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 Journals • Conferences • Abstracts • Books • Theses • Preprints • All Publications • ↑Top  

 

Preprints


  1. A. Amini, R. Madani, M. Unser, "A Universal Formula for Generalized Cardinal B-Splines," Applied and Computational Harmonic Analysis, in press.
  2. J. Fageot, M. Unser, "Scaling Limits of Solutions of Linear Stochastic Differential Equations Driven by Lévy White Noises," Journal of Theoretical Probability, in press.
  3. D. Fortun, P. Guichard, V. Hamel, C.Ó.S. Sorzano, N. Banterle, P. Gönczy, M. Unser, "Reconstruction from Multiple Particles for 3D Isotropic Resolution in Fluorescence Microscopy," IEEE Transactions on Medical Imaging, in press.
  4. R. Joyseeree, H. Müller, A. Depeursinge, "Rotation-Covariant Tissue Analysis for Interstitial Lung Diseases Using Learned Steerable Filters: Performance Evaluation and Relevance for Diagnostic Aid," Computerized Medical Imaging and Graphics, in press.
  5. M. Rostykus, F. Soulez, M. Unser, C. Moser, "Compact In-Line Lensfree Digital Holographic Microscope," Methods, in press.
  6. V. Uhlmann, C. Haubold, F.A. Hamprecht, M. Unser, "DiversePathsJ: Diverse Shortest Paths for Bioimage Analysis," Bioinformatics, in press.
  7. T.-a. Pham, E. Soubies, J. Lim, A. Goy, F. Soulez, D. Psaltis, M. Unser, "Phaseless Diffraction Tomography with Regularized Beam Propagation," Proceedings of the Fifteenth IEEE International Symposium on Biomedical Imaging (ISBI'18), Washington DC, USA, April 4-7, 2018, in press.

 

Prepublications

  1. C.-L. Chen, L. Hermans, M.C. Viswanathan, D. Fortun, M. Unser, A. Cammarato, M.H. Dickinson, P. Ramdya, "Imaging Neural Activity in the Ventral Nerve Cord of Behaving Adult Drosophila," http://doi.org/10.1101/250118
  2. J. Fageot, T. Humeau, "Unified View on Lévy White Noises: General Integrability Conditions and Applications to Linear SPDE," arXiv:1708.02500 [math.PR]
  3. J. Fageot, V. Uhlmann, M. Unser, "Gaussian and Sparse Processes Are Limits of Generalized Poisson Processes," arXiv:1702.05003 [math.PR].
  4. J. Fageot, M. Unser, "Scaling Limits of Solutions of SPDE Driven by Lévy White Noises," arXiv:1610.06711 [math.PR].
  5. J. Fageot, M. Unser, J.P. Ward, "Beyond Wiener's Lemma: Nuclear Convolution Algebras and the Inversion of Digital Filters," arXiv:1711.03999 [math.FA]
  6. J. Fageot, M. Unser, J.P. Ward, "The n-Term Approximation of Periodic Generalized Lévy Processes," arXiv:1702.03335 [math.PR].
  7. D. Fortun, M. Storath, D. Rickert, A. Weinmann, M. Unser, "Fast Piecewise-Affine Motion Estimation Without Segmentation," arXiv:1802.01872 [cs.CV]
  8. H. Gupta, K.H. Jin, H.Q. Nguyen, M.T. McCann, M. Unser, "CNN-Based Projected Gradient Descent for Consistent Image Reconstruction," arXiv:1709.01809 [cs.CV]
  9. H.Q. Nguyen, E. Bostan, M. Unser, "Learning Convex Regularizers for Optimal Bayesian Denoising," arXiv:1705.05591 [cs.LG]
  10. Z. Püspöki, A. Amini, J. Fageot, J.P. Ward, M. Unser, "Angular Accuracy of Steerable Feature Detectors," arXiv:1710.03631 [cs.IT]

 

 


