pp. 1412-1432, September 1994. - M. Unser, "Fast Gabor-Like Windowed Fourier and Continuous Wavelet Transforms," IEEE Signal Processing Letters, vol. 1, no. 5, pp. 76-79, May 1994.
- M. Unser, M. Eden, "FIR Approximations of Inverse Filters and Perfect Reconstruction Filter Banks," Signal Processing, vol. 36, no. 2, pp. 163-174, March 1994.

Journals • 1993

- T. Blu, "Iterated Filter Banks with Rational Rate Changes Connection with Discrete Wavelet Transforms," IEEE Transactions on Signal Processing, vol. 41, no. 12, pp. 3232-3244, December 1993.
- K. Kashima, M. Unser, M.B. Datiles, B.L. Trus, P.A. Edwards, "Minimum Views Required to Characterize Cataracts when Using the Scheimpflug Camera," Graefe's Archive for Clinical and Experimental Ophthalmology, vol. 231, no. 12, pp. 687-691, December 1993.
- M. Unser, "On the Optimality of Ideal Filters for Pyramid and Wavelet Signal Approximation," IEEE Transactions on Signal Processing, vol. 41, no. 12, pp. 3591-3596, December 1993.
- A. Aldroubi, M. Unser, "Families of Multiresolution and Wavelet Spaces with Optimal Properties," Numerical Functional Analysis and Optimization, vol. 14, no. 5/6, pp. 417-446, October-December 1993.
- M. Unser, A. Aldroubi, M. Eden, "The
*L*_{2}-Polynomial Spline Pyramid," IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 15, no. 4, pp. 364-379, April 1993. - M. Unser, A. Aldroubi, M. Eden, "B-Spline Signal Processing: Part II—Efficient Design and Applications," IEEE Transactions on Signal Processing, vol. 41, no. 2, pp. 834-848, February 1993.
- M. Unser, A. Aldroubi, M. Eden, "B-Spline Signal Processing: Part I—Theory," IEEE-SPS best paper award, IEEE Transactions on Signal Processing, vol. 41, no. 2, pp. 821-833, February 1993.
- K. Kashima, B.L. Trus, M. Unser, P.A. Edwards, M.B. Datiles, "Aging Studies on Normal Lens Using the Scheimpflug Slit-Lamp Camera," Investigative Ophthalmology and Visual Science, vol. 34, no. 1, pp. 263-269, January 1993.
- M. Unser, A. Aldroubi, M. Eden, "A Family of Polynomial Spline Wavelet Transforms," Signal Processing, vol. 30, no. 2, pp. 141-162, January 1993.

Journals • 1992

- A. Aldroubi, B.L. Trus, M. Unser, F.P. Booy, A.C. Steven, "Magnification Mismatches Between Micrographs: Corrective Procedures and Implications for Structural Analysis," Ultramicroscopy, vol. 46, no. 1-4, pp. 175-188, October 1992.
- A. Aldroubi, M. Unser, M. Eden, "Cardinal Spline Filters: Stability and Convergence to the Ideal Sinc Interpolator," Signal Processing, vol. 28, no. 2, pp. 127-138, August 1992.
- M. Unser, "An Improved Least Squares Laplacian Pyramid for Image Compression," Signal Processing, vol. 27, no. 2, pp. 187-203, May 1992.
- M. Unser, M. Stone, "Automated Detection of the Tongue Surface in Sequences of Ultrasound Images," The Journal of the Acoustical Society of America, vol. 91, no. 5, pp. 3001-3007, May 1992.
- M. Unser, A. Aldroubi, M. Eden, "On the Asymptotic Convergence of B-Spline Wavelets to Gabor Functions," IEEE Transactions on Information Theory, vol. 38, no. 2, part II, pp. 864-872, March 1992.
- M. Unser, A. Aldroubi, M. Eden, "Polynomial Spline Signal Approximations: Filter Design and Asymptotic Equivalence with Shannon's Sampling Theorem," IEEE Transactions on Information Theory, vol. 38, no. 1, pp. 95-103, January 1992.

Journals • 1991

- A.C. Steven, E. Kocsis, M. Unser, B.L. Trus, "Spatial Disorders and Computational Cures," International Journal of Biological Macromolecules, vol. 13, no. 3, pp. 174-180, June 1991.
- M. Unser, "Comments on “Classification of Natural Textures by Means of Two-Dimensional Orthogonal Masks”, by P. Cohen, V. Lacasse and C.T. DeDinh," IEEE Transactions on Signal Processing, vol. 39, no. 4, pp. 1005-1006, April 1991.
- M. Unser, A. Aldroubi, M. Eden, "Fast B-Spline Transforms for Continuous Image Representation and Interpolation," IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 13, no. 3, pp. 277-285, March 1991.
- M. Unser, A. Aldroubi, M. Eden, "Recursive Regularization Filters: Design, Properties, and Applications," IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 13, no. 3, pp. 272-277, March 1991.
- A. Aldroubi, M. Unser, D. Tietz, B.L. Trus, "Computerized Methods for Analyzing Two-Dimensional Agarose Gel Electropherograms," Electrophoresis, vol. 12, no. 1, pp. 39-46, January 1991.
- L.X. Dong, G. Pelle, P. Brun, M. Unser, "Adaptive Myocardial Border Tracking in M-Mode Echocardiograms," Signal Processing, vol. 22, no. 1, pp. 95-105, January 1991.
- D. Tietz, A. Aldroubi, R. Schneerson, M. Unser, A. Chrambach, "The Distribution of Particles Characterized by Size and Free Mobility Within Polydisperse Populations of Protein-Polysaccharide Conjugates, Determined from Two-Dimensional Agarose Electropherograms," Electrophoresis, vol. 12, no. 1, pp. 46-54, January 1991.

Journals • 1990

- P. Thévenaz, "Text Independent Speaker Recognition," AGEN Mitteilungen, no. 52, pp. 35-45, November 1990.
- M. Unser, M. Eden, "Nonlinear Operators for Improving Texture Segmentation Based on Features Extracted by Spatial Filtering," IEEE Transactions on Systems, Man, and Cybernetics, vol. 20, no. 4, pp. 804-815, July-August 1990.
- P.A. Edwards, M.B. Datiles, M. Unser, B.L. Trus, V. Freidlin, K. Kashima, "Computerized Cataract Detection and Classification," Current Eye Research, vol. 9, no. 6, pp. 517-524, June 1990.
- M. Unser, "Improved Restoration of Noisy Images by Adaptive Least-Squares Post-Filtering," Signal Processing, vol. 20, no. 1, pp. 3-14, May 1990.
- M. Unser, M. Eden, "Weighted Averaging of a Set of Noisy Images for Maximum Signal-To-Noise Ratio," IEEE Transactions on Acoustics, Speech, and Signal Processing, vol. 38, no. 5, pp. 890-895, May 1990.

Journals • 1989

- M. Unser, B.L. Trus, J.A. Frank, A.C. Steven, "The Spectral Signal-To-Noise Ratio Resolution Criterion: Computational Efficiency and Statistical Precision," Ultramicroscopy, vol. 30, no. 3, pp. 429-434, July-August 1989.
- M. Unser, B.L. Trus, A.C. Steven, "Normalization Procedures and Factorial Representations for Classification of Correlation-Aligned Images: A Comparative Study," Ultramicroscopy, vol. 30, no. 3, pp. 299-310, July-August 1989.
- M. Unser, M. Eden, "Multiresolution Feature Extraction and Selection for Texture Segmentation," IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 11, no. 7, pp. 717-728, July 1989.
- M. Unser, B.L. Trus, M. Eden, "Iterative Restoration of Noisy Elastically Distorted Periodic Images," Signal Processing, vol. 17, no. 3, pp. 191-200, July 1989.
- B.L. Trus, A.C. Steven, A.W. McDowall, M. Unser, J. Dubochet, R.J. Podolsky, "Interactions Between Actin and Myosin Filaments in Skeletal Muscle Visualized in Frozen-Hydrated Thin Sections," Biophysical Journal, vol. 55, no. 4, pp. 713-724, April 1989.
- M. Unser, G. Pelle, P. Brun, M. Eden, "Automated Extraction of Serial Myocardial Borders from M-Mode Echocardiograms," IEEE Transactions on Medical Imaging, vol. 8, no. 1, pp. 96-103, March 1989.

Journals • 1988

- M. Unser, M.G. Amin, "Comments, with Reply, on “A New Approach to Recursive Fourier Transform”," Proceedings of the IEEE, vol. 76, no. 10, pp. 1395-1396, October 1988.
- M. Unser, M. Eden, "Maximum Likelihood Estimation of Linear Signal Parameters for Poisson Processes," IEEE Transactions on Acoustics, Speech, and Signal Processing, vol. 36, no. 6, pp. 942-945, June 1988.
- A.C. Steven, B.L. Trus, J.V. Maizel, M. Unser, D.A. Parry, J.S. Wall, J.F. Hainfeld, F.W. Studier, "Molecular Substructure of a Viral Receptor-Recognition Protein. The gp17 Tail-Fiber of Bacteriophage T7," Journal of Molecular Biology, vol. 200, no. 2, pp. 351-365, March 1988.

Journals • 1987

- M. Unser, J.R. Ellis, T. Pun, M. Eden, "Optimal Background Estimation in EELS," Journal of Microscopy, vol. 145, part III, pp. 245-256, March 1987.
- M. Unser, M. Eden, B.L. Trus, "Unwarping of Slightly Distorted Periodic Structures Using Bidimensional Polynomial Representations," Signal Processing, vol. 12, no. 1, pp. 83-91, January 1987.
- M. Unser, B.L. Trus, A.C. Steven, "A New Resolution Criterion Based on Spectral Signal-To-Noise Ratios," Ultramicroscopy, vol. 23, no. 1, pp. 39-51, 1987.

Journals • 1986

- M. Unser, "Local Linear Transforms for Texture Measurements," Signal Processing, vol. 11, no. 1, pp. 61-79, July 1986.
- M. Eden, M. Unser, R. Leonardi, "Polynomial Representation of Pictures," Signal Processing, vol. 10, no. 4, pp. 385-393, June 1986.
- M. Unser, "Sum and Difference Histograms for Texture Classification," IEEE Transactions on Pattern Analysis and Machine Intelligence, vol. 8, no. 1, pp. 118-125, January 1986.
- M. Unser, A.C. Steven, B.L. Trus, "Odd Men Out: A Quantitative Objective Procedure for Identifying Anomalous Members of a Set of Noisy Images of Ostensibly Identical Specimens," Ultramicroscopy, vol. 19, no. 4, pp. 337-347, 1986.

Journals • 1984

- M. Unser, "On the Approximation of the Discrete Karhunen-Loève Transform for Stationary Processes," Signal Processing, vol. 7, no. 3, pp. 231-249, December 1984.
- M. Unser, "Recursion in Short-Time Signal Analysis," Signal Processing, vol. 5, no. 3, pp. 229-240, May 1984.
- M. Unser, F. Ade, "Feature Extraction and Decision Procedure for Automated Inspection of Textured Materials," Pattern Recognition Letters, vol. 2, no. 3, pp. 185-191, March 1984.

### Conference Papers

Conference Papers • 2022

- Y. Kesenci, A. Boquet-Pujadas, E. van Bodegraven, S. Étienne-Manneville, E. Labruyère, J.-C. Olivo-Marin, "PDE-Constrained Optimization for Nuclear Mechanics," Proceedings of the 2022 Twenty-Ninth IEEE International Conference on Image Processing (ICIP'22), Bordeaux, French Republic, October 16-19, 2022, pp. 2192-2195.
- J. Dong, E. Börve, M. Rafayelyan, M. Unser, "Asymptotic Stability in Reservoir Computing," Proceedings of the 2022 International Joint Conference on Neural Networks (IJCNN'22), Padua, Italian Republic, July 18-23, 2022, 8 p.
- P. del Aguila Pla, M. Unser, "
*Bona Fide*Riesz Projections for Density Estimation," Proceedings of the Forty-Seventh IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'22), Singapore, Republic of Singapore, May 22-27, 2022, pp. 5613-5616.

Conference Papers • 2021

- M. Pourya, S. Aziznejad, M. Unser, D. Sage, "GRAPHIC: Graph-Based Hierarchical Clustering for Single-Molecule Localization Microscopy," Proceedings of the Eighteenth IEEE International Symposium on Biomedical Imaging (ISBI'21), Nice, French Republic, April 13-16, 2021, pp. 1892-1896.
- T.-a. Pham, E. Soubies, F. Soulez, M. Unser, "Diffraction Tomography from Single-Molecule Localization Microscopy: Numerical Feasibility," Best student paper award, Proceedings of the Eighteenth IEEE International Symposium on Biomedical Imaging (ISBI'21), Nice, French Republic, April 13-16, 2021, pp. 854-857.
- Q. Denoyelle, T.-a. Pham, P. del Aguila Pla, D. Sage, M. Unser, "Optimal-Transport-Based Metric for SMLM," Proceedings of the Eighteenth IEEE International Symposium on Biomedical Imaging (ISBI'21), Nice, French Republic, April 13-16, 2021, pp. 797-801.
- S. Aziznejad, E. Soubies, M. Unser, "Dictionary Learning with Statistical Sparsity in the Presence of Noise," Proceedings of the Twenty-Eighth European Signal Processing Conference (EUSIPCO'20), Amsterdam, Kingdom of the Netherlands, Virtual, January 18-22, 2021, pp. 2026-2029.

Conference Papers • 2020

- M.F. Naeem, S.J. Oh, Y. Uh, Y. Choi, J. Yoo, "Reliable Fidelity and Diversity Metrics for Generative Models," Proceedings of the Thirty-Seventh International Conference on Machine Learning (ICML'20), Virtual, July 13-18, 2020.
- J. Yoo, N. Ahn, K.-A. Sohn, "Rethinking Data Augmentation for Image Super-Resolution: A Comprehensive Analysis and a New Strategy," Proceedings of the 2020 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'20), Virtual, June 14-19, 2020, pp. 8375-8384.
- N. Ahn, J. Yoo, K.-A. Sohn, "SimUSR: A Simple But Strong Baseline for Unsupervised Image Super-Resolution," Proceedings of the 2020 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'20), Virtual, June 14-19, 2020, pp. 1953-1961.
- P. del Aguila Pla, L. Pellaco, S. Dwivedi, P. Händel, J. Jaldén, "Clock Synchronization over Networks Using Sawtooth Models," Proceedings of the Forty-Fifth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'20), Barcelona, Kingdom of Spain, May 4-8, 2020, pp. 5945-5949.
- P. Bohra, M. Unser, "Computation of "Best" Interpolants in the
*L*_{p}Sense," Proceedings of the Forty-Fifth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'20), Barcelona, Kingdom of Spain, May 4-8, 2020, pp. 5505-5509. - T. Debarre, B. Watts, B. Rösner, M. Unser, "Hessian Splines for Scanning Transmission x-Ray Microscopy," Proceedings of the Seventeenth IEEE International Symposium on Biomedical Imaging (ISBI'20), Iowa City IA, USA, April 5-7, 2020, pp. 199-202.
- T.-a. Pham, E. Soubies, A. Ayoub, D. Psaltis, M. Unser, "Adaptive Regularization for Three-Dimensional Optical Diffraction Tomography," Proceedings of the Seventeenth IEEE International Symposium on Biomedical Imaging (ISBI'20), Iowa City IA, USA, April 5-7, 2020, pp. 182-186.

Conference Papers • 2019

- S. Aziznejad, A. Naderi, M. Unser, "Optimal Spline Generators for Derivative Sampling," Proceedings of the Thirteenth International Conference on Sampling Theory and Applications (SampTA'19), Bordeaux, French Republic, July 8-12, 2019, pp. 1-4.
- T. Debarre, J. Fageot, H. Gupta, M. Unser, "Solving Continuous-Domain Problems Exactly with Multiresolution B-Splines," Proceedings of the Forty-Fourth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'19), Brighton, United Kingdom, May 12-17, 2019, pp. 5122-5126.
- S. Aziznejad, M. Unser, "Deep Spline Networks with Control of Lipschitz Regularity," Best student paper award, Proceedings of the Forty-Fourth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'19), Brighton, United Kingdom, May 12-17, 2019, pp. 3242-3246.
- L. Romani, A. Badoual, M. Unser, "Normal-Based Interpolating Subdivision for the Geometric Representation of Deformable Models," Proceedings of the Sixteenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'19), Venice, Italian Republic, April 8-11, 2019, pp. 1839-1843.
- A. Badoual, A. Galan, D. Sage, M. Unser, "Deforming Tessellations for the Segmentation of Cell Aggregates," Proceedings of the Sixteenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'19), Venice, Italian Republic, April 8-11, 2019, pp. 1013-1017.
- T.-a. Pham, E. Soubies, D. Sage, M. Unser, "Closed-Form Expression of the Fourier Ring-Correlation for Single-Molecule Localization Microscopy," Best student paper award, Proceedings of the Sixteenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'19), Venice, Italian Republic, April 8-11, 2019, pp. 321-324.
- E. Soubies, L. Blanc-Féraud, S. Schaub, E. Van Obberghen-Schilling, "Improving 3D MA-TIRF Reconstruction with Deconvolution and Background Estimation," Proceedings of the Sixteenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'19), Venice, Italian Republic, April 8-11, 2019, pp. 316-320.
- L. Donati, E. Soubies, M. Unser, "Inner-Loop-Free ADMM for Cryo-EM," Proceedings of the Sixteenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'19), Venice, Italian Republic, April 8-11, 2019, pp. 307-311.

Conference Papers • 2018

- M. Fröhlich, C. Bolinhas, A. Depeursinge, A. Widmer, N. Chevrey, P. Hagmann, C. Simon, V.B.C. Kokje, S. Gobron, "Holographic Visualisation and Interaction of Fused CT, PET and MRI Volumetric Medical Imaging Data Using Dedicated Remote GPGPU Ray Casting," Proceedings of Simulation, Image Processing, and Ultrasound Systems for Assisted Diagnosis and Navigation: International Workshops, POCUS 2018, BIVPCS 2018, CuRIOUS 2018, and CPM 2018, Held in Conjunction with MICCAI 2018, Granada, Kingdom of Spain, September 16-20, 2018, [Lecture Notes in Computer Science, vol. 11042, Springer, 2018], pp. 102-110.
- A. Depeursinge, J. Fageot, V. Andrearczyk, J.P. Ward, M. Unser, "Rotation Invariance and Directional Sensitivity: Spherical Harmonics
*versus*Radiomics Features," Proceedings of the Ninth International Conference on Machine Learning in Medical Imaging (MLMI'18), Granada, Kingdom of Spain, September 16, 2018, [Lecture Notes in Computer Science, vol. 11046, Springer, 2018], pp. 107-115. - T.-a. Pham, E. Soubies, J. Lim, A. Goy, F. Soulez, D. Psaltis, M. Unser, "Phaseless Diffraction Tomography with Regularized Beam Propagation," Proceedings of the Fifteenth IEEE International Symposium on Biomedical Imaging (ISBI'18), Washington DC, USA, April 4-7, 2018, pp. 1268-1271.
- K.H. Jin, M. Unser, "3D BPConvNet to Reconstruct Parallel MRI," Proceedings of the Fifteenth IEEE International Symposium on Biomedical Imaging (ISBI'18), Washington DC, USA, April 4-7, 2018, pp. 361-364.
- M.T. McCann, L. Vilaclara, M. Unser, "Region of Interest x-Ray Computed Tomography via Corrected Back Projection," Proceedings of the Fifteenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'18), Washington DC, USA, April 4-7, 2018, pp. 65-69.
- J. Lim, A. Goy, M.H. Shoreh, M. Unser, D. Psaltis, "Imaging Complex Objects Using Learning Tomography," Proceedings of the SPIE Photonics West Biophotonics, Biomedical Optics, and Imaging Conference on Quantitative Phase Imaging IV (SPIE-QPI'18), San Francisco CA, USA, January 27-February 1, 2018, vol. 10503-1T, pp. 105031T-1–105031T-6.

Conference Papers • 2017

- C. Haubold, V. Uhlmann, M. Unser, F.A. Hamprecht, "Diverse
*M*-Best Solutions by Dynamic Programming," Proceedings of the Thirty-Ninth German Conference on Pattern Recognition (GCPR'17), Basel BS, Swiss Confederation, September 13-15, 2017, [Lecture Notes on Image Processing, Computer Vision, Pattern Recognition, and Graphics, vol. 10496, Springer, 2016], pp. 255-267. - E. Soubies, L. Blanc-Féraud, G. Aubert, "Quelles relaxations continues pour le critère ℓ
_{2}-ℓ_{0}?," Proceedings of the Twenty-Sixth GRETSI Symposium on Signal and Image Processing (GRETSI'17), Juan-les-Pins, French Republic, September 5-8, 2017, paper no. ID252. - P. Pad, F. Salehi, E. Celis, P. Thiran, M. Unser, "Dictionary Learning Based on Sparse Distribution Tomography," Proceedings of the Thirty-Fourth International Conference on Machine Learning (ICML'17), Sydney, Commonwealth of Australia, August 6-11, 2017, pp. 2731-2740.
- M. Unser, E. Soubies, F. Soulez, M. McCann, L. Donati, "GlobalBioIm: A Unifying Computational Framework for Solving Inverse Problems," Proceedings of the OSA Imaging and Applied Optics Congress on Computational Optical Sensing and Imaging (COSI'17), San Francisco CA, USA, June 26-29, 2017, paper no. CTu1B.
- H. Gupta, D. Schmitter, V. Uhlmann, M. Unser, "General Surface Energy for Spinal Cord and Aorta Segmentation," Proceedings of the Fourteenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'17), Melbourne, Commonwealth of Australia, April 18-21, 2017, pp. 319-322.
- D. Schmitter, M. Unser, "Closed-Form Alignment of Active Surface Models Using Splines," Proceedings of the Fourteenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'17), Melbourne, Commonwealth of Australia, April 18-21, 2017, pp. 219-222.
- L. Donati, M. Nilchian, M. Unser, S. Trépout, C. Messaoudi, S. Marco, "Compressed Sensing for Dose Reduction in STEM Tomography," Proceedings of the Fourteenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'17), Melbourne, Commonwealth of Australia, April 18-21, 2017, pp. 23-27.
- M.H. Shoreh, A. Goy, J. Lim, U. Kamilov, M. Unser, D. Psaltis, "Optical Tomography Based on a Nonlinear Model that Handles Multiple Scattering," Proceedings of the Forty-Second IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'17), New Orleans LA, USA, March 5-9, 2017, pp. 6220-6224.

Conference Papers • 2016

- D. Schmitter, P. García-Amorena, M. Unser, "Smoothly Deformable Spheres: Modeling, Deformation, and Interaction," Proceedings of the 2016 ACM Special Interest Group on Computer Graphics and Interactive Techniques Conference Asia: Technical Briefs (SIGGRAPH-TB'16), Macau, Macao Special Administrative Region of the People's Republic of China, December 5-8, 2016, paper no. 2.
- O.S. Al-Kadi, D. Van De Ville, A. Depeursinge, "Multidimensional Texture Analysis for Improved Prediction of Ultrasound Liver Tumor Response to Chemotherapy Treatment," Proceedings of the Nineteenth International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI'16), Aθήνα (Athens), Ελληνική Δημοκρατία (Hellenic Republic), October 17-21, 2016, [Lecture Notes in Computer Science, vol. 9900, Springer, 2016], pp. 619-626.
- A. Badoual, D. Schmitter, M. Unser, "Local Refinement for 3D Deformable Parametric Surfaces," Proceedings of the 2016 Twenty-Third IEEE International Conference on Image Processing (ICIP'16), Phoenix AZ, USA, September 25-28, 2016, pp. 1086-1090.
- M.T. McCann, M. Nilchian, M. Unser, "Slice-by-Slice
*versus*Fully 3D Reconstruction for Parallel-Beam x-Ray Microtomography," Proceedings of Imaging and Applied Optics: OSA Optics & Photonics Congress, Mathematics in Imaging (OSA-MI'16), Heidelberg, Federal Republic of Germany, July 25-28, 2016, paper no. MW5H.4. - M. Unser, "Characterization of the Solution of Linear Inverse Problems with Generalized TV Regularization," Proceedings of Imaging and Applied Optics: OSA Optics & Photonics Congress, Mathematics in Imaging (OSA-MI'16), Heidelberg, Federal Republic of Germany, July 25-28, 2016, paper no. MW5H.1.
- F. Soulez, M. Unser, "Superresolution with Optically-Motivated Blind Deconvolution," Proceedings of Imaging and Applied Optics: OSA Optics & Photonics Congress, Joint Applied Industrial Optics & Computational Optical Sensing and Imaging (OSA-AIO/COSI'16), Heidelberg, Federal Republic of Germany, July 25-28, 2016, paper no. JT3A.38.
- U.S. Kamilov, I.N. Papadopoulos, M.H. Shoreh, A. Goy, C. Vonesch, M. Unser, D. Psaltis, "Learning from Examples in Optical Imaging," Proceedings of Imaging and Applied Optics: OSA Optics & Photonics Congress, Computational Optical Sensing and Imaging (OSA-COSI'16), Heidelberg, Federal Republic of Germany, July 25-28, 2016, paper no. CT1D.1.
- A. Schutz, A. Ferrari, É. Thiébaut, F. Soulez, M. Vannier, D. Mary, "Interbands Phase Models for Polychromatic Image Reconstruction in Optical Interferometry," Proceedings of the SPIE Astronomical Telescopes + Instrumentation Conference on Optical and Infrared Interferometry and Imaging V (SPIE-ATI'16), Edinburgh, United Kingdom, June 27-July 1, 2016, vol. 9907, pp. 99073K-1/99073K-9.
- A. Schutz, É. Thiébaut, F. Soulez, M. Tallon, G. Duvert, I. Tallon-Bosc, "Effective
*a posteriori*Co-Phasing of Interferometric Fringe Data," Proceedings of the SPIE Astronomical Telescopes + Instrumentation Conference on Optical and Infrared Interferometry and Imaging V (ATI'16), Edinburgh, United Kingdom, June 27-July 1, 2016, vol. 9907, pp. 99073D-1/99073D-9. - M. Ozon, É. Thiébaut, F. Soulez, J. Léger, "Global Optimization for Image Restoration in Optical/IR Interferometry," Proceedings of the SPIE Astronomical Telescopes + Instrumentation Conference on Optical and Infrared Interferometry and Imaging V (SPIE-ATI'16), Edinburgh, United Kingdom, June 27-July 1, 2016, vol. 9907, pp. 99071E-1/99071E-11.
- F. Soulez, É. Thiébaut, J. Kluska, M. Tallon, A. Schutz, A. Ferrari, "Direct Temperature Map Estimation in Optical Long Baseline Interferometry," Proceedings of the SPIE Astronomical Telescopes + Instrumentation Conference on Optical and Infrared Interferometry and Imaging V (SPIE-ATI'16), Edinburgh, United Kingdom, June 27-July 1, 2016, vol. 9907, pp. 99070Z-1/99070Z-5.
- F. Soulez, F. Courbin, M. Unser, "Back-Propagating the Light of Field Stars to Probe Telescope Mirrors Aberrations," Proceedings of the SPIE Astronomical Telescopes + Instrumentation Conference on Advances in Optical and Mechanical Technologies for Telescopes and Instrumentation II (SPIE-ATI'16), Edinburgh, United Kingdom, June 26-July 1, 2016, vol. 9912, pp. 991277-1/991277-7.
- É. Thiébaut, L. Denis, F. Soulez, R. Mourya, "Spatially Variant PSF Modeling and Image Deblurring," Proceedings of the SPIE Astronomical Telescopes + Instrumentation Conference on Adaptive Optics Systems V (SPIE-ATI'16), Edinburgh, United Kingdom, June 26-July 1, 2016, vol. 9909, pp. 99097N-1/99097N-10.
- A. Badoual, M. Gérard, B. de Leener, N. Abi-Jaoudeh, S. Kadoury, "3D Vascular Path Planning of Chemo-Embolizations Using Segmented Hepatic Arteries from MR Angiography," Proceedings of the Thirteenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'16), Prague, Czech Republic, April 13-16, 2016, pp. 1346-1349.
- V. Uhlmann, R. Delgado-Gonzalo, M. Unser, P.O. Michel, L. Baldi, F.M. Wurm, "User-Friendly Image-Based Segmentation and Analysis of Chromosomes," Proceedings of the Thirteenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'16), Prague, Czech Republic, April 13-16, 2016, pp. 395-398.
- D. Fortun, P. Guichard, N. Chu, M. Unser, "Isotropic Resolution in Fluorescence Imaging by Single Particle Reconstruction," Proceedings of the Thirteenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'16), Prague, Czech Republic, April 13-16, 2016, pp. 249-252.
- P. Tohidi, E. Bostan, P. Pad, M. Unser, "MMSE Denoising of Sparse and Non-Gaussian AR(1) Processes," Proceedings of the Forty-First IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'16), Shanghai, People's Republic of China, March 20-25, 2016, pp. 4333-4337.
- M. Gérard, A. Tang, A. Badoual, F. Michaud, A. Bigot, G. Soulez, S. Kadoury, "Visualization of Hepatic Arteries with 3D Ultrasound During Intra-Arterial Therapies," Proceedings of the SPIE International Symposium on Medical Imaging: Image-Guided Procedures, Robotic Interventions, and Modeling (SPIE-IGPRIM'16), San Diego CA, USA, February 27-March 3, 2016, vol. 9786, pp. 97862I-1–97862I-7.

Conference Papers • 2015

- S. Otálora, A. Cruz-Roa, J. Arevalo, M. Atzori, A. Madabhushi, A.R. Judkins, F. González, H. Müller, A. Depeursinge, "Combining Unsupervised Feature Learning and Riesz Wavelets for Histopathology Image Representation: Application to Identifying Anaplastic Medulloblastoma," Proceedings of the Eighteenth International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI'15), Münich, Federal Republic of Germany, October 5-9, 2015, [Lecture Notes in Computer Science, vol. 9349, Springer, 2015], pp. 581-588.
- A. Badoual, D. Schmitter, M. Unser, "Locally Refinable Parametric Snakes," Proceedings of the 2015 Twenty-Second IEEE International Conference on Image Processing (ICIP'15), Québec QC, Canada, September 27-30, 2015, paper no. TEC-P21.2.
- D. Schmitter, C. Gaudet-Blavignac, D. Piccini, M. Unser, "New Parametric 3D Snake for Medical Segmentation of Structures with Cylindrical Topology," Best student paper award, Proceedings of the 2015 Twenty-Second IEEE International Conference on Image Processing (ICIP'15), Québec QC, Canada, September 27-30, 2015, paper no. TEC-P21.1.
- J. Min, L. Carlini, M. Unser, S. Manley, J.C. Ye, "Fast Live Cell Imaging at Nanometer Scale Using Annihilating Filter-Based Low-Rank Hankel Matrix Approach," Proceedings of the SPIE Optics and Photonics 2015 Conference on Wavelets and Sparsity XVI, San Diego CA, USA, August 10-12, 2015, vol. 9597, pp. 95970V-1/95970V-8.
- S. Rangan, A.K. Fletcher, P. Schniter, U.S. Kamilov, "Inference for Generalized Linear Models via Alternating Directions and Bethe Free Energy Minimization," Proceedings of the 2015 IEEE International Symposium on Information Theory (ISIT'15), Hong Kong, People's Republic of China, June 14-19, 2015, pp. 1640-1644.
- M. Baust, L. Demaret, M. Storath, N. Navab, A. Weinmann, "Total Variation Regularization of Shape Signals," Proceedings of the 2015 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'15), Boston MA, USA, June 7-12, 2015, pp. 2075-2083.
- J.P. Ward, J. Fageot, M. Unser, "Compressibility of Symmetric-α-Stable Processes," Proceedings of the Eleventh International Workshop on Sampling Theory and Applications (SampTA'15), Washington DC, USA, May 25-29, 2015, pp. 236-240.
- J. Fageot, J.P. Ward, M. Unser, "Interpretation of Continuous-Time Autoregressive Processes as Random Exponential Splines," Proceedings of the Eleventh International Workshop on Sampling Theory and Applications (SampTA'15), Washington DC, USA, May 25-29, 2015, pp. 231-235.
- V. Uhlmann, J. Fageot, H. Gupta, M. Unser, "Statistical Optimality of Hermite Splines," Proceedings of the Eleventh International Workshop on Sampling Theory and Applications (SampTA'15), Washington DC, USA, May 25-29, 2015, pp. 226-230.
- M. Unser, "Sampling and (Sparse) Stochastic Processes: A Tale of Splines and Innovation," Proceedings of the Eleventh International Workshop on Sampling Theory and Applications (SampTA'15), Washington DC, USA, May 25-29, 2015, pp. 221-225.
- H.Q. Nguyen, M. Unser, "Generalized Poisson Summation Formula for Tempered Distributions," Proceedings of the Eleventh International Workshop on Sampling Theory and Applications (SampTA'15), Washington DC, USA, May 25-29, 2015, pp. 1-5.
- D. Schmitter, M. Unser, "Similarity-Based Shape Priors for 2D Spline Snakes," Proceedings of the Twelfth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'15), Brooklyn NY, USA, April 16-19, 2015, pp. 1216-1219.
- V. Uhlmann, M. Unser, "Tip-Seeking Active Contours for Bioimage Segmentation," Proceedings of the Twelfth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'15), Brooklyn NY, USA, April 16-19, 2015, pp. 544-547.
- Z. Püspöki, J.P. Ward, D. Sage, M. Unser, "Fast Detection and Refined Scale Estimation Using Complex Isotropic Wavelets," Proceedings of the Twelfth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'15), Brooklyn NY, USA, April 16-19, 2015, pp. 512-515.
- A. Depeursinge, P. Pad, A.S. Chin, A.N. Leung, D.L. Rubin, H. Müller, M. Unser, "Optimized Steerable Wavelets for Texture Analysis of Lung Tissue in 3-D CT: Classification of Usual Interstitial Pneumonia," Proceedings of the Twelfth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'15), Brooklyn NY, USA, April 16-19, 2015, pp. 403-406.

Conference Papers • 2014

- J. Fageot, E. Bostan, M. Unser, "Statistics of Wavelet Coefficients for Sparse Self-Similar Images," Proceedings of the 2014 Twenty-First IEEE International Conference on Image Processing (ICIP'14), Paris, French Republic, October 27-30, 2014, pp. 6096-6100.
- M. Storath, A. Weinmann, M. Unser, "Unsupervised Texture Segmentation Using Monogenic Curvelets and the Potts Model," Proceedings of the 2014 Twenty-First IEEE International Conference on Image Processing (ICIP'14), Paris, French Republic, October 27-30, 2014, pp. 4348-4352.
- E. Bostan, E. Froustey, B. Rappaz, É. Shaffer, D. Sage, M. Unser, "Phase Retrieval by Using Transport-of-Intensity Equation and Differential Interference Contrast Microscopy," Proceedings of the 2014 Twenty-First IEEE International Conference on Image Processing (ICIP'14), Paris, French Republic, October 27-30, 2014, pp. 3939-3943.
- P. Pad, V. Uhlmann, M. Unser, "VOW: Variance-Optimal Wavelets for the Steerable Pyramid," Best student paper award, Proceedings of the 2014 Twenty-First IEEE International Conference on Image Processing (ICIP'14), Paris, French Republic, October 27-30, 2014, pp. 2973-2977.
- S. Kromwijk, S. Lefkimmiatis, M. Unser, "High-Performance 3D Deconvolution of Fluorescence Micrographs," Proceedings of the 2014 Twenty-First IEEE International Conference on Image Processing (ICIP'14), Paris, French Republic, October 27-30, 2014, pp. 1718-1722.
- E. Froustey, E. Bostan, S. Lefkimmiatis, M. Unser, "Digital Phase Reconstruction via Iterative Solutions of Transport-of-Intensity Equation," Proceedings of the Thirteenth IEEE Workshop on Information Optics (WIO'14), Neuchâtel NE, Switzerland, July 7-11, 2014, pp. 1-3.
- M. Lee, J.P. Ward, M. Unser, J.C. Ye, "Multiscale Interior Tomography Using 1D Generalized Total Variation," Proceedings of The Third International Conference on Image Formation in x-Ray Computed Tomography, Salt Lake City UT, USA, June 22-25, 2014, pp. 347-350.
- C. Conti, L. Romani, V. Uhlmann, M. Unser, "Cardinal Hermite Exponential Splines: Theoretical Insights and Applications to Active Contours," Proceedings of the Eighth International Conference Curves and Surfaces (ICCS'14), Paris, French Republic, June 12-18, 2014, pp. 74.
- M. Unser, P. Pad, "Matched Wavelet-Like Bases for the Decoupling of Sparse Stochastic Processes," Proceedings of the Eighth International Conference Curves and Surfaces (ICCS'14), Paris, French Republic, June 12-18, 2014, pp. 68.
- V. Uhlmann, R. Delgado-Gonzalo, C. Conti, L. Romani, M. Unser, "Exponential Hermite Splines for the Analysis of Biomedical Images," Proceedings of the Thirty-Ninth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'14), Firenze, Italian Republic, May 4-9, 2014, pp. 1650-1653.
- Z. Püspöki, M. Unser, "Wavelet-Based Identification and Classification of Local Symmetries in Microscopy Images," Proceedings of the Eleventh IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'14), Beijing, People's Republic of China, April 29-May 2, 2014, pp. 1035-1038.
- V. Uhlmann, R. Delgado-Gonzalo, M. Unser, "Snakes with Tangent-Based Control and Energies for Bioimage Analysis," Proceedings of the Eleventh IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'14), Beijing, People's Republic of China, April 29-May 2, 2014, pp. 806-809.
- D. Schmitter, R. Delgado-Gonzalo, G. Krueger, M. Unser, "Atlas-Free Brain Segmentation in 3D Proton-Density-Like MRI Images," Proceedings of the Eleventh IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'14), Beijing, People's Republic of China, April 29-May 2, 2014, pp. 629-632.

Conference Papers • 2013

- J.K. Mogali, N. Nallapareddy, C.S. Seelamantula, M. Unser, "A Shape-Template Based Two-Stage Corpus Callosum Segmentation Technique for Sagittal Plane T1-Weighted Brain Magnetic Resonance Images," Proceedings of the 2013 Twentieth IEEE International Conference on Image Processing (ICIP'13), Melbourne VIC, Commonwealth of Australia, September 27-30, 2013, pp. 1177-1181.
- D. Sage, H. Kirshner, C. Vonesch, S. Lefkimmiatis, M. Unser, "Benchmarking Image-Processing Algorithms for Biomicroscopy: Reference Datasets and Perspectives," Proceedings of the Twenty-First European Signal Processing Conference (EUSIPCO'13), Marrakech, Kingdom of Morocco, September 9-13, 2013, paper no. 1569744665.
- M. Unser, D. Sage, R. Delgado-Gonzalo, "Advanced Image Processing for Biology, and the Open Bio Image Alliance (OBIA)," Proceedings of the Twenty-First European Signal Processing Conference (EUSIPCO'13), Marrakech, Kingdom of Morocco, September 9-13, 2013, paper no. 1569744383.
- A. Amini, M. Unser, "Optimal Interpolation Laws for Stable AR(1) Processes," Proceedings of the Tenth International Workshop on Sampling Theory and Applications (SampTA'13), Bremen, Federal Republic of Germany, July 1-5, 2013, pp. 380-383.
- H. Kirshner, J.P. Ward, M. Unser, "Identification of Rational Transfer Functions from Sampled Data," Proceedings of the Tenth International Workshop on Sampling Theory and Applications (SampTA'13), Bremen, Federal Republic of Germany, July 1-5, 2013, pp. 341-343.
- K. Kim, J. Min, L. Carlini, M. Unser, S. Manley, D. Jeon, J.C. Ye, "Fast Maximum Likelihood High-Density Low-SNR Super-Resolution Localization Microscopy," Proceedings of the Tenth International Workshop on Sampling Theory and Applications (SampTA'13), Bremen, Federal Republic of Germany, July 1-5, 2013, pp. 285-288.
- E. Bostan, J. Fageot, U.S. Kamilov, M. Unser, "MAP Estimators for Self-Similar Sparse Stochastic Models," Proceedings of the Tenth International Workshop on Sampling Theory and Applications (SampTA'13), Bremen, Federal Republic of Germany, July 1-5, 2013, pp. 197-199.
- S. Lefkimmiatis, A. Roussos, M. Unser, P. Maragos, "Convex Generalizations of Total Variation Based on the Structure Tensor with Applications to Inverse Problems," Proceedings of the Fourth International Conference on Scale Space and Variational Methods in Computer Vision (SSVM'13), Seggauberg, Republic of Austria, June 2-6, 2013, pp. 48-60.
- U.S. Kamilov, A. Bourquard, E. Bostan, M. Unser, "Autocalibrated Signal Reconstruction from Linear Measurements Using Adaptive GAMP," Proceedings of the Thirty-Eighth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'13), Vancouver BC, Canada, May 26-31, 2013, pp. 5925-5928.
- P. Pad, M. Unser, "On the Optimality of Operator-Like Wavelets for Sparse AR(1) Processes," Proceedings of the Thirty-Eighth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'13), Vancouver BC, Canada, May 26-31, 2013, pp. 5598-5602.
- B. Tekin, U.S. Kamilov, E. Bostan, M. Unser, "Benefits of Consistency in Image Denoising with Steerable Wavelets," Proceedings of the Thirty-Eighth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'13), Vancouver BC, Canada, May 26-31, 2013, pp. 1355-1358.
- Z. Püspöki, C. Vonesch, M. Unser, "Detection of Symmetric Junctions in Biological Images Using 2-D Steerable Wavelet Transforms," Proceedings of the Tenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'13), San Francisco CA, USA, April 7-11, 2013, pp. 1488-1491.
- M. Nilchian, C. Vonesch, P. Modregger, M. Stampanoni, M. Unser, "Iterative FBP for Improved Reconstruction of x-Ray Differential Phase-Contrast Tomograms," Proceedings of the Tenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'13), San Francisco CA, USA, April 7-11, 2013, pp. 1248-1251.
- P.D. Tafti, E. Bostan, M. Unser, "Variational Decomposition of Vector Fields in the Presence of Noise," Proceedings of the Tenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'13), San Francisco CA, USA, April 7-11, 2013, pp. 1162-1165.
- H. Kirshner, A. Bourquard, J.P. Ward, M. Unser, "Linear Interpolation of Biomedical Images Using a Data-Adaptive Kernel," Proceedings of the Tenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'13), San Francisco CA, USA, April 7-11, 2013, pp. 926-929.
- C. Vonesch, F. Stauber, M. Unser, "Design of Steerable Filters for the Detection of Micro-Particles," Proceedings of the Tenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'13), San Francisco CA, USA, April 7-11, 2013, pp. 922-925.
- E. Bostan, O. Vardoulis, D. Piccini, P.D. Tafti, N. Stergiopulos, M. Unser, "Spatio-Temporal Regularization of Flow-Fields," Proceedings of the Tenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'13), San Francisco CA, USA, April 7-11, 2013, pp. 824-827.
- H. Kirshner, C. Vonesch, M. Unser, "Can Localization Microscopy Benefit from Approximation Theory?," Proceedings of the Tenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'13), San Francisco CA, USA, April 7-11, 2013, pp. 584-587.
- J. Min, C. Vonesch, N. Olivier, H. Kirshner, S. Manley, J.C. Ye, M. Unser, "Continuous Localization Using Sparsity Constraints for High-Density Super-Resolution Microscopy," Best student paper award, Proceedings of the Tenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'13), San Francisco CA, USA, April 7-11, 2013, pp. 181-184.
- S. Lefkimmiatis, M. Unser, "3D Poisson Microscopy Deconvolution with Hessian Schatten-Norm Regularization," Proceedings of the Tenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'13), San Francisco CA, USA, April 7-11, 2013, pp. 165-168.

Conference Papers • 2012

- U.S. Kamilov, S. Rangan, A.K. Fletcher, M. Unser, "Approximate Message Passing with Consistent Parameter Estimation and Applications to Sparse Learning," Proceedings of the Twenty-Sixth Annual Conference on Neural Information Processing Systems (NIPS'12), Lake Tahoe NV, USA, December 3-6, 2012, pp. 2447-2455.
- S. Lefkimmiatis, M. Unser, "A Projected Gradient Algorithm for Image Restoration Under Hessian Matrix-Norm Regularization," Proceedings of the 2012 Nineteenth IEEE International Conference on Image Processing (ICIP'12), Orlando FL, USA, September 30-October 3, 2012, pp. 3029-3032.
- A. Amini, U.S. Kamilov, M. Unser, "The Analog Formulation of Sparsity Implies Infinite Divisibility and Rules Out Bernoulli-Gaussian Priors," Proceedings of the 2012 IEEE Information Theory Workshop (ITW'12), Lausanne VD, Swiss Confederation, September 3-7, 2012, pp. 687-691.
- S. Lefkimmiatis, A. Bourquard, M. Unser, "Hessian-Based Regularization for 3-D Microscopy Image Restoration," Proceedings of the Ninth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'12), Barcelona, Kingdom of Spain, May 2-5, 2012, pp. 1731-1734.
- E. Bostan, P.D. Tafti, M. Unser, "A Dual Algorithm for L
_{1}-Regularized Reconstruction of Vector Fields," Proceedings of the Ninth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'12), Barcelona, Kingdom of Spain, May 2-5, 2012, pp. 1579-1582. - H. Kirshner, T. Pengo, N. Olivier, D. Sage, S. Manley, M. Unser, "A PSF-Based Approach to Biplane Calibration in 3D Super-Resolution Microscopy," Proceedings of the Ninth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'12), Barcelona, Kingdom of Spain, May 2-5, 2012, pp. 1232-1235.
- E. Bostan, U. Kamilov, M. Unser, "Reconstruction of Biomedical Images and Sparse Stochastic Modeling," Proceedings of the Ninth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'12), Barcelona, Kingdom of Spain, May 2-5, 2012, pp. 880-883.
- R. Delgado-Gonzalo, N. Chenouard, M. Unser, "Fast Parametric Snakes for 3D Microscopy," Proceedings of the Ninth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'12), Barcelona, Kingdom of Spain, May 2-5, 2012, pp. 852-855.
- R. Madani, A. Bourquard, M. Unser, "Image Segmentation with Background Correction Using a Multiplicative Smoothing-Spline Model," Proceedings of the Ninth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'12), Barcelona, Kingdom of Spain, May 2-5, 2012, pp. 186-189.
- M. Nilchian, M. Unser, "Differential Phase-Contrast x-Ray Computed Tomography: From Model Discretization to Image Reconstruction," Proceedings of the Ninth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'12), Barcelona, Kingdom of Spain, May 2-5, 2012, pp. 90-93.
- U. Kamilov, A. Amini, M. Unser, "MMSE Denoising of Sparse Lévy Processes via Message Passing," Proceedings of the Thirty-Seventh IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'12), 京都市 (Kyoto), Japan, March 25-30, 2012, pp. 3637-3640.
- A. Amini, U. Kamilov, M. Unser, "Bayesian Denoising of Generalized Poisson Processes with Finite Rate of Innovation," Proceedings of the Thirty-Seventh IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'12), 京都市 (Kyoto), Japan, March 25-30, 2012, pp. 3629-3632.
- U. Kamilov, E. Bostan, M. Unser, "Generalized Total Variation Denoising via Augmented Lagrangian Cycle Spinning with Haar Wavelets," Proceedings of the Thirty-Seventh IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'12), 京都市 (Kyoto), Japan, March 25-30, 2012, pp. 909-912.
- A. Amini, M. Unser, "Stochastic Models and Techniques for Sparse Signals," Proceedings of the 2012 IEICE General Conference (IEICE'12), 岡山市 (Okayama), Japan, March 20-23, 2012, pp. SS-37–SS-39.

Conference Papers • 2011

- A. Bourquard, H. Kirshner, M. Unser, "Resolution-Invariant Separable ARMA Modeling of Images," Proceedings of the 2011 Eighteenth IEEE International Conference on Image Processing (ICIP'11), Brussels, Kingdom of Belgium, September 11-14, 2011, pp. 1873-1876.
- Z. Dogan, S. Lefkimmiatis, A. Bourquard, M. Unser, "A Second-Order Extension of TV Regularization for Image Deblurring," Proceedings of the 2011 Eighteenth IEEE International Conference on Image Processing (ICIP'11), Brussels, Kingdom of Belgium, September 11-14, 2011, pp. 713-716.
- M. Guerquin-Kern, J.-C. Baritaux, M. Unser, "Efficient Image Reconstruction Under Sparsity Constraints with Application to MRI and Bioluminescence Tomography," Proceedings of the Thirty-Sixth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'11), Prague, Czech Republic, May 22-27, 2011, pp. 5760-5763.
- N. Chenouard, M. Unser, "Learning Steerable Wavelet Frames," Proceedings of the Ninth International Workshop on Sampling Theory and Applications (SampTA'11), Singapore, Republic of Singapore, May 2-6, 2011.
- H. Kirshner, S. Maggio, M. Unser, "Maximum-Likelihood Identification of Sampled Gaussian Processes," Proceedings of the Ninth International Workshop on Sampling Theory and Applications (SampTA'11), Singapore, Republic of Singapore, May 2-6, 2011.
- N. Chenouard, M. Unser, "3D Steerable Wavelets and Monogenic Analysis for Bioimaging," Proceedings of the Eighth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'11), Chicago IL, USA, March 30-April 2, 2011, pp. 2132-2135.
- R. Delgado-Gonzalo, N. Chenouard, M. Unser, "A New Hybrid Bayesian-Variational Particle Filter with Application to Mitotic Cell Tracking," Proceedings of the Eighth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'11), Chicago IL, USA, March 30-April 2, 2011, pp. 1917-1920.
- P.D. Tafti, R. Delgado-Gonzalo, A.F. Stalder, M. Unser, "Variational Enhancement and Denoising of Flow Field Images," Best student paper award, Proceedings of the Eighth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'11), Chicago IL, USA, March 30-April 2, 2011, pp. 1061-1064.
- J.-C. Baritaux, M. Unser, "A Primal-Dual Reconstruction Algorithm for Fluorescence and Bioluminescence Tomography," Proceedings of the Eighth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'11), Chicago IL, USA, March 30-April 2, 2011, pp. 960-963.
- S. Maggio, M. Alessandrini, N. Speciale, O. Bernard, D. Vray, O. Basset, M. Unser, "Continuous-Domain ARMA Modeling for Ultrasound Tissue Characterization," Proceedings of the Eighth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'11), Chicago IL, USA, March 30-April 2, 2011, pp. 895-898.

Conference Papers • 2010

- F. Luisier, T. Blu, M. Unser, "Undecimated Haar Thresholding for Poisson Intensity Estimation," Proceedings of the 2010 Seventeenth IEEE International Conference on Image Processing (ICIP'10), Hong Kong, People's Republic of China, September 26-29, 2010, pp. 1697-1700.
- İ. Bayram, M. Guerquin-Kern, R. Terrés-Cristofani, M. Unser, "Accelerated Wavelet-Regularized Deconvolution for 3-D Fluorescence Microcopy," Proceedings of the 2010 Seventeenth IEEE International Conference on Image Processing (ICIP'10), Hong Kong, People's Republic of China, September 26-29, 2010, pp. 581-584.
- S. Maggio, H. Kirshner, M. Unser, "Continuous-Time AR Model Identification: Does Sampling Rate Really Matter?," Proceedings of the Eighteenth European Signal Processing Conference (EUSIPCO'10), Ålborg, Kingdom of Denmark, August 23-27, 2010, pp. 1469-1473.
- H. Kirshner, M. Porat, M. Unser, "A Stochastic Minimum-Norm Approach to Image and Texture Interpolation," Proceedings of the Eighteenth European Signal Processing Conference (EUSIPCO'10), Ålborg, Kingdom of Denmark, August 23-27, 2010, pp. 1004-1008.
- D. Jeanbourquin, D. Sage, L. Nguyen, B. Schaeli, S. Kayal, D.A. Barry, L. Rossi, "Flow Measurements in Sewer Systems Based on Image Analysis: Automatic Flow Velocity Algorithm," Proceedings of the Seventh International Conference on Sustainable Techniques and Strategies in Urban Water Management (NOVATECH'10), Lyon, French Republic, June 27-July 1, 2010, pp. 180-189.
- P.D. Tafti, M. Unser, "Fractional Brownian Models for Vector Field Data," Proceedings of the 2010 IEEE International Symposium on Information Theory (ISIT'10), Austin TX, USA, June 13-18, 2010, pp. 1738-1742.
- K.N. Chaudhury, Z. Püspöki, A. Muñoz Barrutia, D. Sage, M. Unser, "Fast Detection of Cells Using a Continuously Scalable Mexican-Hat-Like Template," Proceedings of the Seventh IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'10), Rotterdam, Kingdom of the Netherlands, April 14-17, 2010, pp. 1277-1280.
- J.-C. Baritaux, M. Unser, "
*A priori*Guided Reconstruction for FDOT Using Mixed Norms," Proceedings of the Seventh IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'10), Rotterdam, Kingdom of the Netherlands, April 14-17, 2010, pp. 692-695. - A. Entezari, M. Unser, "A Box Spline Calculus for Computed Tomography," Proceedings of the Seventh IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'10), Rotterdam, Kingdom of the Netherlands, April 14-17, 2010, pp. 600-603.
- R. Delgado-Gonzalo, N. Dénervaud, S. Maerkl, M. Unser, "Multi-Target Tracking of Packed Yeast Cells," Proceedings of the Seventh IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'10), Rotterdam, Kingdom of the Netherlands, April 14-17, 2010, pp. 544-547.
- M. Guerquin-Kern, F.I. Karahanoğlu, D. Van De Ville, K.P. Pruessmann, M. Unser, "Analytical Form of Shepp-Logan Phantom for Parallel MRI," Proceedings of the Seventh IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'10), Rotterdam, Kingdom of the Netherlands, April 14-17, 2010, pp. 261-264.
- P.D. Tafti, R. Delgado-Gonzalo, A.F. Stalder, M. Unser, "Fractal Modelling and Analysis of Flow-Field Images," Proceedings of the Seventh IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'10), Rotterdam, Kingdom of the Netherlands, April 14-17, 2010, pp. 49-52.
- N. Pavillon, C.S. Seelamantula, M. Unser, C. Depeursinge, "Artifact-Free Reconstruction from Off-Axis Digital Holograms Through Nonlinear Filtering," Proceedings of SPIE Photonics Europe 2010: Optics, Photonics and Digital Technologies for Multimedia Applications, Brussels, Kingdom of Belgium, April 12-15, 2010, vol. 7723, paper no. 77231U.

Conference Papers • 2009

- R. Delgado-Gonzalo, P.D. Tafti, M. Unser, "Fractional Laplacian Pyramids," Proceedings of the 2009 Sixteenth IEEE International Conference on Image Processing (ICIP'09), Cairo, Egypt, November 7-11, 2009, pp. 3809-3812.
- M. Unser, D. Van De Ville, "Higher-Order Riesz Transforms and Steerable Wavelet Frames," Proceedings of the 2009 Sixteenth IEEE International Conference on Image Processing (ICIP'09), Cairo, Egypt, November 7-11, 2009, pp. 3801-3804.
- G. González, F. Aguet, F. Fleuret, M. Unser, P. Fua, "Steerable Features for Statistical 3D Dendrite Detection," Proceedings of the Twelfth International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI'09), London, United Kingdom, September 20-24, 2009, [Lecture Notes in Computer Science, vol. 5762, part 2, Springer, 2009], pp. 625-632.
- N. Pavillon, C.S. Seelamantula, M. Unser, C. Depeursinge, "A Nonlinear Technique for Automatic Twin-Image and Zero-Order Term Suppression in Digital Holographic Microscopy," Proceedings of the Sixth International Workshop on Advanced Optical Metrology (FRINGE'09), Nürtingen, Federal Republic of Germany, September 13-16, 2009, pp. 160-163.
- M. Kalbermatten, D. Van De Ville, S. Joost, M. Unser, F. Golay, "Laplace-Gradient Wavelet Pyramid and Multiscale Tensor Structures Applied on High-Resolution DEMs," Proceedings of Geomorphometry 2009 (G'09), Zürich ZH, Swiss Confederation, August 31-September 2, 2009, pp. 124-132.
- P.D. Tafti, M. Unser, "Self-Similar Random Vector Fields and Their Wavelet Analysis," Proceedings of the SPIE Optics and Photonics 2009 Conference on Mathematical Methods: Wavelet XIII, San Diego CA, USA, August 2-6, 2009, vol. 7446, pp. 74460Y-1/74460Y-8.
- D. Van De Ville, M. Guerquin-Kern, M. Unser, "Pyramid-Based Texture Synthesis Using Local Orientation and Multidimensional Histogram Matching," Proceedings of the SPIE Optics and Photonics 2009 Conference on Mathematical Methods: Wavelet XIII, San Diego CA, USA, August 2-6, 2009, vol. 7446, pp. 74460X-1/74460X-8.
- D. Van De Ville, M. Unser, "Wavelet Primal Sketch Representation Using Marr Wavelet Pyramid and Its Reconstruction," Proceedings of the SPIE Optics and Photonics 2009 Conference on Mathematical Methods: Wavelet XIII, San Diego CA, USA, August 2-6, 2009, vol. 7446, pp. 74460W-1/74460W-8.
- K.N. Chaudhury, M. Unser, "Gabor Wavelet Analysis and the Fractional Hilbert Transform," Proceedings of the SPIE Optics and Photonics 2009 Conference on Mathematical Methods: Wavelet XIII, San Diego CA, USA, August 2-6, 2009, vol. 7446, pp. 74460T-1/74460T-7.
- F. Aguet, S. Geissbühler, I. Märki, T. Lasser, M. Unser, "Steerable Filters for Orientation Estimation and Localization of Fluorescent Dipoles," Proceedings of the Sixth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'09), Boston MA, USA, June 28-July 1, 2009, pp. 1166-1169.
- F. Luisier, C. Vonesch, T. Blu, M. Unser, "Fast Haar-Wavelet Denoising of Multidimensional Fluorescence Microscopy Data," Proceedings of the Sixth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'09), Boston MA, USA, June 28-July 1, 2009, pp. 310-313.
- C.S. Seelamantula, N. Pavillon, C. Depeursinge, M. Unser, "Zero-Order-Free Image Reconstruction in Digital Holographic Microscopy," Proceedings of the Sixth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'09), Boston MA, USA, June 28-July 1, 2009, pp. 201-204.
- M. Guerquin-Kern, D. Van De Ville, C. Vonesch, J.-C. Baritaux, K.P. Pruessmann, M. Unser, "Wavelet-Regularized Reconstruction for Rapid MRI," Proceedings of the Sixth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'09), Boston MA, USA, June 28-July 1, 2009, pp. 193-196.
- J.-C. Baritaux, M. Guerquin-Kern, M. Unser, "Integrated Modeling and Reconstruction with Sparsity Constraints for fDOT," Proceedings of the Sixth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'09), Boston MA, USA, June 28-July 1, 2009, pp. 173-176.
- N. Ducros, A. Da Silva, J.-M. Dinten, C.S. Seelamantula, M. Unser, F. Peyrin, "Time Resolved Fluorescence Diffuse Optical Tomography Using Multi-Resolution Exponential B-Splines," Proceedings of the Sixth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'09), Boston MA, USA, June 28-July 1, 2009, pp. 157-160.
- L. Nguyen, D. Sage, S. Kayal, D. Jeanbourquin, M. Scherz, D.A. Barry, M. Unser, L. Rossi, "Vision-Based System for the Control and Measurement of Wastewater Flow Rate in Sewer Systems," Proceedings of the Tenth IWA Conference on Instrumentation, Control and Automation (ICA'09), Cairns QLD, Commonwealth of Australia, June 14-17, 2009, paper no. OP03-4.
- S. Bergner, D. Van De Ville, T. Blu, T. Möller, "On Sampling Lattices with Similarity Scaling Relationships," Proceedings of the Eighth International Workshop on Sampling Theory and Applications (SampTA'09), Marseille, French Republic, May 18-22, 2009.
- C.S. Seelamantula, M. Unser, "A Method for Generalized Sampling and Reconstruction of Finite-Rate-of-Innovation Signals," Proceedings of the Eighth International Workshop on Sampling Theory and Applications (SampTA'09), Marseille, French Republic, May 18-22, 2009.
- K.N. Chaudhury, M. Unser, "The Fractional Hilbert Transform and Dual-Tree Gabor-Like Wavelet Analysis," Proceedings of the Thirty-Fourth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'09), Taipei, Taiwan (People's Republic of China), April 19-24, 2009, pp. 3205-3208.

Conference Papers • 2008

- D. Van De Ville, M. Unser, "The Marr Wavelet Pyramid," Proceedings of the 2008 Fifteenth IEEE International Conference on Image Processing (ICIP'08), San Diego CA, USA, October 12-15, 2008, pp. 2804-2807.
- P.D. Tafti, X. Wu, "Automatic Tonal Harmonization for Multi-Spectral Mosaics," Proceedings of the 2008 Fifteenth IEEE International Conference on Image Processing (ICIP'08), San Diego CA, USA, October 12-15, 2008, pp. 1876-1879.
- L. Condat, D. Van De Ville, "New Optimized Spline Functions for Interpolation on the Hexagonal Lattice," Proceedings of the 2008 Fifteenth IEEE International Conference on Image Processing (ICIP'08), San Diego CA, USA, October 12-15, 2008, pp. 1256-1259.
- L. Condat, D. Van De Ville, "Fully Reversible Image Rotation by 1-D Filtering," Proceedings of the 2008 Fifteenth IEEE International Conference on Image Processing (ICIP'08), San Diego CA, USA, October 12-15, 2008, pp. 913-916.
- K.N. Chaudhury, A. Muñoz Barrutia, M. Unser, "Fast Adaptive Elliptical Filtering Using Box Splines," Proceedings of the 2008 Fifteenth IEEE International Conference on Image Processing (ICIP'08), San Diego CA, USA, October 12-15, 2008, pp. 785-788.
- C. Vonesch, S. Ramani, M. Unser, "Recursive Risk Estimation for Non-Linear Image Deconvolution with a Wavelet-Domain Sparsity Constraint," Proceedings of the 2008 Fifteenth IEEE International Conference on Image Processing (ICIP'08), San Diego CA, USA, October 12-15, 2008, pp. 665-668.
- A. Bourquard, P. Thévenaz, K. Balać, M. Unser, "Consistent and Regularized Magnification of Images," Proceedings of the 2008 Fifteenth IEEE International Conference on Image Processing (ICIP'08), San Diego CA, USA, October 12-15, 2008, pp. 325-328.
- C.S. Seelamantula, F. Aguet, S. Romain, P. Thévenaz, M. Unser, "Parametric B-Spline Snakes on Distance Maps—Application to Segmentation of Histology Images," Proceedings of the Sixteenth European Signal Processing Conference (EUSIPCO'08), Lausanne VD, Swiss Confederation, August 25-29, 2008.
- M. Unser, K. Balać, D. Van De Ville, "The Monogenic Riesz-Laplace Wavelet Transform," Proceedings of the Sixteenth European Signal Processing Conference (EUSIPCO'08), Lausanne VD, Swiss Confederation, August 25-29, 2008.
- D. Van De Ville, D. Sage, K. Balać, M. Unser, "The Marr Wavelet Pyramid and Multiscale Directional Image Analysis," Proceedings of the Sixteenth European Signal Processing Conference (EUSIPCO'08), Lausanne VD, Swiss Confederation, August 25-29, 2008.
- E. Fonck, G.G. Feigl, J. Fasel, D. Sage, M. Unser, D.A. Rüfenacht, N. Stergiopulos, "Effect of Ageing on Elastin Functionality in Human Cerebral Arteries," Proceedings of the ASME 2008 Summer Bioengineering Conference (SBC'08), Marco Island FL, USA, June 25-29, 2008, pp. SBC2008-192727-1/2.
- P.D. Tafti, D. Van De Ville, M. Unser, "Innovation Modelling and Wavelet Analysis of Fractal Processes in Bio-Imaging," Proceedings of the Fifth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'08), Paris, French Republic, May 14-17, 2008, pp. 1501-1504.
- C. Vonesch, M. Unser, "A Fast Thresholded Landweber Algorithm for General Wavelet Bases: Application to 3D Deconvolution Microscopy," Proceedings of the Fifth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'08), Paris, French Republic, May 14-17, 2008, pp. 1351-1354.
- D. Kandaswamy, T. Blu, L. Spinelli, C. Michel, D. Van De Ville, "EEG Source Localization by Multi-Planar Analytic Sensing," Proceedings of the Fifth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'08), Paris, French Republic, May 14-17, 2008, pp. 1075-1078.
- S. Ramani, C. Vonesch, M. Unser, "Deconvolution of 3D Fluorescence Micrographs with Automatic Risk Minimization," Proceedings of the Fifth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'08), Paris, French Republic, May 14-17, 2008, pp. 732-735.
- S.C. Sekhar, R. Michaely, R.A. Leitgeb, M. Unser, "Theoretical Analysis of Complex-Conjugate-Ambiguity Suppression in Frequency-Domain Optical-Coherence Tomography," Proceedings of the Fifth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'08), Paris, French Republic, May 14-17, 2008, pp. 396-399.
- J.-C. Baritaux, S.C. Sekhar, M. Unser, "A Spline-Based Forward Model for Optical Diffuse Tomography," Proceedings of the Fifth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'08), Paris, French Republic, May 14-17, 2008, pp. 384-387.
- O. Bernard, D. Friboulet, P. Thévenaz, M. Unser, "Variational B-Spline Level-Set Method for Fast Image Segmentation," Proceedings of the Fifth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'08), Paris, French Republic, May 14-17, 2008, pp. 177-180.
- F. Aguet, D. Van De Ville, M. Unser, "An Accurate PSF Model with Few Parameters for Axially Shift-Variant Deconvolution," Proceedings of the Fifth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'08), Paris, French Republic, May 14-17, 2008, pp. 157-160.
- S. Delpretti, F. Luisier, S. Ramani, T. Blu, M. Unser, "Multiframe SURE-Let Denoising of Timelapse Fluorescence Microscopy Images," Proceedings of the Fifth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'08), Paris, French Republic, May 14-17, 2008, pp. 149-152.
- K.N. Chaudhury, M. Unser, "Construction of Hilbert Transform Pairs of Wavelet Bases and Optimal Time-Frequency Localization," Proceedings of the Thirty-Third IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'08), Las Vegas NV, USA, March 30-April 4, 2008, pp. 3277-3280.
- S. Ramani, T. Blu, M. Unser, "Blind Optimization of Algorithm Parameters for Signal Denoising by Monte-Carlo SURE," Proceedings of the Thirty-Third IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'08), Las Vegas NV, USA, March 30-April 4, 2008, pp. 905-908.
- F. Luisier, T. Blu, "SURE-Let Multichannel Image Denoising: Undecimated Wavelet Thresholding," Proceedings of the Thirty-Third IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'08), Las Vegas NV, USA, March 30-April 4, 2008, pp. 769-772.
- S.C. Sekhar, M. Unser, "Performance Analysis of the Cepstral Technique for Frequency-Domain Optical-Coherence Tomography," Proceedings of the Thirty-Third IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'08), Las Vegas NV, USA, March 30-April 4, 2008, pp. 557-560.
- P. Thévenaz, T. Blu, M. Unser, "Short Basis Functions for Constant-Variance Interpolation," Proceedings of the SPIE International Symposium on Medical Imaging: Image Processing (MI'08), San Diego CA, USA, February 16-21, 2008, vol. 6914, pp. 69142L-1-69142L-8.

Conference Papers • 2007

- B. Naegel, N. Passat, N. Boch, M. Kocher, "Segmentation Using Vector-Attribute Filters: Methodology and Application to Dermatological Imaging," Proceedings of the Eighth International Symposium on Mathematical Morphology (ISMM'07), Río de Janeiro, Brazil, October 10-13, 2007, pp. 239-250.
- L. Condat, B. Forster-Heinlein, D. Van De Ville, "H
_{2}O: Reversible Hexagonal-Orthogonal Grid Conversion by 1-D Filtering," Proceedings of the 2007 Fourteenth IEEE International Conference on Image Processing (ICIP'07), San Antonio TX, USA, September 16-19, 2007, pp. II-73-II-76. - D. Kandaswamy, T. Blu, D. Van De Ville, "Analytic Sensing: Direct Recovery of Point Sources from Planar Cauchy Boundary Measurements," Proceedings of the SPIE Optics and Photonics 2007 Conference on Mathematical Methods: Wavelet XII, San Diego CA, USA, August 26-29, 2007, vol. 6701, pp. 67011Y-1/67011Y-6.
- F. Luisier, T. Blu, "SURE-LET Interscale-Intercolor Wavelet Thresholding for Color Image Denoising," Proceedings of the SPIE Optics and Photonics 2007 Conference on Mathematical Methods: Wavelet XII, San Diego CA, USA, August 26-29, 2007, vol. 6701, pp. 67011H-1/67011H-10.
- I. Khalidov, D. Van De Ville, J. Fadili, M. Unser, "Activelets and Sparsity: A New Way to Detect Brain Activation from fMRI Data," Proceedings of the SPIE Optics and Photonics 2007 Conference on Mathematical Methods: Wavelet XII, San Diego CA, USA, August 26-29, 2007, vol. 6701, pp. 67010Y-1/67010Y-8.
- I. Khalidov, D. Van De Ville, T. Blu, M. Unser, "Construction of Wavelet Bases That Mimic the Behaviour of Some Given Operator," Proceedings of the SPIE Optics and Photonics 2007 Conference on Mathematical Methods: Wavelet XII, San Diego CA, USA, August 26-29, 2007, vol. 6701, pp. 67010S-1/67010S-7.
- C. Vonesch, M. Unser, "A Fast Iterative Thresholding Algorithm for Wavelet-Regularized Deconvolution," Proceedings of the SPIE Optics and Photonics 2007 Conference on Mathematical Methods: Wavelet XII, San Diego CA, USA, August 26-29, 2007, vol. 6701, pp. 67010D-1/67010D-5.
- L. Condat, B. Forster-Heinlein, D. Van De Ville, "A New Family of Rotation-Covariant Wavelets on the Hexagonal Lattice," Proceedings of the SPIE Optics and Photonics 2007 Conference on Mathematical Methods: Wavelet XII, San Diego CA, USA, August 26-29, 2007, vol. 6701, pp. 67010B-1/67010B-9.
- J. Verhaeghe, D. Van De Ville, I. Khalidov, M. Unser, Y. D'Asseler, I. Lemahieu, "Reconstruction of Dynamic PET Data Using Spatio-Temporal Wavelet ℓ
_{1}Regularization," Proceedings of the Twenty-Ninth Annual International Conference of the IEEE Engineering in Medicine and Biology Society, in conjunction with the biennial Conference of the French Society of Biological and Medical Engineering (EMBC'07), Lyon, French Republic, August 23-26, 2007, pp. 6539-6542. - A. Depeursinge, D. Sage, A. Hidki, A. Platon, P.-A. Poletti, M. Unser, H. Müller, "Lung Tissue Classification Using Wavelet Frames," Proceedings of the Twenty-Ninth Annual International Conference of the IEEE Engineering in Medicine and Biology Society, in conjunction with the biennial Conference of the French Society of Biological and Medical Engineering (EMBC'07), Lyon, French Republic, August 23-26, 2007, pp. 6259-6262.
- F. Meyenhofer, O. Schaad, P. Descombes, M. Kocher, "Automatic Analysis of microRNA Microarray Images Using Mathematical Morphology," Proceedings of the Twenty-Ninth Annual International Conference of the IEEE Engineering in Medicine and Biology Society, in conjunction with the biennial Conference of the French Society of Biological and Medical Engineering (EMBC'07), Lyon, French Republic, August 23-26, 2007, pp. 6235-6238.
- M. Kocher, J.-L. Daire, P. Thévenaz, T. Schindler, P.-F. Keller, D. Didier, J.-P. Vallée, "Myocardial Perfusion Assessment by Use of System Identification Method in a One-Compartment Model," Proceedings of the Twenty-Ninth Annual International Conference of the IEEE Engineering in Medicine and Biology Society, in conjunction with the Biennial Conference of the French Society of Biological and Medical Engineering (EMBC'07), Lyon, French Republic, August 23-26, 2007, pp. 4492-4495.
- C.S. Sekhar, R.A. Leitgeb, A.H. Bachmann, M.A. Unser, "Logarithmic Transformation Technique for Exact Signal Recovery in Frequency-Domain Optical-Coherence Tomography," Proceedings of the SPIE European Conference on Biomedical Optics: Progress in Biomedical Optics and Imaging (ECBO'07), Münich, Federal Republic of Germany, June 17-21, 2007, vol. 6627, pp. 662714-1-662714-6.
- F. Luisier, T. Blu, "Image Denoising by Pointwise Thresholding of the Undecimated Wavelet Coefficients: A Global SURE Optimum," Proceedings of the Thirty-Second IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'07), Honolulu HI, USA, April 15-20, 2007, pp. I-593-I-596.
- S.C. Sekhar, H. Nazkani, T. Blu, M. Unser, "A New Technique for High-Resolution Frequency Domain Optical Coherence Tomography," Proceedings of the Thirty-Second IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'07), Honolulu HI, USA, April 15-20, 2007, pp. I-425-I-428.
- F. Aguet, D. Van De Ville, M. Unser, "Sub-Resolution Maximum-Likelihood Based Localization of Fluorescent Nanoparticles in Three Dimensions," Proceedings of the Fourth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'07), Arlington VA, USA, April 12-15, 2007, pp. 932-935.
- S.C. Sekhar, R.A. Leitgeb, M.L. Villiger, A.H. Bachmann, T. Blu, M. Unser, "Non-Iterative Exact Signal Recovery in Frequency Domain Optical Coherence Tomography," Proceedings of the Fourth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'07), Arlington VA, USA, April 12-15, 2007, pp. 808-811.
- S. Ramani, P. Thévenaz, M. Unser, "Regularized Interpolation for Noisy Data," Proceedings of the Fourth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'07), Arlington VA, USA, April 12-15, 2007, pp. 612-615.
- C. Vonesch, M. Unser, "Fast Wavelet-Regularized Image Deconvolution," Proceedings of the Fourth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'07), Arlington VA, USA, April 12-15, 2007, pp. 608-611.
- D. Van De Ville, B. Bathellier, A. Carleton, T. Blu, M. Unser, "Wavelet-Based Statistical Analysis for Optical Imaging in Mouse Olfactory Bulb," Proceedings of the Fourth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'07), Arlington VA, USA, April 12-15, 2007, pp. 448-451.
- T.G. Thomas, C.S. Seelamantula, "Perception Studies on the Attributes of Synthetic Clear Speech for the Hard of Hearing," Proceedings of the International Symposium on Signal Processing and its Applications / International Conference on Information Sciences, Signal Processing and its Applications (ISSPA'07), Sharjah, United Arab Emirates, February 12-15, 2007, paper no. MC-P4.

Conference Papers • 2006

- G. Vidal-Cassanya, A. Muñoz Barrutia, M. Unser, "Locally Adaptive Smoothing Method Based on B-Splines," Proceedings of the 2006 Symposium on Computational Modelling of Objects Represented in Images—Fundamentals, Methods and Applications (CompIMAGE'06), Coimbra, Portuguese Republic, October 20-21, 2006.
- P. Thévenaz, M. Unser, "The Snakuscule," Proceedings of the 2006 Thirteenth IEEE International Conference on Image Processing (ICIP'06), Atlanta GA, USA, October 8-11, 2006, pp. 1633-1636.
- F. Luisier, T. Blu, M. Unser, "SURE-Based Wavelet Thresholding Integrating Inter-Scale Dependencies," Proceedings of the 2006 Thirteenth IEEE International Conference on Image Processing (ICIP'06), Atlanta GA, USA, October 8-11, 2006, pp. 1457-1460.
- L. Condat, D. Van De Ville, M. Unser, "Efficient Reconstruction of Hexagonally Sampled Data Using Three-Directional Box-Splines," Proceedings of the 2006 Thirteenth IEEE International Conference on Image Processing (ICIP'06), Atlanta GA, USA, October 8-11, 2006, pp. 697-700.
- S.C. Sekhar, S. Pilli, L. C, T.V. Sreenivas, "Novel Auditory Motivated Subband Temporal Envelope Based Fundamental Frequency Estimation Algorithm," Proceedings of the Fourteenth European Signal Processing Conference (EUSIPCO'06), Firenze, Italian Republic, September 4-8, 2006.
- G. Zheng, X. Zhang, S. Jonić, P. Thévenaz, M. Unser, L.-P. Nolte, "Point Similarity Measures Based on MRF Modeling of Difference Images for Spline-Based 2D-3D Rigid Registration of x-Ray Fluoroscopy to CT Images," Proceedings of the Third International Workshop on Biomedical Image Registration (WBIR'06), Utrecht, Kingdom of the Netherlands, July 9-11, 2006, [Biomedical Image Registration, Lecture Notes in Computer Science, vol. 4057, J.P.W. Pluim, B. Likar, F.A. Gerritsen, Eds., Springer, 2006], pp. 186-194.
- C.O.S. Sorzano, P. Thévenaz, I. Valdés, A. Beloso, M. Unser, "Elastic Image Registration with Applications to Proteomics," Proceedings of the Fifth International Workshop on Information Optics (WIO'06), Toledo, Kingdom of Spain, June 5-7, 2006, pp. 300-309.
- D. Van De Ville, B. Bathellier, R. Accolla, A. Carleton, T. Blu, M. Unser, "Wavelet-Based Detection of Stimulus Responses in Time-Lapse Microscopy," Proceedings of the Thirty-First IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'06), Toulouse, French Republic, May 14-19, 2006, pp. V-1161-V-1164.
- D. Van De Ville, T. Blu, M. Unser, "WSPM or How to Obtain Statistical Parametric Maps Using Shift-Invariant Wavelet Processing," Proceedings of the IEEE Thirty-First International Conference on Acoustics, Speech, and Signal Processing (ICASSP'06), Toulouse, French Republic, May 14-19, 2006, pp. V-1101-V-1104.
- T. Blu, M. Unser, "Optimal Interpolation of Fractional Brownian Motion Given Its Noisy Samples," Proceedings of the Thirty-First IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'06), Toulouse, French Republic, May 14-19, 2006, pp. III-860-III-863.
- S. Ramani, D. Van De Ville, M. Unser, "Non-Ideal Sampling and Adapted Reconstruction Using the Stochastic Matérn Model," Best student paper award, Proceedings of the IEEE Thirty-First International Conference on Acoustics, Speech, and Signal Processing (ICASSP'06), Toulouse, French Republic, May 14-19, 2006, pp. II-73-II-76.
- F. Aguet, D. Van De Ville, M. Unser, "Joint Texture and Topography Estimation for Extended Depth of Field in Brightfield Microscopy," Proceedings of the Third IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'06), Arlington VA, USA, April 6-9, 2006, pp. 778-781.
- M. Arigovindan, M. Sühling, C. Jansen, P. Hunziker, M. Unser, "Full Flow/Motion-Field Recovery from Pulsed-Wave Ultrasound Doppler Data," Proceedings of the Third IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'06), Arlington VA, USA, April 6-9, 2006, pp. 213-216.
- I. Khalidov, D. Van De Ville, M. Jacob, F. Lazeyras, M. Unser, "Improved MRSI with Field Inhomogeneity Compensation," Proceedings of the SPIE International Symposium on Medical Imaging: Image Processing (MI'06), San Diego CA, USA, February 11-16, 2006, vol. 6144, pp. 614467-1-614467-7.
- P. Thévenaz, D. Lambiel, M. Unser, "A Strategy Based on Maximum Spanning Trees to Stitch Together Microscope Images," Proceedings of the SPIE International Symposium on Medical Imaging: Image Processing (MI'06), San Diego CA, USA, February 11-16, 2006, vol. 6144, pp. 61442A-1-61442A-6.

Conference Papers • 2005

- M. Liebling, M. Unser, "Comparing Algorithms for Reconstructing Digital Off-Axis Fresnel Holograms," Proceedings of the SPIE Conference on Three-Dimensional TV, Video, and Display IV, Boston MA, USA, October 24-26, 2005, vol. 6016, pp. 213-222.
- L. Condat, D. Van De Ville, T. Blu, "Hexagonal
*versus*Orthogonal Lattices: A New Comparison Using Approximation Theory," Proceedings of the 2005 Twelfth IEEE International Conference on Image Processing (ICIP'05), Genova, Italian Republic, September 11-14, 2005, pp. III-1116-III-1119. - F. Aguet, M. Jacob, M. Unser, "Three-Dimensional Feature Detection Using Optimal Steerable Filters," Proceedings of the 2005 Twelfth IEEE International Conference on Image Processing (ICIP'05), Genova, Italian Republic, September 11-14, 2005, pp. II-1158-II-1161.
- S. Ramani, D. Van De Ville, M. Unser, "Sampling in Practice: Is the Best Reconstruction Space Bandlimited?," Proceedings of the 2005 Twelfth IEEE International Conference on Image Processing (ICIP'05), Genova, Italian Republic, September 11-14, 2005, pp. II-153-II-156.
- L. Condat, T. Blu, M. Unser, "Beyond Interpolation: Optimal Reconstruction by Quasi-Interpolation," Best student paper award, Proceedings of the 2005 Twelfth IEEE International Conference on Image Processing (ICIP'05), Genova, Italian Republic, September 11-14, 2005, pp. I-33-I-36.
- 平林 晃 (A. Hirabayashi), D. Sage, M. Unser, "IP-LAB: A Tool to Teach Image Processing Programming in Java—Challenge in Swiss Federal Institute of Technology Lausanne," Proceedings of the Fifty-Third Annual Japanese Society for Engineering Education Conference (JSEE'05), 広島市 (Hiroshima), Japan, September 9-11, 2005, pp. 473-474.
- Y. Hao, P. Marziliano, M. Vetterli, T. Blu, "Compression of ECG as a Signal with Finite Rate of Innovation," Proceedings of the Twenty-Seventh Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBS'05), Shanghai, People's Republic of China, September 1-4, 2005, pp. 7564-7567.
- C. Vonesch, T. Blu, M. Unser, "Generalized Biorthogonal Daubechies Wavelets," Proceedings of the SPIE Optics and Photonics 2005 Conference on Mathematical Methods: Wavelet XI, San Diego CA, USA, July 31-August 3, 2005, vol. 5914, pp. 59141X-1/59141X-6.
- I. Khalidov, T. Blu, M. Unser, "Generalized L-Spline Wavelet Bases," Proceedings of the SPIE Optics and Photonics 2005 Conference on Mathematical Methods: Wavelet XI, San Diego CA, USA, July 31-August 3, 2005, vol. 5914, pp. 59140F-1/59140F-8.
- F. Luisier, T. Blu, B. Forster, M. Unser, "Which Wavelet Bases Are the Best for Image Denoising?," Proceedings of the SPIE Optics and Photonics 2005 Conference on Mathematical Methods: Wavelet XI, San Diego CA, USA, July 31-August 3, 2005, vol. 5914, pp. 59140E-1/59140E-12.
- D. Van De Ville, T. Blu, B. Forster, M. Unser, "Semi-Orthogonal Wavelets That Behave like Fractional Differentiators," Proceedings of the SPIE Optics and Photonics 2005 Conference on Mathematical Methods: Wavelet XI, San Diego CA, USA, July 31-August 3, 2005, vol. 5914, pp. 59140C-1/59140C-8.
- 平林 晃 (A. Hirabayashi), M. Unser, "An Extension of Oblique Projection Sampling Theorem," Proceedings of the Sixth International Workshop on Sampling Theory and Applications (SampTA'05), Samsun, Turkey, July 10-15, 2005, pp. 1-6.
- F. Aguet, D. Van De Ville, M. Unser, "Sub-Resolution Axial Localization of Nanoparticles in Fluorescence Microscopy," Proceedings of the SPIE European Conference on Biomedical Optics (ECBO'05), Münich, Federal Republic of Germany, June 12-16, 2005, vol. 5860, pp. 103-106.
- I. Khalidov, M. Unser, "Exponential-Spline Wavelet Bases," Proceedings of the Thirtieth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'05), Philadelphia PA, USA, March 18-23, 2005, pp. IV-625-IV-628.
- C. Vonesch, T. Blu, M. Unser, "Generalized Daubechies Wavelets," Proceedings of the Thirtieth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'05), Philadelphia PA, USA, March 18-23, 2005, pp. IV-593-IV-596.
- M. Liebling, T.-F. Bernhard, A.H. Bachmann, L. Froehly, T. Lasser, M. Unser, "Continuous Wavelet Transform Ridge Extraction for Spectral Interferometry Imaging," Proceedings of the SPIE Conference on Coherence Domain Optical Methods and Optical Coherence Tomography in Biomedicine IX, San José CA, USA, January 23-26, 2005, vol. 5690, pp. 397-402.

Conference Papers • 2004

- M. Jacob, T. Blu, M. Unser, "Shape Estimation of 3-D DNA Molecules from Stereo Cryo-Electron Micro-Graphs," Proceedings of the 2004 Eleventh IEEE International Conference on Image Processing (ICIP'04), Singapore, Singapore, October 24-27, 2004, pp. 1883-1886.
- D. Van De Ville, T. Blu, B. Forster, M. Unser, "Isotropic-Polyharmonic B-Splines and Wavelets," Proceedings of the 2004 Eleventh IEEE International Conference on Image Processing (ICIP'04), Singapore, Singapore, October 24-27, 2004, pp. 661-664.
- C.O.S. Sorzano, M. Blagov, P. Thévenaz, E. Myasnikova, M. Samsonova, M. Unser, "Algorithm for Spline-Based Elastic Registration in Application to Confocal Images of Gene Expression," Proceedings of the Seventh International Conference on Pattern Recognition and Image Analysis: New Information Technologies (PRIA-7'04), St. Petersburg, Russian Federation, October 18-23, 2004, vol. 3, pp. 928-931.
- T. Blu, P. Thévenaz, M. Unser, "High-Quality Causal Interpolation for Online Unidimensional Signal Processing," Proceedings of the Twelfth European Signal Processing Conference (EUSIPCO'04), Wien, Republic of Austria, September 6-10, 2004, pp. 1417-1420.
- M. Unser, "Fractional Splines, Wavelet Bases, and Applications," Plenary talk, Proceedings of the First IFAC Workshop on Fractional Differentiation and Its Applications (FDA'04), Bordeaux, French Republic, July 19-21, 2004, vol. 2004-1, pp. 31-35.
- T. Blu, M. Unser, "Quantitative
**L**^{2}Approximation Error of a Probability Density Estimate Given by It Samples," Proceedings of the Twenty-Ninth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'04), Montréal QC, Canada, May 17-21, 2004, pp. III-952-III-955. - S. Tirosh, D. Van De Ville, M. Unser, "Polyharmonic Smoothing Splines for Multi-Dimensional Signals with 1 ⁄ ||ω||
^{τ}-Like Spectra," Proceedings of the Twenty-Ninth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'04), Montréal QC, Canada, May 17-21, 2004, pp. III-297-III-300. - N. Subotić, D. Van De Ville, M. Unser, "On the Feasibility of Axial Tracking of a Fluorescent Nano-Particle Using a Defocusing Model," Proceedings of the Second IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'04), Arlington VA, USA, April 15-18, 2004, pp. 1231-1234.
- E. Meijering, M. Jacob, J.-C.F. Sarria, P. Steiner, H. Hirling, M. Unser, "Neurite Tracing in Fluorescence Microscopy Images Using Ridge Filtering and Graph Searching: Principles and Validation," Proceedings of the Second IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'04), Arlington VA, USA, April 15-18, 2004, pp. 1219-1222.
- D. Van De Ville, T. Blu, M. Unser, "Wavelet-Based fMRI Statistical Analysis and Spatial Interpretation: A Unifying Approach," Proceedings of the Second IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'04), Arlington VA, USA, April 15-18, 2004, pp. 1167-1170.
- B. Forster, D. Van De Ville, J. Berent, D. Sage, M. Unser, "Extended Depth-of-Focus for Multi-Channel Microscopy Images: A Complex Wavelet Approach," Proceedings of the Second IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'04), Arlington VA, USA, April 15-18, 2004, pp. 660-663.
- M. Sühling, M. Arigovindan, C. Jansen, P. Hunziker, M. Unser, "Bimodal Myocardial Motion Analysis from B-Mode and Tissue Doppler Ultrasound," Proceedings of the Second IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'04), Arlington VA, USA, April 15-18, 2004, pp. 308-311.

Conference Papers • 2003

- D. Sage, F. Hediger, S.M. Gasser, M. Unser, "Automatic Tracking of Particles in Dynamic Fluorescence Microscopy," Proceedings of the Third International Symposium on Image and Signal Processing and Analysis (ISPA'03), Rome, Italian Republic, September 18-20, 2003, pp. I.582-I.586.
- M. Jacob, M. Unser, "Optimal Steerable Filters for Feature Detection," Proceedings of the 2003 Tenth IEEE International Conference on Image Processing (ICIP'03), Barcelona, Kingdom of Spain, September 14-17, 2003, pp. III.433-III.436.
- F. Precioso, M. Barlaud, T. Blu, M. Unser, "Smoothing B-Spline Active Contour for Fast and Robust Image and Video Segmentation," Proceedings of the 2003 Tenth IEEE International Conference on Image Processing (ICIP'03), Barcelona, Kingdom of Spain, September 14-17, 2003, pp. I.137-I.140.
- M. Unser, "Splines and Wavelets: New Perspectives for Pattern Recognition," Plenary talk, Proceedings of the Twenty-Fifth Pattern Recognition Symposium (DAGM'03), Magdeburg (Sachsen-Anhalt), Federal Republic of Germany, September 10-12, 2003, [Pattern Recognition, Lecture Notes in Computer Science, vol. 2781, B. Michaelis, G. Krell, Eds., Springer, 2003], pp. 244-248.
- E. Meijering, M. Jacob, J.-C.F. Sarria, M. Unser, "A Novel Approach to Neurite Tracing in Fluorescence Microscopy Images," Proceedings of the Fifth IASTED International Conference on Signal and Image Processing (SIP'03), Honolulu HI, USA, August 13-15, 2003, M.H. Hamza Ed., ACTA Press, Calgary, pp. 491-495.
- M. Liebling, T. Blu, M. Unser, "Non-Linear Fresnelet Approximation for Interference Term Suppression in Digital Holography," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing X, San Diego CA, USA, August 4-8, 2003, vol. 5207, part II, pp. 553-559.
- B. Forster, T. Blu, M. Unser, "A New Family of Complex Rotation-Covariant Multiresolution Bases in 2D," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing X, San Diego CA, USA, August 4-8, 2003, vol. 5207, part I, pp. 475-479.
- D. Van De Ville, T. Blu, M. Unser, "Wavelets
*versus*Resels in the Context of fMRI: Establishing the Link with SPM," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing X, San Diego CA, USA, August 4-8, 2003, vol. 5207, part I, pp. 417-425. - 市毛弘一 (K. Ichige), T. Blu, M. Unser, "Multiwavelet-Like Bases for High Quality Image Interpolation," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing X, San Diego CA, USA, August 4-8, 2003, vol. 5207, part I, pp. 153-161.
- M. Unser, T. Blu, "Fractional Wavelets, Derivatives, and Besov Spaces," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing X, San Diego CA, USA, August 4-8, 2003, vol. 5207, part I, pp. 147-152.
- T. Blu, M. Unser, "Harmonic Spline Series Representation of Scaling Functions," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing X, San Diego CA, USA, August 4-8, 2003, vol. 5207, part I, pp. 120-124.
- M. Liebling, T. Blu, , P. Marquet, C.D. Depeursinge, M. Unser, "Local Amplitude and Phase Retrieval Method for Digital Holography Applied to Microscopy," Proceedings of the SPIE European Conference on Biomedical Optics: Novel Optical Instrumentation for Biomedical Applications (ECBO'03), Münich, Federal Republic of Germany, June 22-25, 2003, vol. 5143, pp. 210-214.
- D. Van De Ville, T. Blu, M. Unser, "On the Approximation Power of Splines: Orthogonal
*versus*Hexagonal Lattices," Proceedings of the Fifth International Workshop on Sampling Theory and Applications (SampTA'03), Strobl, Republic of Austria, May 26-30, 2003, pp. 109-111. - M. Unser, P. Thévenaz, "Stochastic Sampling for Computing the Mutual Information of Two Images," Proceedings of the Fifth International Workshop on Sampling Theory and Applications (SampTA'03), Strobl, Republic of Austria, May 26-30, 2003, pp. 102-109.
- R. van Spaendonck, T. Blu, R. Baraniuk, M. Vetterli, "Orthogonal Hilbert Transform Filter Banks and Wavelets," Proceedings of the Twenty-Eighth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'03), Hong Kong SAR, People's Republic of China, April 6-10, 2003, vol. VI, pp. 505-508.
- T. Blu, M. Unser, "A Complete Family of Scaling Functions: The (α, τ)-Fractional Splines," Proceedings of the Twenty-Eighth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'03), Hong Kong SAR, People's Republic of China, April 6-10, 2003, vol. VI, pp. 421-424.
- 市毛弘一 (K. Ichige), T. Blu, M. Unser, "Interpolation of Signals by Generalized Piecewise-Linear Multiple Generators," Proceedings of the Twenty-Eighth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'03), Hong Kong SAR, People's Republic of China, April 6-10, 2003, vol. VI, pp. 261-264.
- D. Van De Ville, T. Blu, M. Unser, "Recursive Filtering for Splines on Hexagonal Lattices," Proceedings of the Twenty-Eighth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'03), Hong Kong SAR, People's Republic of China, April 6-10, 2003, vol. III, pp. 301-304.
- S. Jonić, P. Thévenaz, M. Unser, "Multiresolution-Based Registration of a Volume to a Set of Its Projections," Best poster award, Proceedings of the SPIE International Symposium on Medical Imaging: Image Processing (MI'03), San Diego CA, USA, February 17-20, 2003, vol. 5032, part II, pp. 1049-1052.
- C.H.P. Jansen, M. Arigovindan, M. Sühling, S. Marsch, M. Unser, P. Hunziker, "Multidimensional, Multistage Wavelet Footprints: A New Tool for Image Segmentation and Feature Extraction in Medical Ultrasound," Proceedings of the SPIE International Symposium on Medical Imaging: Image Processing (MI'03), San Diego CA, USA, February 17-20, 2003, vol. 5032, part II, pp. 762-767.
- M. Sühling, M. Arigovindan, C. Jansen, P. Hunziker, M. Unser, "Myocardial Motion Analysis and Visualization from Echocardiograms," Proceedings of the SPIE International Symposium on Medical Imaging: Image Processing (MI'03), San Diego CA, USA, February 17-20, 2003, vol. 5032, part I, pp. 306-313.

Conference Papers • 2002

- D. Van De Ville, R. Van de Walle, W. Philips, I. Lemahieu, "Image Resampling Between Orthogonal and Hexagonal Lattices," Proceedings of the 2002 Ninth IEEE International Conference on Image Processing (ICIP'02), Rochester NY, USA, September 22-25, 2002, pp. III.389-III.392.
- M. Arigovindan, M. Sühling, P. Hunziker, M. Unser, "Multigrid Image Reconstruction from Arbitrarily Spaced Samples," Proceedings of the 2002 Ninth IEEE International Conference on Image Processing (ICIP'02), Rochester NY, USA, September 22-25, 2002, pp. III.381-III.384.
- T. Blu, P. Thévenaz, M. Unser, "How a Simple Shift Can Significantly Improve the Performance of Linear Interpolation," Proceedings of the 2002 Ninth IEEE International Conference on Image Processing (ICIP'02), Rochester NY, USA, September 22-25, 2002, pp. III.377-III.380.
- M. Sühling, M. Arigovindan, P. Hunziker, M. Unser, "Multiresolution Moment Filters," Proceedings of the 2002 Ninth IEEE International Conference on Image Processing (ICIP'02), Rochester NY, USA, September 22-25, 2002, pp. I.393-I.396.
- T. Blu, H. Bay, M. Unser, "A New High-Resolution Processing Method for the Deconvolution of Optical Coherence Tomography Signals," Proceedings of the First IEEE International Symposium on Biomedical Imaging: Macro to Nano (ISBI'02), Washington DC, USA, July 7-10, 2002, vol. III, pp. 777-780.
- M. Liebling, T. Blu, É. Cuche, P. Marquet, C. Depeursinge, M. Unser, "A Novel Non-Diffractive Reconstruction Method for Digital Holographic Microscopy," Proceedings of the First IEEE International Symposium on Biomedical Imaging: Macro to Nano (ISBI'02), Washington DC, USA, July 7-10, 2002, vol. II, pp. 625-628.
- M. Jacob, T. Blu, M. Unser, "3-D Reconstruction of DNA Filaments from Stereo Cryo-Electron Micrographs," Proceedings of the First IEEE International Symposium on Biomedical Imaging: Macro to Nano (ISBI'02), Washington DC, USA, July 7-10, 2002, vol. II, pp. 597-600.
- M.J. Ledesma-Carbayo, J. Kybic, M. Sühling, P. Hunziker, M. Desco, A. Santos, M. Unser, "Cardiac Ultrasound Motion Detection by Elastic Registration Exploiting Temporal Coherence," Proceedings of the First IEEE International Symposium on Biomedical Imaging: Macro to Nano (ISBI'02), Washington DC, USA, July 7-10, 2002, vol. II, pp. 585-588.
- M. Sühling, M. Arigovindan, P. Hunziker, M. Unser, "Motion Analysis of Echocardiograms Using a Local-Affine, Spatio-Temporal Model," Proceedings of the First IEEE International Symposium on Biomedical Imaging: Macro to Nano (ISBI'02), Washington DC, USA, July 7-10, 2002, vol. II, pp. 573-576.
- S. Horbelt, M. Liebling, M. Unser, "Filter Design for Filtered Back-Projection Guided by the Interpolation Model," Best poster award, Proceedings of the SPIE International Symposium on Medical Imaging: Image Processing (MI'02), San Diego CA, USA, February 24-28, 2002, vol. 4684, part II, pp. 806-813.
- M. Unser, "Splines: A Perfect Fit for Medical Imaging," Plenary talk, Proceedings of the SPIE International Symposium on Medical Imaging: Image Processing (MI'02), San Diego CA, USA, February 24-28, 2002, vol. 4684, part I, pp. 225-236.

Conference Papers • 2001

- M.J. Ledesma-Carbayo, J. Kybic, M. Desco, A. Santos, M. Unser, "Cardiac Motion Analysis from Ultrasound Sequences Using Non-Rigid Registration," Proceedings of the Fourth International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI'01), Utrecht, Kingdom of the Netherlands, October 14-17, 2001, [Lecture Notes in Computer Science, vol. 2208, W.J. Niessen, M.A. Viergever, Eds., Springer, 2001], pp. 889-896.
- D. Sage, M. Unser, "Easy Java Programming for Teaching Image Processing," Proceedings of the 2001 Eighth IEEE International Conference on Image Processing (ICIP'01), Θεσσαλονίκη (Thessaloniki), Ελληνική Δημοκρατία (Hellenic Republic), October 7-10, 2001, vol. III, pp. 298-301.
- P. Thévenaz, M. Unser, "High-Quality Isosurface Rendering with Exact Gradient," Proceedings of the 2001 Eighth IEEE International Conference on Image Processing (ICIP'01), Θεσσαλονίκη (Thessaloniki), Ελληνική Δημοκρατία (Hellenic Republic), October 7-10, 2001, vol. I, pp. 854-857.
- M. Feilner, M. Jacob, M. Unser, "Orthogonal Quincunx Wavelets with Fractional Orders," Proceedings of the 2001 Eighth IEEE International Conference on Image Processing (ICIP'01), Θεσσαλονίκη (Thessaloniki), Ελληνική Δημοκρατία (Hellenic Republic), October 7-10, 2001, vol. I, pp. 606-609.
- L. Zeng, C. Jansen, M. Unser, P. Hunziker, "Extension of Wavelet Compression Algorithms to 3D and 4D Image Data: Exploitation of Data Coherence in Higher Dimensions Allows Very High Compression Ratios," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing IX, San Diego CA, USA, July 29-August 1, 2001, vol. 4478, pp. 427-433.
- M. Liebling, T. Blu, M. Unser, "Fresnelets—A New Wavelet Basis for Digital Holography," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing IX, San Diego CA, USA, July 29-August 1, 2001, vol. 4478, pp. 347-352.
- M. Unser, T. Blu, "Why Restrict Ourselves to Compactly Supported Basis Functions?," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing IX, San Diego CA, USA, July 29-August 1, 2001, vol. 4478, pp. 311-314.
- A. Muñoz Barrutia, R. Ertlé, M. Unser, "Fast Continuous Wavelet Transform Based on B-Splines," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing IX, San Diego CA, USA, July 29-August 1, 2001, vol. 4478, pp. 224-229.
- M. Vetterli, P. Marziliano, T. Blu, "Sampling Discrete-Time Piecewise Bandlimited Signals," Proceedings of the Fourth International Conference on Sampling Theory and Applications (SampTA'01), Orlando FL, USA, May 13-17, 2001, pp. 97-102.
- J. Kybic, T. Blu, M. Unser, "Generalized Sampling: A Variational Approach," Proceedings of the Fourth International Conference on Sampling Theory and Applications (SampTA'01), Orlando FL, USA, May 13-17, 2001, pp. 151-154.
- M. Jacob, T. Blu, M. Unser, "An Error Analysis for the Sampling of Periodic Signals," Proceedings of the Fourth International Conference on Sampling Theory and Applications (SampTA'01), Orlando FL, USA, May 13-17, 2001, pp. 45-48.
- M. Vetterli, P. Marziliano, T. Blu, "A Sampling Theorem for Periodic Piecewise Polynomial Signals," Proceedings of the Twenty-Sixth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'01), Salt Lake City UT, USA, May 7-11, 2001, vol. 6, pp. 3893-3896.
- S. Jonić, P. Thévenaz, M. Unser, "Multiresolution Spline-Based 3D/2D Registration of CT Volume and C-Arm Images for Computer-Assisted Surgery," Proceedings of the SPIE International Symposium on Medical Imaging: Image Processing (MI'01), San Diego CA, USA, February 17-22, 2001, vol. 4322, part II, pp. 1101-1109.
- M. Jacob, T. Blu, M. Unser, "A Unifying Approach and Interface for Spline-Based Snakes," Proceedings of the SPIE International Symposium on Medical Imaging: Image Processing (MI'01), San Diego CA, USA, February 17-22, 2001, vol. 4322, part I, pp. 340-347.
- J. Kybic, T. Blu, M. Unser, "Variational Approach to Tomographic Reconstruction," Proceedings of the SPIE International Symposium on Medical Imaging: Image Processing (MI'01), San Diego CA, USA, February 17-22, 2001, vol. 4322, part I, pp. 30-39.
- P. Thévenaz, P. Millet, "Multiresolution Imaging of In Vivo Ligand-Receptor Interactions," Proceedings of the SPIE International Symposium on Medical Imaging: Physiology and Function from Multidimensional Images (MI'01), San Diego CA, USA, February 18-20, 2001, vol. 4321, pp. 1-11.

Conference Papers • 2000

- J. Kybic, M. Unser, "Multidimensional Elastic Registration of Images Using Splines," Proceedings of the 2000 Seventh IEEE International Conference on Image Processing (ICIP'00), Vancouver BC, Canada, September 10-13, 2000, vol. II, pp. 455-458.
- P. Thévenaz, T. Blu, M. Unser, "Complete Parametrization of Piecewise-Polynomial Interpolators According to Degree, Support, Regularity, and Order," Proceedings of the 2000 Seventh IEEE International Conference on Image Processing (ICIP'00), Vancouver BC, Canada, September 10-13, 2000, vol. II, pp. 335-338.
- S. Horbelt, P. Thévenaz, M. Unser, "Texture Mapping by Successive Refinement," Proceedings of the 2000 Seventh IEEE International Conference on Image Processing (ICIP'00), Vancouver BC, Canada, September 10-13, 2000, vol. II, pp. 307-310.
- M. Unser, S. Horbelt, T. Blu, "Fractional Derivatives, Splines and Tomography," Proceedings of the Tenth European Signal Processing Conference (EUSIPCO'00), Tampere, Republic of Finland, September 4-8, 2000, vol. IV, pp. 2017-2020.
- M. Feilner, T. Blu, M. Unser, "Analysis of fMRI Data Using Spline Wavelets," Proceedings of the Tenth European Signal Processing Conference (EUSIPCO'00), Tampere, Republic of Finland, September 4-8, 2000, vol. IV, pp. 2013-2016.
- A. Muñoz Barrutia, T. Blu, M. Unser, "Non-Uniform to Uniform Grid Conversion Using Least-Squares Splines," Proceedings of the Tenth European Signal Processing Conference (EUSIPCO'00), Tampere, Republic of Finland, September 4-8, 2000, vol. IV, pp. 1997-2000.
- M. Jacob, T. Blu, M. Unser, "Exact Computation of Area Moments for Spline and Wavelet Curves," Proceedings of the Fifteenth International Conference on Pattern Recognition (ICPR'00), Barcelona, Kingdom of Spain, September 3-8, 2000, vol. III, pp. 131-134.
- M. Feilner, T. Blu, M. Unser, "Optimizing Wavelets for the Analysis of fMRI Data," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing VIII, San Diego CA, USA, July 31-August 4, 2000, vol. 4119, pp. 626-637.
- A. Muñoz Barrutia, T. Blu, M. Unser, "Non-Euclidean Pyramids," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing VIII, San Diego CA, USA, July 31-August 4, 2000, vol. 4119, pp. 710-720.
- M. Unser, T. Blu, "Wavelets and Radial Basis Functions: A Unifying Perspective," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing VIII, San Diego CA, USA, July 31-August 4, 2000, vol. 4119, pp. 487-493.
- S. Horbelt, A. Muñoz Barrutia, T. Blu, M. Unser, "Spline Kernels for Continuous-Space Image Processing," Proceedings of the Twenty-Fifth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'00), Istanbul, Turkey, June 5-9, 2000, vol. IV, pp. 2191-2194.
- T. Blu, M. Unser, "The Fractional Spline Wavelet Transform: Definition and Implementation," Proceedings of the Twenty-Fifth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'00), Istanbul, Turkey, June 5-9, 2000, vol. I, pp. 512-515.

Conference Papers • 1999

- T. Blu, P. Thévenaz, M. Unser, "Generalized Interpolation: Higher Quality at no Additional Cost," Proceedings of the 1999 Sixth IEEE International Conference on Image Processing (ICIP'99), 神戸市 (Kobe), Japan, October 25-28, 1999, vol. III, pp. 667-671.
- A. Muñoz Barrutia, T. Blu, M. Unser, "Efficient Image Resizing Using Finite Differences," Proceedings of the 1999 Sixth IEEE International Conference on Image Processing (ICIP'99), 神戸市 (Kobe), Japan, October 25-28, 1999, vol. III, pp. 662-666.
- J. Kybic, P. Thévenaz, M. Unser, "Compensation of Unidirectional Geometric Distortion in EPI Using Spline Warping," Proceedings of the 1999 Sixth IEEE International Conference on Image Processing (ICIP'99), 神戸市 (Kobe), Japan, October 25-28, 1999, vol. II, pp. 168-172.
- S. Horbelt, M. Unser, M. Vetterli, "Wavelet Projections for Volume Rendering," Twentieth Annual Conference of the European Association for Computer Graphics (EUROGRAPHICS'99), Milano, Italian Republic, September 7-11, 1999, pp. 56-59.
- J. Kybic, P. Thévenaz, M. Unser, "Multiresolution Spline Warping for EPI Registration," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing VII, Denver CO, USA, July 19-23, 1999, vol. 3813, pp. 571-579.
- M. Feilner, T. Blu, M. Unser, "Statistical Analysis of fMRI Data Using Orthogonal Filterbanks," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing VII, Denver CO, USA, July 19-23, 1999, vol. 3813, pp. 551-560.
- M. Unser, T. Blu, "Construction of Fractional Spline Wavelet Bases," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing VII, Denver CO, USA, July 19-23, 1999, vol. 3813, pp. 422-431.
- T. Blu, M. Unser, "A Theoretical Analysis of the Projection Error onto Discrete Wavelet Subspaces," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing VII, Denver CO, USA, July 19-23, 1999, vol. 3813, pp. 273-281.

Conference Papers • 1998

- D. Popović, S. Jonić, "Determining Synergy Between Joint Angles During Locomotion by Radial Basis Function Neural Networks," Proceedings of the Twentieth Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBS'98), Hong Kong, People's Republic of China, October 29-November 1, 1998, vol. 20, no. 5, pp. 2301-2304.
- T. Blu, P. Thévenaz, M. Unser, "Minimum Support Interpolators with Optimum Approximation Properties," Proceedings of the 1998 Fifth IEEE International Conference on Image Processing (ICIP'98), Chicago IL, USA, October 4-7, 1998, vol. III, pp. 242-245.
- P. Brigger, M. Eden, M. Unser, "B-Spline Snakes and a JAVA Interface: An Intuitive Tool for General Contour Delineation," Proceedings of the 1998 Fifth IEEE International Conference on Image Processing (ICIP'98), Chicago IL, USA, October 4-7, 1998, vol. II, pp. 277-281.
- P. Thévenaz, M. Unser, "An Efficient Mutual Information Optimizer for Multiresolution Image Registration," Proceedings of the 1998 Fifth IEEE International Conference on Image Processing (ICIP'98), Chicago IL, USA, October 4-7, 1998, vol. I, pp. 833-837.
- S. Matusiak, M. Daoudi, T. Blu, O. Avaro, "Sketch-Based Images Database Retrieval," Proceedings of the Fourth International Workshop on Advances in Multimedia Information Systems (MIS'98), Istanbul, Turkey, September 24-26, 1998, pp. 185-191.
- M. Unser, "Wavelets, Filterbanks, and the Karhunen-Loève Transform," Proceedings of the Ninth European Signal Processing Conference (EUSIPCO'98), Ρόδος (Rhodes), Ελληνική Δημοκρατία (Hellenic Republic), September 8-11, 1998, vol. III, pp. 1737-1740.
- P. Brigger, M. Unser, "Multi-Scale B-Spline Snakes for General Contour Detection," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing VI, San Diego CA, USA, July 19-24, 1998, vol. 3458, pp. 92-102.
- M. Unser, T. Blu, "Comparison of Wavelets from the Point of View of Their Approximation Error," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing VI, San Diego CA, USA, July 19-24, 1998, vol. 3458, pp. 14-21.
- L. Peyronny, O. Soligon, C. Roux, O. Avaro, T. Blu, "How to Construct an MPEG4 API: A Videoconference Application Example," Proceedings of the International Conference on Image and Multidimensional Digital Signal Processing (IMDSP '98), Alpbach , Republic of Austria, July 16, 1998, pp. 111-114.

Conference Papers • 1997

- S. Jonić, D. Popović, "Machine Learning for Prediction of Muscle Activations for a Rule-Based Controller," Proceedings of the Nineteenth Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBS'97), Chicago IL, USA, October 30-November 2, 1997, vol. 4, pp. 1781-1784.
- P. Thévenaz, M. Unser, "Separable Least-Squares Decomposition of Affine Transformations," Proceedings of the 1997 Fourth IEEE International Conference on Image Processing (ICIP'97), Santa Barbara CA, USA, October 26-29, 1997, CD-ROM paper no. 200.
- P. Brigger, S.L. Bacharach, A. Aldroubi, M. Unser, "Segmentation of Gated SPECT Images for Automatic Computation of Myocardial Volume and Ejection Fraction," Proceedings of the 1997 Fourth IEEE International Conference on Image Processing (ICIP'97), Santa Barbara CA, USA, October 26-29, 1997, vol. II, pp. 113-116.
- T. Blu, M. Unser, "Quantitative
*L*^{2}Error Analysis for Interpolation Methods and Wavelet Expansions," Proceedings of the 1997 Fourth IEEE International Conference on Image Processing (ICIP'97), Santa Barbara CA, USA, October 26-29, 1997, vol. I, pp. 663-666. - M. Eden, P. Thévenaz, "History of a Stochastic Growth Model," Proceedings of the Sixth SPIE International Workshop on Digital Image Processing and Computer Graphics (DIP'97), Applications in Humanities and Natural Sciences, Wien, Republic of Austria, October 20-22, 1997, vol. 3346, pp. 43-54.
- P. Brigger, S.L. Bacharach, G. Srinivasan, K.A. Nour, V. Dilsizian, A. Aldroubi, M. Unser, "Segmentation of Gated Tl-SPECT Images for Automatic Computation of Myocardial Volume and Ejection Fraction," Proceedings of Computers in Cardiology, Lund, Sweden, September 7-10, 1997, pp. 677-680.
- M. Unser, "Ten Good Reasons for Using Spline Wavelets," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing V, San Diego CA, USA, July 30-August 1, 1997, vol. 3169, pp. 422-431.
- P. Thévenaz, M. Unser, "Spline Pyramids for Inter-Modal Image Registration Using Mutual Information," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing V, San Diego CA, USA, July 30-August 1, 1997, vol. 3169, pp. 236-247.
- P. Brigger, M. Unser, "General Discrete Centered Image Pyramids," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing V, San Diego CA, USA, July 30-August 1, 1997, vol. 3169, pp. 212-223.
- M. Unser, "An Extension of Papoulis' Sampling Theorem for Non-Bandlimited Functions," Proceedings of the International Workshop on Sampling Theory and Applications, Aveiro, Portuguese Republic, June 16-19, 1997, pp. 10-15.
- M. Unser, J. Zerubia, "Generalized Sampling without Bandlimiting Constraints," Proceedings of the Twenty-Second IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'97), Münich, Federal Republic of Germany, April 21-24, 1997, vol. III, pp. 2113-2116.
- A. Ezbiri, A. Muñoz Barrutia, S.E. Kanellopoulos, V.A. Handerek, "High Resolution Fibre Bragg Grating Sensor Demodulation Using a Diffraction Grating Spectrometer and CCD Detection," Proceedings of the 1997/033 IEE Colloquium on Optical Techniques for SMART Structures and Structural Monitoring (OTSMARTSSM'97), London, United Kingdom, February 17, 1997, pp. 5/1-5/6.

Conference Papers • 1996

- M. Unser, "Vanishing Moments and the Approximation Power of Wavelet Expansions," Proceedings of the 1996 Third IEEE International Conference on Image Processing (ICIP'96), Lausanne VD, Swiss Confederation, September 16-19, 1996, vol. I, pp. 629-632.
- P. Thévenaz, M. Unser, "A Pyramid Approach to Sub-Pixel Image Fusion Based on Mutual Information," Proceedings of the 1996 Third IEEE International Conference on Image Processing (ICIP'96), Lausanne VD, Swiss Confederation, September 16-19, 1996, vol. I, pp. 265-268.
- T. Blu, "Shift Error in Iterated Rational Filter Banks," Proceedings of the Eighth European Signal Processing Conference (EUSIPCO'96), Trieste, Italian Republic, September 10-13, 1996, vol. II, pp. 1199-1202.
- M. Unser, M.J. Vrhel, J.F. Conway, M. Gross, P. Thévenaz, A.C. Stevens, B.L. Trus, "Resolution Assessment of 3D Reconstructions by Spectral Signal-to-Noise Ratio," Proceedings of the Eleventh European Congress on Microscopy (EUREM'96), Dublin, Eire, August 26-30, 1996, pp. III.260-III.261.
- M. Unser, P. Thévenaz, A. Aldroubi, "Construction of Shift-Orthogonal Wavelets Using Splines," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing IV, Denver CO, USA, August 6-9, 1996, vol. 2825, part I, pp. 465-473.
- M.J. Vrhel, C. Lee, M. Unser, "Comparison of Algorithms for the Fast Computation of the Continuous Wavelet Transform," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing IV, Denver CO, USA, August 6-9, 1996, vol. 2825, part I, pp. 422-431.
- A. Aldroubi, "Oblique Multiwavelet Bases: Examples," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing IV, Denver CO, USA, August 6-9, 1996, vol. 2825, part I, pp. 54-64.
- M. Unser, "Wavelets, Statistics, and Biomedical Applications," Proceedings of the Eighth IEEE Signal Processing Workshop on Statistical Signal and Array Processing, Κέρκυρα (Corfu), Ελληνική Δημοκρατία (Hellenic Republic), June 24-26, 1996, pp. 244-249.
- T. Blu, "An Iterated Rational Filter Bank for Audio Coding," Proceedings of the Third IEEE Signal Processing Society International Symposium on Time-Frequency and Time-Scale Analysis (IEEE-SP'96), Paris, French Republic, June 18-21, 1996, pp. 81-84.
- C. Lee, M. Eden, M. Unser, "Near Optimal Geometric Image Scaling Using Oblique Projection Operators," Proceedings of the Twenty-First IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'96), Atlanta GA, USA, May 7-9, 1996, vol. IV, pp. 2399-2402.
- M.J. Vrhel, C. Lee, M. Unser, "Fast Computation of the Continuous Wavelet Transform through Oblique Projections," Proceedings of the Twenty-First IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'96), Atlanta GA, USA, May 7-9, 1996, vol. III, pp. 1459-1462.
- C. Lee, M. Unser, T.A. Ketter, "Automated Connectivity-Based Thresholding Segmentation of Midsagittal Brain MR Images," Proceedings of the SPIE Conference on Visual Communication and Image Processing: Wavelets and Fractals (VCIP'96), Orlando FL, USA, March 17-20, 1996, vol. 2727, part II, pp. 713-724.

Conference Papers • 1995

- P. Thévenaz, U.E. Ruttimann, M. Unser, "Iterative Multi-Scale Registration without Landmarks," Proceedings of the 1995 Second IEEE International Conference on Image Processing (ICIP'95), Washington DC, USA, October 23-26, 1995, vol. III, pp. 228-231.
- M. Unser, "Multigrid Adaptive Image Processing," Proceedings of the 1995 Second IEEE International Conference on Image Processing (ICIP'95), Washington DC, USA, October 23-26, 1995, vol. I, pp. 49-52.
- U.E. Ruttimann, N.F. Ramsey, D.W. Hommer, P. Thévenaz, C. Lee, M. Unser, "Analysis of Functional Magnetic Resonance Images by Wavelet Decomposition," Proceedings of the 1995 Second IEEE International Conference on Image Processing (ICIP'95), Washington DC, USA, October 23-26, 1995, vol. I, pp. 633-636.
- M.J. Vrhel, C. Lee, M. Unser, "Fractal Dimension Estimation Using the Fast Continuous Wavelet Transform," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing III, San Diego CA, USA, July 9-14, 1995, vol. 2569, part II, pp. 478-488.
- M. Unser, "A General Hilbert Space Framework for the Discretization of Continuous Signal Processing Operators," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing III, San Diego CA, USA, July 9-14, 1995, vol. 2569, part I, pp. 51-61.
- A. Aldroubi, J. McGowan, "Oblique and Biorthogonal Multi-Wavelet Bases with Fast-Filtering Algorithms," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing III, San Diego CA, USA, July 9-14, 1995, vol. 2569, part I, pp. 15-26.
- C. Lee, M. Unser, T.A. Ketter, "Automatic Recognition of Corpus Callosum from Sagittal Brain MR Images," Proceedings of the SPIE Conference on Applications of Digital Image Processing XVIII, San Diego CA, USA, July 9-14, 1995, vol. 2564, pp. 528-534.
- P. Thévenaz, M. Unser, "Efficient Geometric Transformations and 3-D Image Registration," Proceedings of the Twentieth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'95), Detroit MI, USA, May 8-12, 1995, vol. V, pp. 2919-2922.
- M.J. Vrhel, C. Lee, M. Unser, "Fast Continuous Wavelet Transform," Proceedings of the Twentieth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'95), Detroit MI, USA, May 8-12, 1995, vol. II, pp. 1165-1168.
- M. Unser, A. Aldroubi, "Optimal Sampling of Non-Bandlimited Signals with Applications to Image Processing," Final Program and Advance Printing of Papers, Fourty-Eighth Annual Conference of the Society for Imaging Science and Technology: Imaging on the Information Superhighway (IS&T'95), Washington DC, USA, May 7-11, 1995, pp. 370-375.

Conference Papers • 1994

- M. Unser, M.A. Neimark, C. Lee, "Affine Transformations of Images: A Least Squares Formulation," Proceedings of the 1994 First IEEE International Conference on Image Processing (ICIP'94), Austin TX, USA, November 13-16, 1994, vol. III, pp. 558-561.
- U.E. Ruttimann, M. Unser, D. Rio, "Statistical Analysis of Image Differences by Wavelet Decomposition," Proceedings of the Sixteenth Annual International Conference of the IEEE Engineering in Medicine and Biology Society, Engineering Advances: New Opportunities for Biomedical Engineers (EMBS'94), Baltimore MD, USA, November 3-6, 1994, vol. I, pp. A28-A29.
- V. Kober, M. Unser, L.P. Yaroslavsky, "Spline and Sinc Signal Interpolations in Image Geometrical Transforms," Proceedings of the SPIE Fifth International Workshop on Digital Image Processing and Computer Graphics (DIP'94), Samara, Russia, August 23-26, 1994, vol. 2363, pp. 152-161.
- M. Unser, A. Aldroubi, "Fast Algorithms for Running Wavelet Analyses," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing II, San Diego CA, USA, July 24-29, 1994, vol. 2303, pp. 308-319.
- A. Aldroubi, M. Unser, "Oblique Projections in Discrete Signal Subspaces of
*l*_{2}and the Wavelet Transform," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing II, San Diego CA, USA, July 24-29, 1994, vol. 2303, pp. 36-46. - M.J. Vrhel, M. Unser, "Multi-Channel Deconvolution: The Generalized Sampling Approach," Proceedings of the SPIE Conference on Image Reconstruction and Restoration, San Diego CA, USA, July 24-29, 1994, vol. 2302, pp. 188-199.
- P. Thévenaz, H. Hügli, "Conformity, A New Method for Text-Independent Speaker Recognition," Proceedings of the 1994 ESCA Workshop on Automatic Speaker Recognition, Identification, and Verification, Martigny VS, Swiss Confederation, April 5-7, 1994, pp. 63-66.

Conference Papers • 1993

- M. Unser, A. Aldroubi, C.R. Gerfen, "A Multiresolution Image Registration Procedure Using Spline Pyramids," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing, San Diego CA, USA, July 15-16, 1993, vol. 2034, pp. 160-170.
- M. Unser, "An Extension of the Karhunen-Loève Transform for Wavelets and Perfect Reconstruction Filterbanks," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing, San Diego CA, USA, July 15-16, 1993, vol. 2034, pp. 45-56.
- A. Aldroubi, M. Unser, "Generalized Sampling Theory and Application to Multiresolutions and Wavelets of
*L*_{2}," Proceedings of the SPIE Conference on Mathematical Imaging: Wavelet Applications in Signal and Image Processing, San Diego CA, USA, July 15-16, 1993, vol. 2034, pp. 24-32. - M. Unser, "Texture Discrimination Using Wavelets," Proceedings of the 1993 IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'93), New York NY, USA, June 15-17, 1993, pp. 640-641.
- M. Unser, "Efficient Dyadic Wavelet Transformation of Images Using Interpolation Filters," Proceedings of the Eighteenth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'93), Minneapolis MN, USA, April 27-30, 1993, vol. V, pp. 149-152.
- T. Blu, O. Rioul, "Wavelet Regularity of Iterated Filter Banks with Rational Sampling Changes," Proceedings of the Eighteenth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'93), Minneapolis MN, USA, April 27-30, 1993, vol. III, pp. 213-216.

Conference Papers • 1992

- M. Unser, A. Aldroubi, "Spline Multiresolutions and Wavelet Transforms," Proceedings of the 1992 IEEE Signal Processing Society International Symposium on Time-Frequency and Time-Scale Analysis (IEEE-SP'92), Victoria BC, Canada, October 4-6, 1992, pp. 315-318.
- T. Blu, "Iterated Rational Filter Banks—Underlying Limit Functions," Proceedings of the IEEE Signal Processing Society Digital Signal Processing Workshop, Utica IL, USA, September 13-16, 1992, pp. 1.8.1-1.8.2.
- M. Unser, A. Aldroubi, "Polynomial Spline Signal Processing Algorithms," Proceedings of the Seventeenth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'92), San Francisco CA, USA, March 23-26, 1992, vol. III, pp. 177-180.
- P. Thévenaz, H. Hügli, "A Residue-Based Approach to Text-Independent Speaker Recognition," Proceedings of the First Swiss Symposium on Pattern Recognition and Computer Vision, Lausanne VD, Swiss Confederation, January 30-31, 1992, pp. 35-41.

Conference Papers • 1991

- J.P. Guédon, M. Unser, Y. Bizais, "Pixel Intensity Distribution Models for Filtered Back-Projection," Conference Record of the 1991 IEEE Nuclear Science Symposium and Medical Imaging Conference, Santa Fé NM, USA, November 2-9, 1991, vol. III, pp. 2063-2067.
- M. Cordaro, M. Stone, M.H. Goldstein, M. Unser, "A Dynamic Three-Dimensional Representation of the Tongue Surface Based on Ultrasound Scans for Time-Varying Vocalizations," Proceedings of the Thirteenth Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBS'91), Orlando FL, USA, October 31-November 3, 1991, pp. 1885-1886.
- S. Mayrargue, T. Blu, "Relationship Between High-Resolution Methods and Discrete Fourier Transform," Proceedings of the Sixteenth IEEE International Conference on Acoustics, Speech and Signal Processing (ICASSP'91), Toronto ON, Canada, May 14-17, 1991, vol. V, pp. 3321-3324.

Conference Papers • 1990

- A. Aldroubi, M. Unser, M. Eden, "Asymptotic Properties of Least Squares Spline Filters and Applications to Multi-Scale Decomposition of Signals," Proceedings of the International Symposium on Information Theory and Its Applications (ISITA'90), Honolulu HI, USA, November 27-30, 1990, pp. 271-274.
- L.X. Dong, G. Pelle, M. Unser, Y. Brahimi, P. Brun, "Myocardial Border Tracking in M-Mode Echocardiograms Using Joint Process Estimation," Proceedings of the 1990 IEEE Conference on Computers in Cardiology, Chicago IL, USA, September 23-26, 1990, pp. 367-370.
- P. Thévenaz, H. Hügli, "Combining Four Text Independent Speaker Recognition Methods," Proceedings of the 1990 European Speech Communication Association Tutorial and Research Workshop on Speaker Characterization in Speech Technology, Edinburgh, United Kingdom, June 26-28, 1990, pp. 187-191.

Conference Papers • 1989

- M. Unser, L. Dong, G. Pelle, P. Brun, M. Eden, "Restoration of Echocardiograms Using Time Warping and Periodic Averaging on a Normalized Time Scale," Proceedings of the SPIE Conference on Medical Imaging III: Image Processing (SPIE-MI3IP'89), Newport Beach CA, USA, January 29-31, 1989, vol. 1092, pp. 84-93.

Conference Papers • 1988

- G. Pelle, M. Unser, L.X. Dong, Y. Brahimi, P. Brun, "Automatic Analysis of M-Mode Echocardiograms," Proceedings of the Tenth Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBS'88), New Orleans LA, USA, November 4-7, 1988, vol. I, pp. 449.
- P. Thévenaz, H. Hügli, "Optimal Speed Measurement by Optical Flow Using Line Image Sequences," Proceedings of the Fourth European Signal Processing Conference on Theories and Applications (EUSIPCO'88), Grenoble, French Republic, September 5-8, 1988, pp. 1629-1632.
- M. Unser, H. van Hamme, P. De Muynck, E. van Denhaute, J. Cornelis, "Karhunen-LoÈve Analysis of Dynamic Sequences of Thermographic Images for Early Breast Cancer Detection," Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'88), Ann Arbor MI, USA, June 5-9, 1988, pp. 592-596.
- M. Unser, M. Eden, "A Multi-Resolution Feature Reduction Technique for Image Segmentation with Multiple Components," Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition (CVPR'88), Ann Arbor MI, USA, June 5-9, 1988, pp. 568-573.
- P. Thévenaz, H. Hügli, "Optical Flow Estimation Using Line Image Sequences," Proceedings of the British Pattern Recognition Association Fourth International Conference on Pattern Recognition (BPRA'88), Cambridge, United Kingdom, March 28-30, 1988, [Lecture Notes in Computer Science, vol. 301, J. Kittler, Ed., Springer-Verlag, 1988], pp. 468-477.
- D. Sage, P.Y. Coulon, "A Contour Feature Tracking System," Proceedings of the Seventh International Conference On Robot Vision And Sensory Controls (RoViSeC-7), Zürich ZH, Swiss Confederation, February 2-4, 1988, pp. 247-256.

Conference Papers • 1987

- M. Unser, "A family of Discrete Fourier Transforms with Pseudo-Cyclic Convolution Properties," Proceedings of the Twelfth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'87), Dallas TX, USA, April 6-9, 1987, vol. III, pp. 1815-1818.

Conference Papers • 1984

- M. Unser, "Local Linear Transforms for Texture Analysis," Proceedings of the Seventh IEEE International Conference on Pattern Recognition (ICPR'84), Montréal QC, Canada, July 30-August 2, 1984, vol. II, pp. 1206-1208.
- F. Ade, N. Lins, M. Unser, "Comparison of Various Filter Sets for Defect Detection in Textiles," Proceedings of the Seventh IEEE International Conference on Pattern Recognition (ICPR'84), Montréal QC, Canada, July 30-August 2, 1984, vol. I, pp. 428-431.
- A. Ikonomopoulos, M. Unser, "A Directional Filtering Approach to Texture Discrimination," Proceedings of the Seventh IEEE International Conference on Pattern Recognition (ICPR'84), Montréal QC, Canada, July 30-August 2, 1984, vol. I, pp. 87-89.

Conference Papers • 1983

- M. Unser, "A Fast Texture Classifier Based on Cross Entropy Minimisation," Proceedings of the Second European Signal Processing Conference on Theories and Applications (EUSIPCO'83), Erlangen, Federal Republic of Germany, September 12-16, 1983, pp. 261-264.

### Conference Abstracts

Conference Abstracts • 2022

- E. Gómez-de-Mariscal, C. García-López-de-Haro, C. de-la-Torre-Gutiérrez, R.F. Laine, G. Jacquemet, R. Henriques, D. Sage, A. Muñoz-Barrutia, "Reproducible User-Friendly Deep Learning Workflows for Microscopy Image Analysis with deepImageJ," Proceedings of the 2022 Workshop on Focus on Microscopy (FM'22), Porto, Portuguese Republic, Virtual, April 10-13, 2022, paper no. TU-PAR1-D.
- D. Sage, "Microscopy Image Analysis—The Shift to Deep Learning?," First Seminar on Fluorescence Neuro-Imaging and Photonics | T3 Software (FNIP'22), Padua, Italian Republic, Virtual, March 1, 2022.

Conference Abstracts • 2021

- A. Badoual, D. Sage, "Bioimage Analysis: Practice Deep Learning Without Coding," Proceedings of the Ninth Edition of the CNRS Thematic School, Functional Microscopy for Biology (MiFoBio'21), Presqu'île de Giens, French Republic, November 5-12, 2021, pp. 138
- E. Soubies, D. Sage, "Obtenir la PSF d'un système de microscopie de fluorescence," Proceedings of the Ninth Edition of the CNRS Thematic School, Functional Microscopy for Biology (MiFoBio'21), Presqu'île de Giens, French Republic, November 5-12, 2021, pp. 109
- F. Soulez, D. Sage, "Deconvolution 3D," Proceedings of the Ninth Edition of the CNRS Thematic School, Functional Microscopy for Biology (MiFoBio'21), Presqu'île de Giens, French Republic, November 5-12, 2021, pp. 108-109
- D. Sage, "Microscopy Image Analysis: The Shift to Deep Learning?," Proceedings of the Ninth Edition of the CNRS Thematic School, Functional Microscopy for Biology (MiFoBio'21), Presqu'île de Giens, French Republic, November 5-12, 2021, pp. 39
- L.G. Jensen, T.Y. Hoh, D.J. Williamson, S. Simoncelli, D. Nieves, J. Griffié, D. Sage, P. Rubin-Delanchy, D.M. Owen, "Methods for Correction of Multiple-Blinking Artefacts and Cluster Analysis of SMLM Data," Single Molecule Localization Microscopy Symposium (SMLMS'21), Lausanne VD, Swiss Confederation, August 31-September 2, 2021.
- D. Nieves, J.A. Pike, F. Levet, J. Griffié, D. Sage, E.A.K. Cohen, J.-B. Sibarita, M. Heilemann, D.M. Owen, "A Framework for Evaluating the Performance of SMLM Cluster Analysis Algorithms," Single Molecule Localization Microscopy Symposium (SMLMS'21), Lausanne VD, Swiss Confederation, August 31-September 2, 2021.
- M. Pourya, S. Aziznejad, M. Unser, D. Sage, "A Hierarchical Graph-Based Method for Single-Molecule Localization Microscopy Clustering," Single Molecule Localization Microscopy Symposium (SMLMS'21), Lausanne VD, Swiss Confederation, August 31-September 2, 2021.
- D. Sage, "Super Resolution Microscopy—Open Benchmarking Resources for SMLM Community (sum.epfl.ch)," Single Molecule Localization Microscopy Symposium (SMLMS'21), Lausanne VD, Swiss Confederation, August 31-September 2, 2021.
- D. Sage, "Microscopy Image Analysis: The Shift to Deep Learning," Dix-septième colloque de la Société Française des Microscopies (SFμ'21), Reims, French Republic, July 6-9, 2021.
- E. Gomez-de-Mariscal, C. Garcia-Lopez-de-Haro, A. Munoz-Barrutia, D. Sage, "DeepImageJ: Bridging Deep Learning to ImageJ," European Light Microscopy Initiative 2021 (elmi'21), Virtual, June 22-25, 2021.
- M. Unser, "Deep Splines," Plenary talk, Twenty-Eighth European Signal Processing Conference (EUSIPCO'20), Amsterdam, Kingdom of the Netherlands, Virtual, January 18-22, 2021.

Conference Abstracts • 2020

- D. Sage, "Achieving Higher Resolution in 3D Fluorescence Imaging: Deconvolution Microscopy and Single-Molecule Localization Microscopy," Actes de la journée thématique de l'INS21—Journée nouvelles imageries, Sciences de l'information et santé (JNI'20), Rennes, French Republic, December 16, 2020, pp. 4.
- M. Unser, "From Model-Based to Data-Driven Medical Image Reconstruction," Keynote address, The Fourth International Symposium on Image Computing and Digital Medicine (ISICDM'20), Shenyang, People's Republic of China, December 5-8, 2020.
- E. Gómez-de-Mariscal, C. García-López-de-Haro, L. Donati, M. Unser, A. Muñoz-Barrutia, D. Sage, "DeepImageJ: A User-Friendly Plugin to Run Deep Learning Models in ImageJ," Spanish & Portuguese Advanced Optical Microscopy Meeting 2020 (SPAOM'20), Valencia, Kingdom of Spain, Virtual, November 24-27, 2020.
- D. Sage, "3D Deconvolution Microscopy (with DeconvolutionLab2)," Invited lecture, Virtual Autumn Course, Centre for Biomedical Image Analysis, Faculty of Informatics, Masaryk University, Brno, Czech Republic, Virtual, October 2-December 11, 2020.
- M. Unser, "Splines and Machine Learning: From Classical RKHS Methods to Deep Neural Nets," Keynote address, IEEE International Workshop on Machine Learning for Signal Processing (MLSP'20), Espoo, Republic of Finland, Virtual, September 21-24, 2020.
- H. Gupta, T.H. Phan, J. Yoo, M. Unser, "Multi-CryoGAN: Reconstruction of Continuous Conformations in Cryo-EM Using Generative Adversarial Networks," Proceedings of a Workshop of the Sixteenth European Conference on Computer Vision (ECCV'20), Virtual, August 23-28, 2020.
- R. Zhou, M. El Helou, D. Sage, T. Laroche, A. Seitz, S. Süsstrunk, "W2S: Microscopy Data with Joint Denoising and Super-Resolution for Widefield to SIM Mapping," Proceedings of a Workshop of the Sixteenth European Conference on Computer Vision (ECCV'20), Virtual, August 23-28, 2020.
- M. Unser, "Splines and Imaging: From Compressed Sensing to Deep Neural Nets," Plenary talk, Fifteenth Biennial Conference, 2020 International Conference on Signal Processing and Communications (SPCOM'20), Bangalore, Republic of India, July 19-24, 2020.
- E. Gomez-de-Mariscal, C. Garcia-Lopez-de-Haro, L. Donati, M. Unser, A. Munoz-Barrutia, D. Sage, "DeepImageJ: Bridging Deep Learning to ImageJ," Proceedings of the Seventeenth IEEE International Symposium on Biomedical Imaging (ISBI'20), Iowa City IA, USA, April 5-7, 2020, pp. 1308.
- L. Donati, E. Soubies, T.-A. Pham, M. Unser, "User-Friendly Building of Reconstruction Algorithms for Solving Inverse Problems," Proceedings of the Seventeenth IEEE International Symposium on Biomedical Imaging (ISBI'20), Iowa City IA, USA, April 5-7, 2020, pp. 1307.
- D. Sage, "Achieving Higher Resolution in 3D Fluorescence Imaging: Deconvolution Microscopy and Single-Molecule Localization Microscopy," Invited talk, Fifteenth Workshop "Journées imagerie optique non conventionnelle" (GdRISIS'20), Paris, French Republic, March 11-12, 2020.
- E. Gómez-de-Mariscal, C. García-López-de-Haro, L. Donati, M. Unser, A. Muñoz Barrutia, D. Sage, "DeepImageJ: Bridging Deep Learning to ImageJ," Fourth Network of European Bioimage Analysts Conference & Symposium (NEUBIAS'20), Bordeaux, French Republic, March 4-6, 2020.
- J. Griffié, D. Sage, "SMLM Flight Simulator Workshop," Proceedings of the 2020 Quantitative BioImaging Conference (QBI'20), Oxford, United Kingdom, January 6-9, 2020, paper no. 536.
- T.-a. Pham, N. Brandenberg, S. Hoehnel, B. Rappaz, M. Unser, M. Lütolf, D. Sage, "Quantitative Image-Analysis of Organoids with High-Throughput Digital Holography Microscopy," Proceedings of the 2020 Quantitative BioImaging Conference (QBI'20), Oxford, United Kingdom, January 6-9, 2020, paper no. 365.
- L. Donati, E. Soubies, M. Unser, "User-Friendly Building of Reconstruction Algorithms with GlobalBioIm," Proceedings of the 2020 Quantitative BioImaging Conference (QBI'20), Oxford, United Kingdom, January 6-9, 2020, paper no. 345.
- J. Griffié, P. Rolland, D. Sage, R. Lang, V. Cevher, S. Manley, "Towards Bayesian Based Smart Microscopy," Proceedings of the 2020 Quantitative BioImaging Conference (QBI'20), Oxford, United Kingdom, January 6-9, 2020, paper no. 283.

Conference Abstracts • 2019

- A. Muñoz Barrutia, D. Sage, "Bridging Deep Learning to ImageJ," Community Workshop: Bioimage Analysis Open-Source Software Tools, Conference on Spanish & Portuguese Advanced Optical Microscopy (SPAOM'19), Coimbra, Portuguese Republic, November 6-8, 2019.
- T. Debarre, S. Aziznejad, M. Unser, "Sparse Dictionaries for Continuous-Domain Inverse Problems," Proceedings of the Workshop on Signal Processing with Adaptive Sparse Structured Representations (SPARS'19), Toulouse, French Republic, July 1-4, 2019, paper no. 177.
- Q. Denoyelle, V. Duval, G. Peyré, E. Soubies, "The Sliding Frank-Wolfe Algorithm for the BLASSO," Proceedings of the Workshop on Signal Processing with Adaptive Sparse Structured Representations (SPARS'19), Toulouse, French Republic, July 1-4, 2019, paper no. 172.
- S. Aziznejad, M. Unser, "Multiple-Kernel Regression with Sparsity Constraints," Proceedings of the Workshop on Signal Processing with Adaptive Sparse Structured Representations (SPARS'19), Toulouse, French Republic, July 1-4, 2019, paper no. 103.
- J. Fageot, V. Uhlmann, A. Depeursinge, Z. Püspöki, D. Sage, M. Unser, "Radial B-Splines for Optimal Detection in Images," Proceedings of the Sixteenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'19), Venice, Italian Republic, April 8-11, 2019, pp. 1849.
- D. Sage, T.-A. Pham, M. Unser, "3D Single Molecule Localization Microscopy: Key Outcomes of the Software Benchmarking," Proceedings of the Sixteenth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'19), Venice, Italian Republic, April 8-11, 2019, pp. 610.
- D. Sage, F. Soulez, Z. Püspöki, A. Badoual, "Computational Bioimaging—Selected Topics," Journée MICA 2019: Analyse d'images et bases de données (MICA'19), Valbonne, French Republic, January 22, 2019.
- D. Sage, J. Ries, B. Lelandais, "Single-Molecule Localization Microscopy: Performing 3D Super-Resolution Reconstruction Using Open-Source Software," Proceedings of the 2019 Quantitative Bioimaging Conference (QBI'19), Rennes, French Republic, January 9-11, 2019, pp. 204.
- A. Badoual, A. Galan, D. Sage, M. Unser, "Segmentation of Adjacent Cells in a
*C. elegans*Embryo Using a Multi-Compartment Active Contour," Proceedings of the 2019 Quantitative Bioimaging Conference (QBI'19), Rennes, French Republic, January 9-11, 2019, pp. 68.

Conference Abstracts • 2018

- F. Soulez, D. Sage, "3D Deconvolution Microscopy," Proceedings of Functional Microscopy for Biology (MiFoBio'18), Seignosses, French Republic, October 5-12, 2018, pp. 113.
- D. Fortun, D. Sage, "Create Your Own ImageJ Plugin as Easy as Pie," Proceedings of Functional Microscopy for Biology (MiFoBio'18), Seignosses, French Republic, October 5-12, 2018, pp. 110.
- M. Unser, "Representer Theorems for the Design of Deep Neural Networks and the Resolution of Continuous-Domain Inverse Problems," Keynote address, First International Workshop on Machine Learning for Medical Image Reconstruction (MLMIR'18), Granada, Kingdom of Spain, September 16, 2018.
- E. Soubies, "Splitting Based Methods for Structured Illumination Microscopy," OSA Imaging and Applied Optics Congress on Mathematics in Imaging (MI'18), Orlando FL, USA, June 25-28, 2018.
- E. Soubies, M. Unser, "Efficient Splitting Strategies for Structured Illumination Microscopy," SIAM Conference on Imaging Science (SIS'18), Bologna, Italian Republic, June 5-8, 2018, poster no. 1.
- A. Badoual, "Subdivision-Based Active Contours," SIAM Conference on Imaging Science (SIS'18), Bologna, Italian Republic, June 5-8, 2018, session MS47-2.
- M. McCann, M. Unser, "The Role of Discretization in x-Ray CT Reconstruction," SIAM Conference on Imaging Science (SIS'18), Bologna, Italian Republic, June 5-8, 2018, session MS47-2.
- V. Uhlmann, "Statistical Optimality of Hermite Splines for the Reconstruction of Self-Similar Signals," SIAM Conference on Imaging Science (SIS'18), Bologna, Italian Republic, June 5-8, 2018, session MS47-2.
- C. Conti, L. Romani, M. Unser, "Hermite-Like Representation of Images in Terms of Samples with Local Tangents," SIAM Conference on Imaging Science (SIS'18), Bologna, Italian Republic, June 5-8, 2018, session MS47-1.
- H. Gupta, J. Fageot, M. Unser, "Optimality of Splines for the Resolution of Linear Inverse Problems with Tikhonov or Total-Variation Regularization," SIAM Conference on Imaging Science (SIS'18), Bologna, Italian Republic, June 5-8, 2018, session MS47-1.
- E. Soubies, "Exact Continuous Relaxations for the ℓ
_{0}-Regularized Least-Squares Criteria," SIAM Conference on Imaging Science (SIS'18), Bologna, Italian Republic, June 5-8, 2018, session MS37-2. - A. Badoual, L. Romani, D. Schmitter, M. Unser, "Subdivision-Based Deformable Models for Extracting Volumetric Structures from Biomedical Images," SIAM Conference on Imaging Science (SIS'18), Bologna, Italian Republic, June 5-8, 2018, session MS2-4.

Conference Abstracts • 2017

- E. Soubies, "Dictionary Learning Based on Sparse Distribution Tomography for 3D Deconvolution Microscopy," International Workshop on Dictionary Learning on Manifolds (IWDLM'17), Nice, French Republic, September 4-6, 2017.
- T.-a. Pham, D. Sage, S. Holden, "Developments of the Ongoing 3D SMLM Software Challenge," Seventh Single Molecule Localization Microscopy Symposium (SMLMS'17), London, United Kingdom, August 30-September 1, 2017.
- M. Unser, "Computational Bioimaging: How to Further Reduce Exposure and/or Increase Image Quality," Thirty-Ninth Annual International Conference of the IEEE Engineering in Medicine and Biology Society, in conjunction with the biennial Conference of the French Society of Biological and Medical Engineering (EMBC'17), Jeju-do, Republic of Korea, July 11-15, 2017.
- D. Sage, "Computational Methods for High Resolution 3D Fluorescence Microscopy," Invited talk, First BioImage Analysis Community Conference "Workflows and Open Tools" (NEUBIAS2020'17), Lisbon, Portuguese Republic, February 12-17, 2017.

Conference Abstracts • 2016

- S. Colabrese, M. Castello, G. Vicidomini, A. Del Bue, D. Sage, "A Study on the Application of Machine Learning Techniques on 2D and 3D SMLM—SMLM Software Challenge," Sixth Single Molecule Localization Microscopy Symposium (SMLMS'16), Lausanne VD, Swiss Confederation, August 28-30, 2016.
- D. Sage, "Challenge for Benchmarking Single-Molecule Localization Microscopy Software Packages," Sixth Single Molecule Localization Microscopy Symposium (SMLMS'16), Lausanne VD, Swiss Confederation, August 28-30, 2016.
- S. Trépout, L. Donati, M. Nilchian, M. Unser, S. Marco, "Random-Beam STEM Acquisition Method for Tomographic Reconstruction Based on Compressive Sensing," Thirteenth International Conference on x-Ray Microscopy (XRM'16), Oxford, United Kingdom, August 15-19, 2016.
- L. Donati, D. Fortun, D. Sage, M. Unser, "Higher-Order Total Variation Reconstruction for Structured Illumination Microscopy (SIM)," Proceedings of the 2016 ZEISS Symposium on Optics in the Digital World (ZSODW'16), Oberkochen, Federal Republic of Germany, June 23, 2016.
- D. Sage, "Open Software Tools for Microscopy Image Processing," Invited talk, Sixteenth International ELMI Meeting (IELMIM'16), Debrecen, Hungary, May 24-27, 2016, pp. 47.
- V. Uhlmann, D. Schmitter, M. Unser, "Shape-Constrained Tracking with Active Contours," SIAM Conference on Imaging Science (SIS'16), Albuquerque NM, USA, May 23-26, 2016, session MS10.
- N. Chu, R. Nussbaumer, L. Donati, D. Fortun, D. Sage, M. Unser, "A Robust Reconstruction and Pattern Calibration Framework for Structured Illumination Microscopy," 2016 Quantitative BioImaging Conference (QBIC'16), Delft, Kingdom of the Netherlands, January 13-15, 2016.

Conference Abstracts • 2015

- E. Bostan, S. Lefkimmiatis, O. Vardoulis, N. Stergiopulos, M. Unser, "Improved Variational Denoising of Flow Fields with Application to Phase-Contrast MRI Data," 2015 Twenty-Second IEEE International Conference on Image Processing (ICIP'15), Québec QC, Canada, September 27-30, 2015, TEC-P19.5.
- E. Bostan, M. Unser, J.P. Ward, "Divergence-Free Wavelet Frames," 2015 Twenty-Second IEEE International Conference on Image Processing (ICIP'15), Québec QC, Canada, September 27-30, 2015, TEC-P19.2.
- D. Schmitter, C. Gaudet-Blavignac, D. Piccini, M. Unser, "Deformable Models for the Construction of 3D User-Interactive Segmentation Algorithms," 2015 Twenty-Second IEEE International Conference on Image Processing (ICIP'15), Québec QC, Canada, September 27-30, 2015, SNT-S6.1.
- M. Unser, "Sparse Stochastic Processes: A Unifying Statistical Framework for Modern Image Processing," Tutorial, 2015 Twenty-Second IEEE International Conference on Image Processing (ICIP'15), Québec QC, Canada, September 27-30, 2015, TPM-T5.
- M. Unser, "Challenges and Opportunities in Biological Imaging," Plenary talk, 2015 Twenty-Second IEEE International Conference on Image Processing (ICIP'15), Québec QC, Canada, September 27-30, 2015.
- M. Unser, "Sparse Modeling and the Resolution of Inverse Problems in Bimedical Imaging," Invited lecture, 2015 HIT International Summer School on Pure and Applied Mathematics (ISSPAM'15), Harbin, People's Republic of China, July 6-August 9, 2015.
- M. Storath, "Joint Reconstruction and Segmentation of Tomographic Data Using the Potts Model," Proceedings of the Conference on Applied Inverse Problems (AIP'15), Helsinki, Republic of Finland, May 25-29, 2015, pp. 38.
- M. Unser, "Sparse Modeling and the Resolution of Inverse Problems in Biomedical Imaging," Keynote address, Twelfth IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'15), Brooklyn NY, USA, April 16-19, 2015.
- M. Unser, "Wavelets and Stochastic Processes: How the Gaussian World Became Sparse," Invited lecture, 30 Years of Wavelets: Impact and Future, Marseille, French Republic, January 23-24, 2015.

Conference Abstracts • 2014

- M. Unser, "Sparse Stochastic Processes with Application to Biomedical Imaging," Keynote address, International Conference on Image Analysis and Recognition (ICIAR'14), Vilamoura, Portuguese Republic, October 22-24, 2014.
- M. Unser, "Multidimensional Wavelets and Invariance Principles for the Analysis of Bioimages," Plenary talk, BioImage Informatics (BII'14), Leuven, Kingdom of Belgium, October 8-10, 2014.
- D. Schmitter, R. Delgado-Gonzalo, M. Unser, "Separable Parameterization of the Sphere using Compactly Supported Interpolatory Basis Functions," First International Conference on Subdivision, Geometric and Algebraic Methods, Isogeometric Analysis and Refinability in Tuscany (SMART'14), Pontignano, Italian Republic, September 28-October 1, 2014.
- M. Unser, "Sparse Stochastic Processes, Matched Wavelet Expansions and ICA," Keynote address, 2014 IEEE Workshop on Statistical Signal Processing (WSP'14), Broadbeach QLD, Commonwealth of Australia, June 29-July 2, 2014.
- E. Bostan, O. Vardoulis, D. Piccini, P. Tafti, N. Stergiopulos, M. Unser, "Spatio-Temporal Regularization of Flow-Fields," Eleventh IEEE EMBS International Summer School on Biomedical Imaging, Saint-Jacut-de-la-Mer, French Republic, June 19-27, 2014.
- Z. Püspöki, M. Unser, "Local Symmetry Assessment in Bioimages," Eleventh IEEE EMBS International Summer School on Biomedical Imaging, Saint-Jacut-de-la-Mer, French Republic, June 19-27, 2014.
- M. Unser, "Sparse Stochastic Processes and Operator-Like Wavelet Expansions," Keynote address, Proceedings of the Fifth International Conference on Computational Harmonic Analysis, Twenty-Ninth Annual Shanks Lecture (CHA'14), Vanderbilt TN, USA, May 19-23, 2014, pp. 61.
- A. Roche, D. Schmitter, B. Maréchal, D. Ribes, A. Abdulkadir, M. Bach Cuadra, A. Daducci, C. Granziera, S. Klöppel, P. Maeder, R. Meuli, G. Krueger, "Volume-Based
*vs.*Voxel-Based Brain Morphometry in Alzheimer's Disease Prediction," Joint Annual Meeting of the of the International Society for Magnetic Resonance in Medicine and the European Society for Magnetic Resonance in Medicine and Biology (ISMRM/ESMRMB '14), Milano, Italian Republic, May 10-16, 2014, pp. 4733. - M. Unser, "An Introduction to Sparse Stochastic Processes," Tutorial, Thirty-Ninth IEEE International Conference on Acoustics, Speech, and Signal Processing (ICASSP'14), Firenze, Italian Republic, May 4-9, 2014.
- M. Unser, "Sparse Stochastic Processes: A Statistical Framework for Compressed Sensing and Biomedical Image Reconstruction," Tutorial, Eleventh IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'14), Beijing, People's Republic of China, April 29-May 2, 2014.

Conference Abstracts • 2013

- Z. Püspöki, C. Vonesch, M. Unser, "Symmetric Junctions in Biological Micrographs," Proceedings of the Second International Symposium in Applied Bioimaging: From Molecule to Man (ISAB'13), Porto, Portuguese Republic, October 3-4, 2013.
- D. Sage, "Bioimage Informatics Algorithms: Detection, Localization, and Tracking Fluorescent Particles," Workshop "Collective Motion of Active Swimmers" (MOTIMO'13), Valbonne, French Republic, September 25-26, 2013.
- D. Sage, "Bioimage Informatics: Image-Processing Algorithms and Life-Science Applications," International Neuroinformatics Coordinating Facility (Belgian Node) Training in Neuroinformatics 2013: Imaging the Brain at Different Scales—How to Integrate Multi-Scale Structural Information? (INCF-TN'13), Antwerp, Kingdom of Belgium, September 2-6, 2013.
- T. Mannic, P. Meyer, F. Triponez, M. Pusztaszeri, G. Le Martelot, O. Mariani, D. Sage, J. Philippe, C. Dibner, "Circadian Clock Characteristics Are Altered in Human Thyroid Malignant Nodules," Proceedings of the Thirteenth Congress of the European Biological Rhythms Society (EBRS'13), Münich, Federal Republic of Germany, August 18-22, 2013, pp. 80.
- A. Amini, M. Unser, "Not All ℓ
_{p}-Norms Are Compatible with Sparse Stochastic Processes," Signal Processing with Adaptive Sparse Structured Representations (SPARS'13), Lausanne VD, Swiss Confederation, July 8-11, 2013. - E. Bostan, U.S. Kamilov, M. Nilchian, M. Unser, "Consistent Discretization of Linear Inverse Problems Using Sparse Stochastic Processes," Signal Processing with Adaptive Sparse Structured Representations (SPARS'13), Lausanne VD, Swiss Confederation, July 8-11, 2013.
- U.S. Kamilov, A. Bourquard, M. Unser, "Sparse Image Deconvolution with Message Passing," Signal Processing with Adaptive Sparse Structured Representations (SPARS'13), Lausanne VD, Swiss Confederation, July 8-11, 2013.
- M. Unser, "Sparse Stochastic Processes: A Continuous-Domain Statistical Framework for Compressed Sensing," Plenary talk, Signal Processing with Adaptive Sparse Structured Representations (SPARS'13), Lausanne VD, Swiss Confederation, July 8-11, 2013.
- M. Unser, "Sparse Stochastic Processes: A Statistical Framework for Modern Signal Processing," Plenary talk, International Conference on Systems, Signals and Image Processing (IWSSIP'13), Bucharest, Romania, July 7-9, 2013.
- P.O. Michel, R. Delgado-Gonzalo, M. Hubert, L. Baldi, D.L. Hacker, M. Unser, F.M. Wurm, "Assessment of Chromosomal Length Variation in CHO Cells," Proceedings of the Twenty-Third Meeting of the European Society for Animal Cell Technology (ESACT'13), Lille, French Republic, June 23-26, 2013, pp. 206.
- M. Unser, "Not Available," Invited talk, Thirteenth International ELMI Meeting (IELMIM'13), Arcachon, French Republic, May 20-24, 2013.
- O. Mariani, V. Uhlmann, D. Sage, M. Unser, "BisQuit: Open-Source Interactive Tool for Image Sequence Analysis," Second Swiss Image-Based Screening Conference (SIBSC'13), Lausanne VD, Swiss Confederation, June 10-11, 2013.
- R. Delgado-Gonzalo, M. Unser, "Towards a Unified Portal for Bioimaging Software: The Open Bio Image Alliance," Proceedings of the All SystemsX.ch Day 2013 (ASXD'13), Bern BE, Swiss Confederation, May 13, 2013, pp. 68.

Conference Abstracts • 2012

- D. Sage, D. Prodanov, J.-Y. Tinevez, J. Schindelin, "Daniel Sage: MIJ: Making Interoperability Between ImageJ and Matlab Possible," ImageJ User & Developer Conference (IUDC'12), Mondorf-les-Bains, Grand Duchy of Luxembourg, October 24-26, 2012.
- D. Sage, M. Unser, "From Image-Processing Algorithms to ImageJ Plugins: A Student-Friendly Framework," Workshop within the ImageJ User & Developer Conference (IUDC'12), Mondorf-les-Bains, Grand Duchy of Luxembourg, October 24-26, 2012.
- C. Dibner, T. Mannic, D. Sage, S. Lemeille, D. Bosco, P. Salmon, C. Bauer, M. Unser, P. Halban, J. Philippe, "Robust Circadian Clocks Are Ticking in Beta and non-Beta Cells of Human Pancreatic Islets," Diabetologia, vol. 55, suppl. 1, pp. S115, October 2012.
- C. Dibner, T. Mannic, D. Sage, S. Lemeille, D. Bosco, P. Salmon, C. Bauer, M. Unser, P. Halban, J. Philippe, "Robust Circadian Clocks Are Ticking in Beta and non-Beta Cells of Human Pancreatic Islets," Proceedings of the Forty-Eighth Annual Meeting of the European Association for the Study of Diabetes (EASD'12), Berlin, Federal Republic of Germany, October 1-5, 2012, paper no. 259, pp. 110.
- P.O. Michel, R. Delgado-Gonzalo, M. Hubert, L. Baldi, D.L. Hacker, M. Unser, F.M. Wurm, "Assessment of Chromosomal Size Variation in CHO Cells ," Proceedings of the MipTec and BioValley Life Sciences Week (MTBVLS'12), Basel BS, Swiss Confederation, September 24-27, 2012, paper no. P181, pp. 117.
- D. Sage, "Analysis in Live Cell Imaging—ImageJ/Fiji Solutions," Proceedings of the First International Symposium in Applied Bioimaging: Bridging Development and Application (ISAB'12), Porto, Portuguese Republic, September 20-21, 2012, pp. 28.
- D. Wüstner, L.M. Solanko, F.W. Lund, D. Sage, H.J. Schroll, M.A. Lomholt, "Quantitative Fluorescence Loss in Photobleaching for Analysis of Protein Transport and Aggregation," Proceedings of BioImage Informatics 2012 (BII'12), Dresden, Federal Republic of Germany, September 16-19, 2012, pp. 61-62.
- V. Uhlmann, S. Singh, C. Wählby, J. McKinney, A. Carpenter, "Whole Image-Based Classification Using CellProfiler," Proceedings of BioImage Informatics 2012 (BII'12), Dresden, Federal Republic of Germany, September 16-19, 2012, pp. 59-60.
- M. Unser, R. Delgado, "Active Cells: An Exponential Spline Framework for the Interactive Segmentation of Microscopy Images in 2-D and 3-D," Invited talk, Proceedings of BioImage Informatics 2012 (BII'12), Dresden, Federal Republic of Germany, September 16-19, 2012, pp. 43.
- R. Delgado-Gonzalo, M. Unser, "Exponential B-Splines and the Design of Active Contours and Surfaces for Biomedical Image Analysis," Proceedings of the Workshop on New Trends in Subdivision and Related Applications (NTSRA'12), Milano, Italian Republic, September 4-7, 2012, pp. 22.
- M. Unser, "Gaussian
*vs.*Sparse Stochastic Processes: A Unifying Spline-Based Perspective," Proceedings of the Workshop on New Trends in Subdivision and Related Applications (NTSRA'12), Milano, Italian Republic, September 4-7, 2012, pp. 14. - D. Sage, H. Kirshner, T. Pengo, S. Manley, M. Unser, "On the Importance of Simulated Datasets in Localization Microscopy," Second Swiss Single Molecule Localization Microscopy Symposium (SSMLMS'12), Lausanne VD, Swiss Confederation, August 29-31, 2012.
- H. Kirshner, F. Aguet, D. Sage, M. Unser, "Least-Square PSF Fitting for Localization Microscopy," Second Swiss Single Molecule Localization Microscopy Symposium (SSMLMS'12), Lausanne VD, Swiss Confederation, August 29-31, 2012.
- R. Delgado-Gonzalo, N. Chenouard, M. Unser, "Parametric Snakes in Microscopy," Proceedings of the Euro-BioImaging First Workshop on Bioimage Analysis Software: Is There a Future Beyond ImageJ? (WBAS'12), Barcelona, Kingdom of Spain, April 30-May 1, 2012, pp. 28.
- P. Thévenaz, "TurboReg and Other ImageJ Plugins at the Biomedical Imaging Group of EPFL," Proceedings of the Euro-BioImaging First Workshop on Bioimage Analysis Software: Is There a Future Beyond ImageJ? (WBAS'12), Barcelona, Kingdom of Spain, April 30-May 1, 2012, pp. 23.
- T. Mannic, D. Sage, P. Salmon, J. Philippe, M. Unser, P. Halban, D. Bosco, C. Bauer, C. Dibner, "Étude du rôle de l'horloge circadienne dans la fonction de l'îlot pancréatique humain," Actes de la Vingtième réunion des groupes de recherche en endocrinologie, diabétologie et maladies métaboliques des universités de la région Rhône-Alpes (G2L2'12), Lyon, French Republic, March 30, 2012, pp. 39.
- M. Unser, "Towards a Theory of Sparse Stochastic Processes, or when Paul Lévy Joins Forces with Nobert Wiener," Mathematics and Image Analysis 2012 (MIA'12), Paris, French Republic, January 16-18, 2012.

Conference Abstracts • 2011

- P. Wachowicz, D. Schmitter, D. Sage, M. Unser, L. Cerutti, I. Xenarios, V. Simanis, "Determination of Rules Governing Spindle Pole Asymmetry in SIN Signalling," EMBO Conference Series on Centrosomes & Spindle Pole Bodies (CSPD'11), Barcelona, Kingdom of Spain, October 2-6, 2011.
- H. Kirshner, D. Sage, M. Unser, "3D PSF Models for Fluorescence Microscopy in ImageJ," Proceedings of the Twelfth International Conference on Methods and Applications of Fluorescence Spectroscopy, Imaging and Probes (MAF'11), Strasbourg, French Republic, September 11-14, 2011, pp. 154.
- H. Kirshner, T. Pengo, N. Olivier, D. Sage, S. Manley, M. Unser, "Bi-Plane Calibration in Super-Resolution Microscopy," Proceedings of the Twelfth International Conference on Methods and Applications of Fluorescence Spectroscopy, Imaging and Probes (MAF'11), Strasbourg, French Republic, September 11-14, 2011, pp. 153.
- A. Bourquard, M. Unser, "Optically Compressed Image Sensing Using 1-Bit Measurements," Invited talk, Tenth Euro-American Workshop on Information Optics (WIO'11), Benicàssim, Kingdom of Spain, June 19-24, 2011.
- A.J. Kulik, P. Thévenaz, M. Jobin, R. Foschia, K. Lee, J. Lekki, M. Lekka, W. Nowak, E. Bertseva, M. Unser, G. Dietler, "Real-Time Haptic Nanomanipulation in Two and Three Dimensions," Proceedings of the Second European Nanomanipulation Workshop (ENW'11), Tartu, Estonia, June 6-8, 2011, pp. 21.
- I. Guber, Y. Wimmersberger, D. Sage, F. Majo, "A New Imaging Software to Evaluate the Centration of Capsulorhexis and Intraocular Lens (IOL) After Cataract Surgery," Visionary Genomics (ARVO'11), Fort Lauderdale FL, USA, May 1-5, 2011.
- M. Unser, "Stochastic Models for Sparse and Piecewise-Smooth Signals," Schloß Dagstuhl Seminar 11051, Sparse Representations and Efficient Sensing of Data (DS'11), Wadern, Federal Republic of Germany, January 30-February 4, 2011.

Conference Abstracts • 2010

- D. Sage, "PALM Localization and Tracking: ImageJ Software Development," First Swiss Photo Activated Localization Microscopy User Meeting (SPALM'10), Zürich ZH, Swiss Confederation, December 17, 2010.
- D. Sage, "Daniel Sage: Signal-Processing Algorithms for Bioimaging," ImageJ User & Developer Conference 2010 (IUDC'10), Mondorf-les-Bains, Grand Duchy of Luxembourg, October 27-29, 2010.
- M. Unser, "Recent Advances in Biomedical Imaging and Signal Analysis," EURASIP Fellow inaugural lecture, the Eighteenth European Signal Processing Conference (EUSIPCO'10), Ålborg, Kingdom of Denmark, August 23-27, 2010.
- D. Sage, "Signal-Processing Algorithms for Bioimaging," Tutorial, Tenth Biennial Conference, 2010 International Conference on Signal Processing and Communications (SPCOM'10), Bangalore, Republic of India, July 18-21, 2010.
- M. Guerquin-Kern, M. Häberlin, K.P. Pruessmann, M. Unser, "Novel Algorithm for ℓ
_{1}Wavelet-Based MR Image Reconstruction," Joint Annual Meeting of the of the International Society for Magnetic Resonance in Medicine and the European Society for Magnetic Resonance in Medicine and Biology (ISMRM/ESMRMB '10), Stockholm, Sweden, May 1-7, 2010. - M. Unser, A. Bourquard, "Optical Image Reconstruction from Binary Sensors," Proceedings of the SIAM Conference on Imaging Science (SIS'10), Chicago IL, USA, April 12-14, 2010, pp. 90.
- T. Blu, D. Kandaswamy, D. Van De Ville, "Analytic Sensing: A New Approach to Source Imaging and Its Application to EEG," Proceedings of the SIAM Conference on Imaging Science (SIS'10), Chicago IL, USA, April 12-14, 2010, pp. 68.
- M. Unser, "Ten Good Reasons for Using Splines for Signal/Image Proccessing," 2009/2010 CSC/PIMS Distinguished Speaker Series in Applied and Computational Mathematics at Simon Fraser University (DSS-SFU'10), Vancouver BC, Canada, April 9, 2010.

Conference Abstracts • 2009

- R. Delgado-Gonzalo, P. Tafti, C. Rabut, M. Unser, "Fractional Laplacians, Splines, Wavelets, and Fractal Processes," Research Workshop on Subdivision and Refinability 2009 (SR'09), Pontignano, Italian Republic, October 12-15, 2009.
- C. Dibner, D. Sage, M. Unser, T. d'Eysmond, F. Naef, Ü. Schibler, "On the Robustness of the Mammalian Circadian Oscillator: Dissection of Molecular Mechanisms," The 2009 Gordon Conference on Chronobiology: Molecular Mechanisms of Circadian Clocks (GRC'09), Newport RI, USA, July 19-24, 2009.
- M. Unser, "Sampling: 60 Years After Shannon," Plenary talk, Sixteenth International Conference on Digital Signal Processing (DSP'09), Σαντορίνη (Santorini), Ελληνική Δημοκρατία (Hellenic Republic), July 5-7, 2009.
- M. Unser, "Steerable Wavelet Frames in
*L*_{2}(ℝ^{D})," Proceedings of the International Conference on Wavelets and Applications (ICWA'09), Saint-Petersburg, Russia, June 14-20, 2009, pp. 61-62. - M. Unser, C. Vonesch, M. Guerquin-Kern, D. Van De Ville, "Fast Multi-Level Reconstruction of Biomedical Images Using Wavelet Sparsity Constraints," Approximation and Optimization in Image Restoration and Reconstruction (AOIRR'09), Île de Porquerolles, French Republic, June 8-12, 2009.
- D. Van De Ville, I. Khalidov, J. Fadili, J. Verhaeghe, M. Unser, "Wavelets Tailored to Functional Imaging: Applications to fMRI and Dynamic PET," Approximation and Optimization in Image Restoration and Reconstruction (AOIRR'09), Île de Porquerolles, French Republic, June 8-12, 2009.
- M. Unser, "Wavelets and Differential Operators: From Fractals to Marr's Primal Sketch," Plenary talk, Proceedings of the Fourth French Biyearly Congress on Applied and Industrial Mathematics (SMAI'09), La Colle sur Loup, French Republic, May 25-29, 2009, pp. 8.
- L. Nguyen, D. Sage, S. Kayal, D. Jeanbourquin, L. Rossi, "A Vision-Based Tool for the Control of Hydraulic Structures in Sewer System," European Geosciences Union General Assembly 2009, Wien, Republic of Austria, April 19-24, 2009.
- A.J. Kulik, J. Lekki, M. Lekka, E. Bertseva, A.S.G. Singh, P. Thévenaz, S. Puttini, S. Jeney, W. Nowak, G. Dietler, M. Unser, L. Forró, "Intracellular 3-D Interactive Nanomanipulator," Proceedings of the Eleventh Annual Linz Winter Workshop, Advances in Single-Molecule Research for Biology & Nanoscience (ALWW'09), Linz, Republic of Austria, February 6-9, 2008, pp. 14.
- M. Unser, "Wavelet Techniques for Advanced Biomedical Image Reconstruction," Minicourse on Mathematics of Emerging Biomedical Imaging III, Paris, French Republic, February 4-6, 2009.
- M. Unser, "A Guided Tour of Splines for Medical Imaging," Minicourse on Mathematics of Emerging Biomedical Imaging III, Paris, French Republic, February 4-6, 2009.
- M. Unser, "The Colored Revolution of Bio-Imaging: An Introduction to Fluorescence Microscopy," Minicourse on Mathematics of Emerging Biomedical Imaging III, Paris, French Republic, February 4-6, 2009.

Conference Abstracts • 2008

- M. Unser, "Wavelets and Advanced Biomedical Imaging," Plenary talk, Tenth International Conference on Control, Automation, Robotics and Vision (ICARCV'2008), Hanoi, Vietnam, December 17-20, 2008.
- M. Unser, "Wavelets and Differential Operators: From Fractals to Marr's Primal Sketch," Plenary talk, Sixth Indian Conference on Computer Vision, Graphics & Image Processing (ICCVGIP'08), Bhubaneswar, Republic of India, December 16-19, 2008.
- D. Wüstner, A.L. Larsen, J.R. Brewer, D. Sage, N.J. Færgeman, "Selective Visualization of Fluorescent Sterols in
*Caenorhabditis elegans*," Proceedings of the Forty-Ninth International Conference on the Bioscience of Lipids (ICBL'08), Maastricht, Kingdom of the Netherlands, August 26-30, 2008, Chemistry and Physics of Lipids, vol. 154, supp. 1, pp. S42, August 2008. - M. Unser, "Self-Similarity, Fractal Models and Spline Approximation," Proceedings of the 2008 International Workshop on Local and Non-Local Approximation in Image Processing (LNLA'08), Lausanne VD, Swiss Confederation, August 23-24, 2008, pp. 1.
- D. Sage, "Tracking Particles in Live Cell Imaging: ImageJ Solutions," Proceedings of the Sixth FENS Forum of European Neuroscience (FENS-EN'08), Geneva GE, Swiss Confederation, July 12-16, 2008, FENS Abstracts, vol. 4, pp. 003.4.
- M. Unser, "A Guided Tour of Splines for Medical Imaging," Invited talk, Proceedings of the Twelfth Annual Conference on Medical Image Understanding and Analysis (MIUA'08), Dundee, United Kingdom, July 2-3, 2008, pp. 119-120.
- M. Unser, "The Hilbert-Riesz Wavelet Transform and the Multiresolution Analysis of Fringe Patterns," Seventh Workshop on Information Optics (WIO'08), Annecy, French Republic, June 1-5, 2008.
- A. Griffa, T. Laroche, J. Artacho, J.-C.F. Sarria, D. Sage, N. Garin, "Development of Image-Analysis Tools in the BioImaging and Optics Platform (BIOp)," Proceedings of the Eighth European Light Microscopy Initiative Meeting (ELMI'08), Davos GR, Swiss Confederation, May 27-30, 2008, pp. 82.
- M. Unser, "Advanced Image Processing and Analysis Using ImageJ," Proceedings of the Eighth European Light Microscopy Initiative Meeting (ELMI'08), Davos GR, Swiss Confederation, May 27-30, 2008, pp. 34.
- A.J. Kulik, M. Lekka, J. Lekki, E. Bertseva, P. Thévenaz, A. Singh, S. Jeney, M. Unser, L. Forró, "Intracellular Manipulation Using Optical Tweezers," Tenth School on Acousto-Optics and Applications (AOA'08), Gdańsk-Sopot, Poland, May 12-15, 2008.
- M. Unser, "Splines and Optimal Signal Reconstruction," Invited tutorial, Meeting on "Information, Signal, Images et ViSion: Thème A—Traitement Statistique de l'Information [Échantillonnage Irrégulier]" (ISIS-A-EI'08), Paris, French Republic, April 18, 2008.
- M. Unser, "Ten Good Reasons for Using Splines for Signal/Image Processing," Invited talk, Journée "Approximation et Modélisation Géométrique" (SMAI-AFA'08), Paris, French Republic, March 14, 2008.
- M. Unser, "Splines: A Unifying Framework for Signal and Image Processing," Plenary talk, Fifth IASTED International Conference on Signal Processing, Pattern Recognition, and Applications (SPPRA'08), Innsbruck, Republic of Austria, February 13-15, 2008.
- T. Lasser, D. Van De Ville, E.J. Martin-Williams, M. Leutenegger, R. Leitgeb, A. Lopez, M. Unser, A. Szelényi, E. Hattingen, R. Gerlach, V. Seifert, C. Hauger, A. Raabe, "Laser Doppler Imaging Opens New Perspectives for Intra-Operative Brain Mapping," Proceedings of the Fortieth Annual Meeting of the Union of Swiss Societies for Experimental Biology (USGEB'08), Lausanne VD, Swiss Confederation, February 6-7, 2008, pp. 118.
- B. Rappaz, D. Van De Ville, S. Kasas, C. Depeursinge, P. Magistretti, P. Marquet, "Nanometric Cell Membrane Fluctuations Assessed with Digital Holographic Microscopy," Proceedings of the Fortieth Annual Meeting of the Union of Swiss Societies for Experimental Biology (USGEB'08), Lausanne VD, Swiss Confederation, February 6-7, 2008, pp. 102.
- G. Azarias, D. Van De Ville, M. Unser, J.-Y. Chatton, "Spontaneous Na+ Transients in Individual Mitochondria of Intact Astrocytes," Proceedings of the Fortieth Annual Meeting of the Union of Swiss Societies for Experimental Biology (USGEB'08), Lausanne VD, Swiss Confederation, February 6-7, 2008, pp. 39.
- M. Ivancevic, J.-L. Daire, M. Kocher, A. Righetti, D. Didier, J.-P. Vallée, "Effect of the Bolus Size on the Quantification of Myocardial Perfusion Using MRI," Proceedings of the SCMR Eleventh Annual Scientific Sessions (SCMR'08), Los Angeles CA, USA, February 1-3, 2008, pp. 421-422.
- M. Unser, "Wavelet Methods for Advanced Image Processing and Reconstruction," CIMST Symposium "Imaging: Pushing the Limits in Bio-medical Research" (CIMST'08), Zürich ZH, Swiss Confederation, January 22, 2008.
- M. Unser, "Beyond the Digital Divide or Ten Good Reasons for Using Splines," Israel Pollak Distinguished Lecture Series (IPDLS'08), Technion, Department of Electrical Engineering, Haifa, Israel, January 13-17, 2008.
- M. Unser, "Wavelets Demystified with Applications to Bioimaging," Israel Pollak Distinguished Lecture Series (IPDLS'08), Technion, Department of Electrical Engineering, Haifa, Israel, January 13-17, 2008.
- M. Unser, "Sampling and Approximation Theory," Israel Pollak Distinguished Lecture Series (IPDLS'08), Technion, Department of Electrical Engineering, Haifa, Israel, January 13-17, 2008.

Conference Abstracts • 2007

- M. Unser, "Recent Advances in Biomedical Image Reconstruction," Plenary talk, Second International Workshop on Computational Advances in Multi-Sensor Adaptive Processing (CAMSAP'07), St. Thomas, U.S. Virgin Islands, December 12-14, 2007.
- M. Unser, "Wavelets Demystified," Plenary talk, Proceedings of the Summer School "New Trends and Directions in Harmonic Analysis, Approximation Theory, and Image Analysis," Inzell, Federal Republic of Germany, September 17-21, 2007, pp. 15-16.
- M. Unser, "Sampling and Approximation Theory," Plenary talk, Proceedings of the Summer School "New Trends and Directions in Harmonic Analysis, Approximation Theory, and Image Analysis," Inzell, Federal Republic of Germany, September 17-21, 2007, pp. 15.
- F. Aguet, D. Van De Ville, M. Unser, "A Model-Based Approach to Extended Depth of Field for Brightfield Microscopy," Max Anliker memorial poster award, Proceedings of the 2007 Annual Meeting of the Swiss Society of Biomedical Engineering (SSBE'07), Neuchâtel NE, Swiss Confederation, September 13-14, 2007, pp. 8.
- C. Vonesch, M. Unser, "Fast Wavelet-based Deconvolution of Fluorescence Micrographs," Proceedings of the 2007 Annual Meeting of the Swiss Society of Biomedical Engineering (SSBE'07), Neuchâtel NE, Swiss Confederation, September 13-14, 2007, pp. 6-7.
- M. Unser, "Spline and High-Quality Image Registration," Series of Invited Lectures, 2007 Annual Meeting of the Swiss Society of Biomedical Engineering (SSBE'07), Neuchâtel NE, Swiss Confederation, September 13-14, 2007.
- M. Unser, P.D. Tafti, D. Van De Ville, "Affine Invariance, Splines, Wavelets and Fractional Brownian Fields," Mathematical Image Processing Meeting (MIPM'07), Marseille, French Republic, September 3-7, 2007.
- M. Unser, "Unifying Formulation of Continuous/Discrete Signal Processing," Series of Invited Lectures, Information Engineering Department, University of Siena, Italian Republic, July 23-27, 2007.
- D. Van De Ville, M. Seghier, F. Lazeyras, T. Blu, M. Unser, "Empirical Sensitivity, Specificity, and Bias of Wavelet-Based Statistical Parametric Mapping (WSPM)," Proceedings of the Thirteenth Annual Meeting of the Organization for Human Brain Mapping (HBM'07), Chicago IL, USA, June 10-14, 2007, paper no. 336 TH-PM.
- M. Unser, "Splines, Noise, Fractals and Optimal Signal Reconstruction," Plenary talk, Seventh International Workshop on Sampling Theory and Applications (SampTA'07), Θεσσαλονίκη (Thessaloniki), Ελληνική Δημοκρατία (Hellenic Republic), June 1-5, 2007.
- C. Dibner, D. Sage, Ü. Schibler, M. Unser, "Robust Image Processing Techniques for Tracking and Cell Shape Outlining: Application to Mammalian Circadian Behaviour of Cells," Basel Computational Biology Conference, From Euler to Computational Biology: Integrating Mathematics into Biological Research (USGEB/[BC]
^{2}'07), Basel BS, Swiss Confederation, March 13-14, 2007. - F. Aguet, D. Van De Ville, M. Unser, "Extended Depth of Field and Specimen Topography Estimation in Brightfield Microscopy," Proceedings of the CHUV Research Day (CHUV'07), Lausanne VD, Swiss Confederation, February 1, 2007, pp. 226.
- G. Azarias, D. Van De Ville, M. Unser, J. Chatton, "Spontaneous Na
^{+}Concentration Transients in Individual Mitochondria of Intact Astrocytes," Proceedings of the CHUV Research Day (CHUV'07), Lausanne VD, Swiss Confederation, February 1, 2007, pp. 194. - I. Khalidov, D. Van De Ville, M. Jacob, F. Lazeyras, M. Unser, "BSLIM: Spectral Localization by Imaging with Explicit B0 Field Inhomogeneity Compensation," Proceedings of the CHUV Research Day (CHUV'07), Lausanne VD, Swiss Confederation, February 1, 2007, pp. 191.
- D. Van De Ville, M. Seghier, F. Lazeyras, T. Blu, M. Unser, "Wavelet-Based Statistical Analysis of fMRI Data with High Spatial Resolution," Proceedings of the CHUV Research Day (CHUV'07), Lausanne VD, Swiss Confederation, February 1, 2007, pp. 185.
- M. Bach Cuadra, B. Mortamet, F. Budin, D. Van De Ville, R. Meuli, J.-P. Thiran, "Morphometric Statistical Method for the Early Detection of Brain Degeneration in MR Imaging," Proceedings of the CHUV Research Day (CHUV'07), Lausanne VD, Swiss Confederation, February 1, 2007, pp. 148.

Conference Abstracts • 2006

- D. Van De Ville, T. Blu, B. Forster, M. Unser, "Polyharmonic B-Spline Wavelets: From Isotropy to Directionality," Invited talk, Advanced Concepts for Intelligent Vision Systems (ACIVS'06), Antwerp, Kingdom of Belgium, September 18-21, 2006.
- G. Azarias, D. Van De Ville, M. Unser, J.Y. Chatton, "Spontaneous Na
^{+}Concentration Transients in Individual Mitochondria of Intact Astrocytes," Proceedings of the Lemanic-Neurosciences Annual Meeting (Diablerets'06), Les Diablerets VD, Swiss Confederation, September 8-9, 2006, pp. 58. - M. Unser, "The Colored Revolution of Bio-Imaging: New Opportunities for Signal Processing," Tutorial, Fourteenth European Signal Processing Conference (EUSIPCO'06), Firenze, Italian Republic, September 5-8, 2006.
- I. Khalidov, C. Vonesch, "Wavelet Bases Revisited," Wavelets and Applications Conference (WavE'06), Lausanne VD, Swiss Confederation, July 10-14, 2006.
- D. Van De Ville, M. Seghier, F. Lazeyras, M. Pelizzone, T. Blu, M. Unser, "SPM
*versus*WSPM: Sensitivity and Specificity for Multi-Session fMRI Data," Invited talk, Proceedings of the Twelfth Annual Meeting of the Organization for Human Brain Mapping (HBM'06), Firenze, Italian Republic, June 11-15, 2006, pp. S94. - R.S. Patel, D. Van De Ville, F. DuBois Bowman, "Determining Significant Connectivity by 4D Spatiotemporal Wavelet Packet Resampling of Functional Neuroimaging Data," Proceedings of the Twelfth Annual Meeting of the Organization for Human Brain Mapping (HBM'06), Firenze, Italian Republic, June 11-15, 2006, pp. S42.
- M. Unser, "Sampling and Interpolation for Biomedical Imaging," Tutorial, Third IEEE International Symposium on Biomedical Imaging: From Nano to Macro (ISBI'06), Arlington VA, USA, April 6-9, 2006.

Conference Abstracts • 2005

- T. Möller, A. Entezari, J. Morey, K. Mueller, V. Ostromoukhov, D. Van De Ville, "Point Lattices in Computer Graphics and Visualization," Tutorial, IEEE Visualization 2005 (VIS'05), Minneapolis MN, USA, October 23-28, 2005.
- M. Unser, "Splines: A Unifying Framework for Image Processing," Plenary talk, 2005 Twelfth IEEE International Conference on Image Processing (ICIP'05), Genova, Italian Republic, September 11-14, 2005.
- M. Unser, "Vers une théorie unificatrice pour le traitement numérique/analogique des signaux," Plenary talk, Proceedings of the Twentieth GRETSI Symposium on Signal and Image Processing (GRETSI'05), Louvain-la-Neuve, Kingdom of Belgium, September 6-9, 2005, pp. 557-558.
- I. Mallabiabarrena, C. Prud′homme, A. Radaelli, V. Rigamonti, D. Sage, "From Medical Images to Numerical Blood Flow Simulations in Human Vessels," Proceedings of the 2005 Annual Meeting of the Swiss Society for Biomedical Engineering (SSBE'05), Lausanne VD, Swiss Confederation, September 1-2, 2005, pp. F21.
- I. Khalidov, D. Van De Ville, M. Jacob, F. Lazeyras, M. Unser, "Magnetic Resonance Spectroscopy Imaging with Field Inhomogeneity Compensation," Proceedings of the 2005 Annual Meeting of the Swiss Society for Biomedical Engineering (SSBE'05), Lausanne VD, Swiss Confederation, September 1-2, 2005, pp. F12.
- A. Beuchat, C.O.S. Sorzano, D. Sage, A. Senn, F. Urner, M. Unser, "Multivariate Statistical Analysis and Classification of Zygotes," Proceedings of the 2005 Annual Meeting of the Swiss Society for Biomedical Engineering (SSBE'05), Lausanne VD, Swiss Confederation, September 1-2, 2005, pp. F04.
- F. Aguet, D. Van De Ville, M. Unser, "Maximum-Likelihood Based Tracking of Fluorescent Nanoparticles," Proceedings of the 2005 Annual Meeting of the Swiss Society for Biomedical Engineering (SSBE'05), Lausanne VD, Swiss Confederation, September 1-2, 2005, pp. F01.
- B. Forster, D. Van De Ville, J. Berent, N. Quack, D. Sage, M. Unser, "Wavelets for Extended Depth-of-Field in Light Microscopy: Image Fusion and 3D Visualization," Sixth European Conference on Mathematical and Theoretical Biology (ECMTB'05), Dresden, Federal Republic of Germany, July 18-22, 2005.
- M. Unser, "Self-Similarity: From Fractals to Splines," Invited talk, Proceedings of the International Conference on Algorithms for Approximation V (A4A5'05), Chester, United Kingdom, July 18-22, 2005, pp. 13.
- D. Van De Ville, T. Blu, M. Unser, "WSPM: A New Approach for Wavelet-Based Statistical Analysis of fMRI Data," Proceedings of the Eleventh Annual Meeting of the Organization for Human Brain Mapping (HBM'05), Toronto ON, Canada, June 12-16, 2005, pp. S17.
- M. Unser, "Splines: On Scale, Differential Operators, and Fast Algorithms," Plenary talk, Fifth International Conference on Scale Space and PDE Methods in Computer Vision, Hofgeismar, Federal Republic of Germany, April 6-10, 2005.
- M. Unser, "Recent Advances in Image Processing for Bio-Photonics," Eleventh SSOM Engelberg Lectures on Optics (SSOM'05), Engelberg OW, Swiss Confederation, March 6-10, 2005.
- S. Jonić, C.O.S. Sorzano, P. Thévenaz, M. Unser, N. Boisset, "Spline-Based Approach to Orientation Assignment for Three-Dimensional Electron Microscopy," Actes du deuxième symposium sur l'imagerie pour les sciences du vivant et la médecine (IMVIE
^{2}'05), Strasbourg, French Republic, March 1-3, 2005, pp. 40-42.

Conference Abstracts • 2004

- M. Unser, "Think Analog, Act Digital," Plenary talk, Seventh Biennial Conference, 2004 International Conference on Signal Processing and Communications (SPCOM'04), Bangalore, Republic of India, December 11-14, 2004.
- M. Unser, "Medical Image Interpolation—The Quest for Higher Quality," Plenary talk, Proceedings of the 2004 IEEE Nuclear Science Symposium, Medical Imaging Conference, Fourteenth International Workshop on Room-Temperature Semiconductor x- and Gamma- Ray Detectors, Special Focus Workshop (Sensing, Control and Readout of Gravitational Wave Detectors), Special Focus Workshop (Synchrotron Radiation Detectors), 2004 Workshop on the Nuclear Radiology of Breast Cancer (NSS/MIC/RTSD'04), Roma, Italian Republic, October 16-22, 2004, pp. 130.
- M.K. Ivancevic, P. Thévenaz, A.G. Somsen, A. Righetti, D. Didier, J. Vallée, "Parametric Map of Myocardial Perfusion," Proceedings of the Twenty-First Annual Meeting of the European Society for Magnetic Resonance in Medicine and Biology (ESMRBM'04), Copenhagen, Kingdom of Denmark, September 9-12, 2004, pp. 528.
- M. Unser, "Advanced Bio-Imaging: The Impact of Mathematics and Signal Processing," Plenary talk, Fifth Caesarium, Advances in Biomedicine, Internationale Tagung des Forschungszentrums Caesar (CAESAR'04), Bonn, Federal Republic of Germany, September 6-8, 2004.
- M. Unser, "Fractals, Wavelets and Medical Image Analysis," Plenary talk, 2004 Annual Meeting of the Swiss Society of Biomedical Engineering (SSBE'04), Zürich ZH, Swiss Confederation, September 2-3, 2004.
- D. Sage, M. Unser, "Automated Tracking of Single Fluorescence Particle," Proceedings of the 2004 Annual Meeting of the Swiss Society of Biomedical Engineering (SSBE'04), Zürich ZH, Swiss Confederation, September 2-3, 2004, poster no. 55.
- M. Arigovindan, M. Sühling, C. Jansen, P. Hunziker, M. Unser, "Bimodal Ultrasound Motion Recovery from Incomplete Data," Proceedings of the 2004 Annual Meeting of the Swiss Society of Biomedical Engineering (SSBE'04), Zürich ZH, Swiss Confederation, September 2-3, 2004, poster no. 47.
- B. Forster, D. Van De Ville, J. Berent, N. Quack, D. Sage, M. Unser, "Extended Depth-of-Field for Color Images in Light Microscopy: Image Fusion and 3D Visualization," Max Anliker memorial poster award, Proceedings of the 2004 Annual Meeting of the Swiss Society of Biomedical Engineering (SSBE'04), Zürich ZH, Swiss Confederation, September 2-3, 2004, poster 38.
- F. Aguet, D. Van De Ville, M. Unser, "On the Fundamental Limits of Nano-Particle Tracking Along the Optical Axis," Proceedings of the 2004 Annual Meeting of the Swiss Society of Biomedical Engineering (SSBE'04), Zürich ZH, Swiss Confederation, September 2-3, 2004, poster no. 30.
- R.V.V.L. Langoju, T. Blu, M. Unser, "Resolution Enhancement in Opticl Coherence Tomography," Proceedings of the 2004 Annual Meeting of the Swiss Society of Biomedical Engineering (SSBE'04), Zürich ZH, Swiss Confederation, September 2-3, 2004, poster no. 15.
- S. Tirosh, D. Van De Ville, M. Unser, "Optimal Wiener Filtering for fMRI Images with Polyharmonic Smoothing Splines," Proceedings of the 2004 Annual Meeting of the Swiss Society of Biomedical Engineering (SSBE'04), Zürich ZH, Swiss Confederation, September 2-3, 2004, poster no. 5.
- C.O.S. Sorzano, S. Jonić, C. El-Bez, S. De Carlo, P. Thévenaz, J. Conway, B.L. Trus, M. Unser, "Volumetric Spectral Signal-To-Noise Ratio," Proceedings of the Thirteenth European Microscopy Congress (EMC'04), Antwerp, Kingdom of Belgium, August 22-27, 2004, vol. I (Instrumentation and Methodology), pp. 427-428.
- M. Unser, "Bio-Imaging and Mathematics: The Example of Splines," Plenary talk, Workshop Bio-Imaging, Neuherberg, Federal Republic of Germany, June 3-4, 2004.
- M. Sühling, C.H.P. Jansen, S.V. Aschkenasy, P. Buser, S. Marsch, M. Unser, P.R. Hunziker, "Vector Motion Analysis for Objective, Quantitative Analysis of Echocardiograms: First Large-Scale Clinical Validation in 100 Patients," Gemeinsame Jahrestagung der Schweizerischen Gesellschaft für Kardiologie, der Schweizerischen Gesellschaft für Angiologie, Basel BS, Swiss Confederation, June 2-4, 2004, vol. 7, supp. 6, pp. 26 S.
- B. Forster, T. Blu, M. Unser, "Complex B-Splines and Wavelets," Second International Conference on Computational Harmonic Analysis, Nineteenth Annual Shanks Lecture (CHA'04), Nashville TN, USA, May 24-30, 2004.
- M. Unser, T. Blu, "A Unifying Spline Formulation for Stochastic Signal Processing [Or How Schoenberg Meets Wiener, with the Help of Tikhonov]," Plenary talk, Second International Conference on Computational Harmonic Analysis, Nineteenth Annual Shanks Lecture (CHA'04), Nashville TN, USA, May 24-30, 2004.
- D. Van De Ville, T. Blu, M. Unser, "WSPM: Wavelet Processing and the Analysis of fMRI Using Statistical Parametric Maps," Invited talk, Second International Conference on Computational Harmonic Analysis, Nineteenth Annual Shanks Lecture (CHA'04), Nashville TN, USA, May 24-30, 2004.
- M. Unser, "Fractals, Wavelets, and Medical Image Analysis," Plenary talk, Computer Vision Approaches to Medical Image Analysis (CVAMIA'04) and Mathematical Methods in Biomedical Image Analysis (MMBIA'04) Workshops, Prague, Czech Republic, May 15, 2004.

Conference Abstracts • 2003

- E. Meijering, M. Jacob, J.-C.F. Sarria, P. Steiner, H. Hirling, M. Unser, "Neurite Tracing and Analysis in Fluorescence Microscopy Images Using Improved Ridge Detection and Graph Searching," Fall Meeting of the Dutch Society for Pattern Recognition and Image Processing (NVPHBV'03), Best, Kingdom of the Netherlands, November 27, 2003.
- J. Berent, B. Forster, D. Van De Ville, D. Sage, M. Unser, "Extended Depth-of-Focus for Color Images in Bright-Field Microscopy," Autumn Meeting of the Swiss Society of Pharmacology and Toxicology: Imaging Technologies and Their Applications in Pharmacology and Toxicology (ITAPT'03), Basel BS, Swiss Confederation, October 27-28, 2003.
- D. Sage, M. Unser, "Automatic Tracking of Particles in Dynamic Fluorescence Microscopy," Autumn Meeting of the Swiss Society of Pharmacology and Toxicology: Imaging Technologies and Their Applications in Pharmacology and Toxicology (ITAPT'03), Basel BS, Swiss Confederation, October 27-28, 2003.
- P. Thévenaz, M. Unser, "Registration Algorithms for Time-Lapse Sequences and Multimodality Imaging," Autumn Meeting of the Swiss Society of Pharmacology and Toxicology: Imaging Technologies and Their Applications in Pharmacology and Toxicology (ITAPT'03), Basel BS, Swiss Confederation, October 27-28, 2003.
- M. Sühling, M. Unser, C. Jansen, M. Arigovindan, P. Buser, S. Marsch, P.R. Hunziker, "Exploring the Complexity of Cardiac Motion by Multiscale Motion Mapping, a Novel Quantitative Echocardiograpic Technique," Proceedings of the Twenty-Fifth Annual Congress of the European Society of Cardiology (ESC'03), Wien, Republic of Austria, August 30-September 2, 2003, European Heart Journal, vol. 24, abstr. supp. 1, pp. 376, August-September 2003.
- M. Unser, "Lectures on Splines and Wavelets," Series of Invited Lectures, Information Engineering Department, University of Siena, Italian Republic, July 14-18, 2003.
- C. Dornier, M.K. Ivancevic, P. Thévenaz, M. Unser, J. Vallée, "Accurate MR Cardiac Perfusion Analysis by Using a Multiresolution B-Splines Registration Algorithm," Proceedings of the Eleventh Scientific Meeting of the International Society for Magnetic Resonance in Medicine (ISMRM'03), Toronto ON, Canada, July 10-16, 2003, pp. 700.
- M. Unser, T. Blu, "The Spline Foundation of Wavelet Theory," Plenary talk, Proceedings of the International Conference on Wavelets and Splines (EIMI-WS'03), Saint Petersburg, Russia, July 3-8, 2003, pp. 98-99.
- C.Ó.S. Sorzano, "Angular Assignment Using the Visible Space and a Fast Wavelet Based Correlation," First Joint International Meeting Between the American Mathematical Society and the Real Sociedad Matemática Española (RMSE-AMS'03), Sevilla, Kingdom of Spain, June 18-21, 2003.
- E. Meijering, M. Jacob, J.-C.F. Sarria, P. Steiner, H. Hirling, M. Unser, "A Novel Tool for Neurite Tracing and Analysis in Fluorescence Microscopy," Proceedings of the EMBO Workshop on Advanced Light Microscopy, Third International Meeting of the European Light Microscopy Initiative (ELMI'03), Barcelona, Kingdom of Spain, June 11-13, 2003, pp. 6.
- C. Depeursinge, , T. Colomb, P. Massatch, A. Marian, F. Montfort, M. Liebling, T. Blu, M. Unser, P. Marquet, P.J. Magistretti, "Digital Holography Applied to Microscopy: A New Imaging Modality in the Sub-Wavelength Range," Hundertvierte Jahrestagung der Deutschen Gesellschaft für angewandte Optik (DGaO), Münster, Federal Republic of Germany, June 10-14, 2003.
- P. Hunziker, M. Sühling, M. Arigovindan, C.H.P. Jansen, A. Linka, P. Buser, S. Marsch, M. Unser, "Exploring the Complexity of Cardiac Motion by Multiscale Motion Mapping," Menarini prize for echocardiography of the Working Group for Echocardiography of the Swiss Society of Cardiology, Actes de l'assemblée annuelle commune, Société Suisse de Cardiologie, Société Suisse de Chirurgie Thoracique et Cardio-Vasculaire, Société Suisse de Médecine Intensive, Lausanne VD, Swiss Confederation, May 8-10, 2003, vol. 6, supp. 5, pp. 17 S.
- M. Sühling, M. Arigovindan, C.H.P. Jansen, A. Linka, P. Buser, C. Heidegger, S. Marsch, P. Hunziker, M. Unser, "Direct Measurement of Myocardial Thickening by Means of Computer Vision," Menarini prize for echocardiography of the Working Group for Echocardiography of the Swiss Society of Cardiology, Actes de l'assemblée annuelle commune, Société Suisse de Cardiologie, Société Suisse de Chirurgie Thoracique et Cardio-Vasculaire, Société Suisse de Médecine Intensive, Lausanne VD, Swiss Confederation, May 8-10, 2003, vol. 6, supp. 5, pp. 16 S.
- C.H. Jansen, M. Arigovindan, M. Sühling, M. Unser, S. Marsch, P. Hunziker, "Computer Vision in Echocardiography: Observer-Independent, Autonomous Echo Analysis Using Wavelet Footprints," Proceedings of the Fifty-Second Annual Scientific Session of the American College of Cardiology (ACC'03), Chicago IL, USA, March 30-April 2, 2003, Journal of the American College of Cardiology, vol. 41, no. 6, supp. 2, pp. 538A, March 19, 2003.
- C.H. Jansen, M. Sühling, M. Arigovindan, S. Marsch, M. Unser, P. Hunziker, "True 2-D Velocity Display by Multiscale Motion Mapping (Triple-M Imaging) Allows New Insights into Complex Cardiac Motion Patterns," Proceedings of the Fifty-Second Annual Scientific Session of the American College of Cardiology (ACC'03), Chicago IL, USA, March 30-April 2, 2003, Journal of the American College of Cardiology, vol. 41, no. 6, supp. 2, pp. 455A-456A, March 19, 2003.
- C.H. Jansen, L. Zeng, M. Arigovindan, M. Sühling, S. Marsch, P.R. Hunziker, "Wavelet-
*versus*JPEG Compression of Echocardiograms," Proceedings of the Fifty-Second Annual Scientific Session of the American College of Cardiology (ACC'03), Chicago IL, USA, March 30-April 2, 2003, Journal of the American College of Cardiology, vol. 41, no. 6, supp. 2, pp. 449A, March 19, 2003. - C.H. Jansen, M. Sühling, M. Arigovindan, M. Unser, P.T. Buser, P. Hunziker, "Multiscale Motion Mapping (Triple-M Imaging) for Color-Coded Analysis of Stress Echocardiograms," Proceedings of the Fifty-Second Annual Scientific Session of the American College of Cardiology (ACC'03), Chicago IL, USA, March 30-April 2, 2003, Journal of the American College of Cardiology, vol. 41, no. 6, supp. 2, pp. 426A, March 19, 2003.
- M. Liebling, "Algorithmic Aspects of Tomographic Reconstruction from Parallel and Diffracted Projections," Invited talk, Second Korean-Swiss Workshop on Novel Coherence-Based Radiology Techniques, Jeju-do, Republic of Korea, February 19-22, 2003.

Conference Abstracts • 2002

- C. Jansen, M. Sühling, M. Arigovindan, P. Buser, M. Unser, P. Hunziker, "Multiscale Motion Mapping (“Triple-M Imaging”): A Novel Echo Imaging Mode Featuring Quantitative Echo Motion Display Independent from Borders and Doppler," Young investigator award of the Working Group on Echocardiography of the European Society of Cardiology, Proceedings of the Sixth Annual and Plenary Meeting of the Working Group on Echocardiography of the European Society of Cardiology (EUROECHO6'02), Münich, Federal Republic of Germany, December 4-7, 2002, European Journal of Echocardiography, vol. 3, supp. 1, pp. 122, December 2002.
- M. Unser, D. Sage, M. Jacob, E. Meijering, P. Thévenaz, "Image Processing and Analysis of Biological Images," Live Cell Imaging Workshop, Lausanne VD, Swiss Confederation, October 9-10, 2002.
- C. Dornier, M.K. Ivancevic, P. Thévenaz, J. Vallée, "Improvement of the Perfusion Analysis by Registration of MRI Images Sequence," Proceedings of the Nineteenth Annual Scientific Meeting of the European Society for Magnetic Resonance in Medicine and Biology (ESMRMB'02), Cannes, French Republic, August 22-25, 2002, published in
*MAGMA Magnetic Resonance Materials in Physics, Biology and Medicine*, vol. 15, sup. 1, pp. 105, August 2002. - T. Blu, M. Unser, P. Thévenaz, "Optimizing Basis Functions for Best Approximation," Fifth International Conference on Curves and Surfaces (ICCS'02), Saint Malo, French Republic, June 27-July 3, 2002.
- M. Unser, "Generalized Sampling and Constrained Landmark Interpolation," Proceedings of the First 2002 SIAM Conference on Imaging Science (SIAG-IS'02), Boston MA, USA, March 4-6, 2002, Session MS17, pp. 45.
- M. Unser, T. Blu, "Fractional Wavelets: Properties and Applications," Proceedings of the First 2002 SIAM Conference on Imaging Science (SIAG-IS'02), Boston MA, USA, March 4-6, 2002, Session MS1, pp. 33.
- M. Unser, "Wavelets and Image Processing," Special Session of the First 2002 SIAM Conference on Imaging Science (SIAG-IS'02), Boston MA, USA, March 4-6, 2002, Session MS1/MS8, pp. 32-33/37-38.

Conference Abstracts • 2001

- M. Unser, "Sampling: Beyond the Myth of a Perfect Reconstruction," Plenary talk, Proceedings of the Fourth International Conference on Sampling Theory and Applications (SampTA'01), Orlando FL, USA, May 13-17, 2001, pp. 15.
- M. Unser, T. Blu, "Fractional Splines and Wavelets: From Theory to Applications," Joint IDR-IMA Workshop: Ideal Data Representation, Minneapolis MN, USA, April 9-13, 2001.
- M. Unser, "Splines and Wavelets for Biomedical Imaging," Series of Invited Lectures, Workshop on Fractals and Wavelets in Medical Imaging, Centre de Recherches Mathématiques, Université de Montréal, Montréal QC, Canada, February 23-24, 2001.
- T. Blu, M. Sühling, P. Thévenaz, M. Unser, "Approximation Order: Why the Asymptotic Constant Matters," Proceedings of the Second Pacific Rim Conference on Mathematics, Taipei, Taiwan (People's Republic of China), January 4-8, 2001, pp. II.3-II.4.

Conference Abstracts • 2000

- M. Unser, "Splines: A Perfect Fit for Signal Processing," Plenary talk, Tenth European Signal Processing Conference (EUSIPCO'00), Tampere, Republic of Finland, September 4-8, 2000.
- M. Unser, "Wavelets and Applications," Series of Invited Lectures, Information Engineering Department, University of Siena, Italian Republic, July 5-7, 2000.

Conference Abstracts • 1998

- T. Blu, M. Unser, "A Quantitative Fourier Analysis of the Linear Approximation Error by Wavelets," Wavelet Applications Workshop, Monte Verità TI, Swiss Confederation, September 28-October 2, 1998.
- S. Horbelt, M. Vetterli, M. Unser, "High-Quality Wavelet Splatting for Volume Rendering," Wavelet Applications Workshop, Monte Verità TI, Swiss Confederation, September 28-October 2, 1998.
- M. Unser, T. Blu, "Spline Wavelets with Fractional Order of Approximation," Wavelet Applications Workshop, Monte Verità TI, Swiss Confederation, September 28-October 2, 1998.
- M. Unser, "Wavelet Analysis of Functional Images of the Brain," The 1998 Workshop on Spectral Methods in Medical Signal Processing, Institute for Biomathematics and Biometry, Neuherberg, Federal Republic of Germany, February 25-28, 1998.

### Books

Books • 2022

- D. Sage, "Quand les algorithmes révèlent la machinerie cellulaire," Le corps en images, L. Blanc-Féraud, E. Caruyer, C. Jutten, H. Liebgott, Eds., CNRS Editions, pp. 18-31, 2022.

Books • 2017

- R. Schaer, Y.D. Cid, E. Alkim, S. John, D.L. Rubin, A. Depeursinge, "Web-Based Tools for Exploring the Potential of Quantitative Imaging Biomarkers in Radiology: Intensity and Texture Analysis on the ePAD Platform," Biomedical Texture Analysis, A. Depeursinge, O.S. Al-Kadi, J.R. Mitchell, Eds., Academic Press, London, United Kingdom, ch. 13, pp. 379-410, 2017.
- Y.D. Cid, J. Castelli, R. Schaer, N. Scher, A. Pomoni, J.O. Prior, A. Depeursinge, "QuantImage: An Online Tool for High-Throughput 3D Radiomics Feature Extraction in PET-CT," Biomedical Texture Analysis, A. Depeursinge, O.S. Al-Kadi, J.R. Mitchell, Eds., Academic Press, London, United Kingdom, ch. 12, pp. 349-377, 2017.
- A. Depeursinge, J. Fageot, "Biomedical Texture Operators and Aggregation Functions: A Methodological Review and User's Guide," Biomedical Texture Analysis, A. Depeursinge, O.S. Al-Kadi, J.R. Mitchell, Eds., Academic Press, London, United Kingdom, ch. 3, pp. 55-94, 2017.
- A. Depeursinge, "Multiscale and Multidirectional Biomedical Texture Analysis: Finding the Needle in the Haystack," Biomedical Texture Analysis, A. Depeursinge, O.S. Al-Kadi, J.R. Mitchell, Eds., Academic Press, London, United Kingdom, ch. 2, pp. 29-53, 2017.
- A. Depeursinge, O.S. Al-Kadi, J.R. Mitchell, "Biomedical Texture Analysis," ISBN 978-0128121337, Academic Press, London, United Kingdom, 2017, 350 p.
- A. Depeursinge, J. Fageot, O.S. Al-Kadi, "Fundamentals of Texture Processing for Biomedical Image Analysis: A General Definition and Problem Formulation," Biomedical Texture Analysis, A. Depeursinge, O.S. Al-Kadi, J.R. Mitchell, Eds., Academic Press, London, United Kingdom, ch. 1, pp. 1-27, 2017.

Books • 2016

- Z. Püspöki, M. Storath, D. Sage, M. Unser, "Transforms and Operators for Directional Bioimage Analysis: A Survey," Advances in Anatomy, Embryology and Cell Biology, vol. 219, Focus on Bio-Image Informatics, W.H. De Vos, S. Munck, J.-P. Timmermans, Eds., Springer International Publishing, ch. 3, pp. 69-93, May 21, 2016.

Books • 2014

- M. Unser, P.D. Tafti, "An Introduction to Sparse Stochastic Processes," ISBN 978-1-107-05854-5, Cambridge University Press, Cambridge, United Kingdom, 2014, 367 p.

Books • 2009

- V.K. Goyal, M. Papadakis, D. Van De Ville, "Wavelets XIII," Proceedings of SPIE 7446, 2009.

Books • 2008

- F. Aguet, C. Vonesch, J.-L. Vonesch, M. Unser, "An Introduction to Fluorescence Microscopy: Basic Principles, Challenges, and Opportunities," Microscopic Image Analysis for Life Science Applications, J. Rittscher, R. Machiraju, S.T.C. Wong, Eds., Artech House, Boston, pp. 85-114, 2008.

Books • 2007

- D. Van De Ville, V.K. Goyal, M. Papadakis, "Wavelets XII," Proceedings of SPIE 6701, 2007.

Books • 2006

- S. Jonić, P. Thévenaz, C.O.S. Sorzano, M. Unser, "Spline-Based 3D-to-2D Image Registration for Image-Guided Surgery and 3D Electron Microscopy," Biophotonics for Life Sciences and Medicine, M. Faupel, P. Smigielski, A. Brandenburg, J. Fontaine, Eds., Fontis Media, Lausanne VD, Swiss Confederation, pp. 255-273, 2006.

Books • 2005

- T. Blu, J. Lebrun, "Analyse temps-fréquence linéaire II: représentations de type ondelettes," Temps-fréquence, concepts et outils, F. Hlawatsch, F. Auger, Eds., Hermès Paris, French Republic, pp. 101-138, 2005.
- M. Papadakis, A.F. Laine, M.A. Unser, "Wavelets XI," Proceedings of SPIE 5914, 2005.
- U. Rajashekar, A.C. Bovik, D. Sage, M. Unser, L.J. Karam, R.L. Lagendijk, "Image Processing Education," Handbook of Image & Video Processing (Second Edition), A. Bovik, Ed., Elsevier Academic Press, Amsterdam, Kingdom of the Netherlands, pp. 73-95, 2005.
- M. Unser, A. Aldroubi, A. Laine, "Wavelets Are Enhancing Medical Imaging," Exploring Science and Medical Discoveries: Medical Imaging, C.F. Naff, Ed., Thompson Gale (Greenhaven Press), Detroit MI, USA, pp. 175-179, 2005.
- W. zu Castell, F. Filbir, B. Forster, "Inzell Lectures on Orthogonal Polynomials," Advances in the Theory of Special Functions and Orthogonal Polynomials, R. Álvarez-Nodarse, Series Ed., ISBN 1-59454-108-6, Nova Science Publishers, New York NY, USA, 2005, 199 p.

Books • 2003

- M. Nachtegael, D. Van der Weken, D. Van De Ville, E.E. Kerre, "Fuzzy Filters for Image Processing," ISBN 3-540-00465-3, Springer, Berlin, Federal Republic of Germany, 2003, 386 p.
- M.A. Unser, A. Aldroubi, A.F. Laine, "Mathematical Imaging: Wavelet Applications in Signal and Image Processing X," Proceedings of SPIE 5702, 2003.

Books • 2001

- A.F. Laine, M.A. Unser, A. Aldroubi, "Mathematical Imaging: Wavelet Applications in Signal and Image Processing IX," Proceedings of SPIE 4478, 2001.

Books • 2000

- M. Unser, "Splines and Wavelets for Medical Imaging," Proceedings of the Fourth IEEE EMBS Berder International Summer School on Biomedical Imaging, June 17-24, 2000, Île de Berder, French Republic.
- A. Aldroubi, A.F. Laine, M.A. Unser, "Mathematical Imaging: Wavelet Applications in Signal and Image Processing VIII," Proceedings of SPIE 4119, 2000.
- P. Thévenaz, T. Blu, M. Unser, "Image Interpolation and Resampling," Handbook of Medical Imaging, Processing and Analysis, I.N. Bankman, Ed., Academic Press, San Diego CA, USA, pp. 393-420, 2000.

Books • 1999

- M.A. Unser, A. Aldroubi, A.F. Laine, "Mathematical Imaging: Wavelet Applications in Signal and Image Processing VII," Proceedings of SPIE 3813, 1999.

Books • 1998

- A.F. Laine, M.A. Unser, A. Aldroubi, "Mathematical Imaging: Wavelet Applications in Signal and Image Processing VI," Proceedings of SPIE 3458, 1998.

Books • 1997

- A. Aldroubi, A.F. Laine, M.A. Unser, "Mathematical Imaging: Wavelet Applications in Signal and Image Processing V," Proceedings of SPIE 3169, 1997.

Books • 1996

- U.E. Ruttimann, M. Unser, P. Thévenaz, C. Lee, D. Rio, D.W. Hommer, "Statistical Analysis of Image Differences by Wavelet Decomposition," Wavelets in Medicine and Biology, A. Aldroubi, M.A. Unser, Eds., CRC Press, Boca Raton FL, USA, pp. 115-144, 1996.
- A. Aldroubi, M.A. Unser, "Wavelets in Medicine and Biology," ISBN 0-8493-9483-X, CRC Press, Boca Raton FL, USA, 1996, 616 p.
- M. Unser, "A Practical Guide to the Implementation of the Wavelet Transform," Wavelets in Medicine and Biology, A. Aldroubi, M.A. Unser, Eds., CRC Press, Boca Raton FL, USA, pp. 37-73, 1996.
- M.A. Unser, A. Aldroubi, A.F. Laine, "Mathematical Imaging: Wavelet Applications in Signal and Image Processing IV," Proceedings of SPIE 2825, part I and II, 1996.

Books • 1995

- A.F. Laine, M.A. Unser, M.V. Wickerhauser, "Mathematical Imaging: Wavelet Applications in Signal and Image Processing III," Proceedings of SPIE 2569, 1995.

Books • 1994

- A.F. Laine, M.A. Unser, "Mathematical Imaging: Wavelet Applications in Signal and Image Processing II," Proceedings of SPIE 2303, 1994.

Books • 1992

- A. Aldroubi, M. Unser, "Families of Wavelet Transforms in Connection with Shannon's Sampling Theory and the Gabor Transform," Wavelets: A Tutorial in Theory and Applications, C. K. Chui, Ed., Academic Press, Boston MA, USA, vol. 2, chap. VI, pp. 509-528, 1992.

Books • 1990

- P. Thévenaz, "Motion Analysis," Pattern Recognition and Image Processing in Physics, NATO Advanced Study Institute, Proceedings of the Thirty-Seventh Scottish Universities Summer School in Physics, Dundee, United Kingdom, July 29-August 18, 1990, R.A. Vaughan, Ed., Adam Hilger, Bristol, pp. 129-166.

### Theses

Theses • 2022

- T. Debarre, "Variational Methods for Continuous-Domain Inverse Problems: The Quest for the Sparsest Solution," École polytechnique fédérale de Lausanne, EPFL Thesis no. 9287 (2022), 373 p., September 16, 2022.
- T.-a.M. Pham, "Nonlinear Inverse Problems in Quantitative Phase Imaging," École polytechnique fédérale de Lausanne, EPFL Thesis no. 8941 (2022), 260 p., June 17, 2022.
- S. Aziznejad, "Optimization Over Banach Spaces: A Unified View on Supervised Learning and Inverse Problems," École polytechnique fédérale de Lausanne, EPFL Thesis no. 8943 (2022), 468 p., June 3, 2022.

Theses • 2020

- H. Gupta, "From Classical to Unsupervised-Deep-Learning Methods for Solving Inverse Problems in Imaging," École polytechnique fédérale de Lausanne, EPFL Thesis no. 7360 (2020), 248 p., September 29, 2020.
- L. Donati, "Reconstruction Methods for Cryo-Electron Microscopy: From Model-Based to Data-Driven," École polytechnique fédérale de Lausanne, EPFL Thesis no. 7540 (2020), 215 p., September 18, 2020.

Theses • 2019

- A. Badoual, "Subdivide and Conquer: Active Contours and Surfaces for Biomedical Image Segmentation," École polytechnique fédérale de Lausanne, EPFL Thesis no. 9326 (2019), 268 p., April 26, 2019.

Theses • 2017

- V. Uhlmann, "Landmark Active Contours for Bioimage Analysis: A Tale of Points and Curves," EPFL best doctoral thesis award in electrical engineering, École polytechnique fédérale de Lausanne, EPFL Thesis no. 7951 (2017), 263 p., December 1, 2017.
- D. Schmitter, "Spline Shape Processing: Representation, Learning, and Modeling," École polytechnique fédérale de Lausanne, EPFL Thesis no. 8174 (2017), 241 p., November 27, 2017.
- P. Pad, "Optimal Representations of Sparse Stochastic Processes with Applications in Image Processing," École polytechnique fédérale de Lausanne, EPFL Thesis no. 7631 (2017), 152 p., May 19, 2017.
- J. Fageot, "Gaussian
*versus*Sparse Stochastic Processes: Construction, Regularity, Compressibility," EPFL doctorate award, École polytechnique fédérale de Lausanne, EPFL Thesis no. 7657 (2017), 231 p., April 24, 2017.

Theses • 2016

- Z. Püspöki, "Local Geometric Transformations in Image Analysis," École polytechnique fédérale de Lausanne, EPFL Thesis no. 7014 (2016), 212 p., June 17, 2016.
- E. Bostan, "Sparsity-Based Data Reconstruction Models for Biomedical Imaging," École polytechnique fédérale de Lausanne, EPFL Thesis no. 6974 (2016), 191 p., May 20, 2016.

Theses • 2015

- M. Nilchian, "High Performance Reconstruction Framework for Straight Ray Tomography: From Micro to Nano Resolution Imaging," SSBE research award, École polytechnique fédérale de Lausanne, EPFL Thesis no. 6621 (2015), 221 p., May 11, 2015.
- U.S. Kamilov, "Sparsity-Driven Statistical Inference for Inverse Problems," École polytechnique fédérale de Lausanne, EPFL Thesis no. 6545 (2015), 198 p., March 27, 2015.

Theses • 2013

- A. Bourquard, "Compressed Optical Imaging," École polytechnique fédérale de Lausanne, EPFL Thesis no. 5908 (2013), 157 p., December 23, 2013.
- R.D. Gonzalo, "Segmentation and Tracking in High-Throughput Bioimaging," SSBE research award, École polytechnique fédérale de Lausanne, EPFL Thesis no. 5657 (2013), 186 p., March 15, 2013.

Theses • 2012

- M. Guerquin-Kern, "Wavelet-Based Reconstruction for Magnetic Resonance Imaging," École polytechnique fédérale de Lausanne, EPFL Thesis no. 5361 (2012), 137 p., July 6, 2012.
- J.-C. Baritaux, "Sparsity-Inducing Reconstruction Methods for Fluorescence Diffuse Optical Tomography," École polytechnique fédérale de Lausanne, EPFL Thesis no. 5272 (2012), 158 p., March 9, 2012.

Theses • 2011

- P.D. Tafti, "Self-Similar Vector Fields," École polytechnique fédérale de Lausanne, EPFL Thesis no. 5167 (2011), 234 p., November 8, 2011.
- K.N. Chaudhury, "Optimally Localized Wavelets and Smoothing Kernels," École polytechnique fédérale de Lausanne, EPFL Thesis no. 4968 (2011), 239 p., February 16, 2011.

Theses • 2010

- F. Luisier, "The SURE-LET Approach to Image Denoising," École polytechnique fédérale de Lausanne, EPFL Thesis no. 4566 (2010), 232 p., January 8, 2010.

Theses • 2009

- F. Aguet, "Super-Resolution Fluorescence Microscopy Based on Physical Models," SSBE research award, École polytechnique fédérale de Lausanne, EPFL Thesis no. 4418 (2009), 209 p., May 28, 2009.
- C. Vonesch, "Fast and Automated Wavelet-Regularized Image Restoration in Fluorescence Microscopy," SSBE research award, École polytechnique fédérale de Lausanne, EPFL Thesis no. 4306 (2009), 229 p., May 1, 2009.
- S. Ramani, "Nonideal Sampling and Regularized Interpolation of Noisy Data," École polytechnique fédérale de Lausanne, EPFL Thesis no. 4305 (2009), 243 p., March 6, 2009.
- I. Khalidov, "Operator-Like Wavelets with Application to Functional Magnetic Resonance Imaging," École polytechnique fédérale de Lausanne, EPFL Thesis no. 4257 (2009), 131 p., January 30, 2009.

Theses • 2005

- M. Arigovindan, "Variational Reconstruction of Vector and Scalar Images from Non-Uniform Samples," EPFL doctorate award, École polytechnique fédérale de Lausanne, EPFL Thesis no. 3329 (2005), 172 p., September 16, 2005.

Theses • 2004

- M. Sühling, "Myocardial Motion and Deformation Analysis from Echocardiograms," École polytechnique fédérale de Lausanne, EPFL Thesis no. 3049 (2004), 181 p., July 16, 2004.
- M. Liebling, "On Fresnelets, Interference Fringes, and Digital Holography," SSBE research award, École polytechnique fédérale de Lausanne, EPFL Thesis no. 2977 (2004), 151 p., April 21, 2004.

Theses • 2003

- S. Jonić, "Spline Projection-Based Volume-to-Image Registration," École polytechnique fédérale de Lausanne, EPFL Thesis no. 2901 (2003), 160 p., December 19, 2003.
- M. Jacob, "Parametric Shape Processing in Biomedical Imaging," École polytechnique fédérale de Lausanne, EPFL Thesis no. 2857 (2003), 192 p., September 30, 2003.

Theses • 2002

- M.P. Feilner, "Statistical Wavelet Analysis of Functional Images of the Brain," École polytechnique fédérale de Lausanne, EPFL Thesis no. 2671 (2002), 208 p., November 20, 2002.
- A. Muñoz Barrutia, "Nondyadic and Nonlinear Multiresolution Image Approximations," École polytechnique fédérale de Lausanne, EPFL Thesis no. 2555 (2002), 175 p., April 12, 2002.

Theses • 2001

- J. Kybic, "Elastic Image Registration Using Parametric Deformation Models," École polytechnique fédérale de Lausanne, EPFL Thesis no. 2439 (2001), 180 p., July 26, 2001.
- S. Horbelt, "Splines and Wavelets for Image Warping and Projection," École polytechnique fédérale de Lausanne, EPFL Thesis no. 2397 (2001), 131 p., May 23, 2001.