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Journal Articles


2018       Journal Articles • 2017 • 2018 • ↑Top 
  1. K.H. Jin, J.C. Ye, "Sparse and Low-Rank Decomposition of a Hankel Structured Matrix for Impulse Noise Removal," IEEE Transactions on Image Processing, vol. 27, no. 3, pp. 1448-1461, March 2018.
  2. H.Q. Nguyen, E. Bostan, M. Unser, "Learning Convex Regularizers for Optimal Bayesian Denoising," IEEE Transactions on Signal Processing, vol. 66, no. 4, pp. 1093-1105, February 15, 2018.
  3. T.-a. Pham, E. Soubies, A. Goy, J. Lim, F. Soulez, D. Psaltis, M. Unser, "Versatile Reconstruction Framework for Diffraction Tomography with Intensity Measurements and Multiple Scattering," Optics Express, vol. 26, no. 3, pp. 2749-2763, February 5, 2018.
  4. D. Schmitter, M. Unser, "Landmark-Based Shape Encoding and Sparse-Dictionary Learning in the Continuous Domain," IEEE Transactions on Image Processing, vol. 27, no. 1, pp. 365-378, January 2018.
2017       Journal Articles • 2016 • 2018 • ↑Top 
  1. H. Deschout, I. Platzman, D. Sage, L. Feletti, J.P. Spatz, A. Radenovic, "Investigating Focal Adhesion Substructures by Localization Microscopy," Biophysical Journal, vol. 113, no. 11, pp. 2508-2518, December 5, 2017.
  2. M. Unser, J. Fageot, J.P. Ward, "Splines Are Universal Solutions of Linear Inverse Problems with Generalized TV Regularization," SIAM Review, vol. 59, no. 4, pp. 769-793, December 2017.
  3. A. Badoual, P. Novara, L. Romani, D. Schmitter, M. Unser, "A Non-Stationary Subdivision Scheme for the Construction of Deformable Models with Sphere-Like Topology," Graphical Models, vol. 94, pp. 38-51, November 2017.
  4. M.T. McCann, K.H. Jin, M. Unser, "Convolutional Neural Networks for Inverse Problems in Imaging—A Review," IEEE Signal Processing Magazine, vol. 34, no. 6, pp. 85-95, November 2017.
  5. D. Schmitter, J. Fageot, A. Badoual, P. Garcia-Amorena, M. Unser, "Compactly-Supported Smooth Interpolators for Shape Modeling with Varying Resolution," Graphical Models, vol. 94, pp. 52-64, November 2017.
  6. M.T. McCann, M. Unser, "High-Quality Parallel-Ray x-Ray CT Back Projection Using Optimized Interpolation," IEEE Transactions on Image Processing, vol. 26, no. 10, pp. 4639-4647, October 2017.
  7. D. Schmitter, M. Unser, "Shape Projectors for Landmark-Based Spline Curves," IEEE Signal Processing Letters, vol. 24, no. 10, pp. 1517-1521, October 2017.
  8. M. Storath, D. Rickert, M. Unser, A. Weinmann, "Fast Segmentation from Blurred Data in 3D Fluorescence Microscopy," IEEE Transactions on Image Processing, vol. 26, no. 10, pp. 4856-4870, October 2017.
  9. E. Soubies, T.-A. Pham, M. Unser, "Efficient Inversion of Multiple-Scattering Model for Optical Diffraction Tomography," Optics Express, vol. 25, no. 8, pp. 21786-21800, September 4, 2017.
  10. K.H. Jin, M.T. McCann, E. Froustey, M. Unser, "Deep Convolutional Neural Network for Inverse Problems in Imaging," IEEE Transactions on Image Processing, vol. 26, no. 9, pp. 4509-4522, September 2017.
  11. P. Pad, K. Alishahi, M. Unser, "Optimized Wavelet Denoising for Self-Similar α-Stable Processes," IEEE Transactions on Information Theory, vol. 63, no. 9, pp. 5529-5543, September 2017.
  12. D. Schmitter, P. García-Amorena, M. Unser, "Smooth Shapes with Spherical Topology: Beyond Traditional Modeling, Efficient Deformation, and Interaction," Computational Visual Media, vol. 3, no. 3, pp. 199-215, September 2017.
  13. M. Storath, A. Weinmann, M. Unser, "Jump-Penalized Least Absolute Values Estimation of Scalar or Circle-Valued Signals," Information and Inference: A Journal of the IMA, vol. 6, no. 3, pp. 225-245, September 2017.
  14. L. Donati, M. Nilchian, S. Trépout, C. Messaoudi, S. Marco, M. Unser, "Compressed Sensing for STEM Tomography," Ultramicroscopy, vol. 179, pp. 47-56, August 2017.
  15. H.Q. Nguyen, M. Unser, "A Sampling Theory for Non-Decaying Signals," Applied and Computational Harmonic Analysis, vol. 43, no. 1, pp. 76-93, July 2017.
  16. J. Castelli, A. Depeursinge, B. de Bari, A. Devillers, R. de Crevoisier, J. Bourhis, J.O. Prior, "Metabolic Tumor Volume and Total Lesion Glycolysis in Oropharyngeal Cancer Treated with Definitive Radiotherapy—Which Threshold Is the Best Predictor of Local Control?," Clinical Nuclear Medicine, vol. 42, no. 6, pp. e281-e285, June 2017.
  17. J. Fageot, A. Fallah, M. Unser, "Multidimensional Lévy White Noise in Weighted Besov Spaces," Stochastic Processes and Their Applications, vol. 127, no. 5, pp. 1599-1621, May 2017.
  18. V. Uhlmann, P. Ramdya, R. Delgado-Gonzalo, R. Benton, M. Unser, "FlyLimbTracker: An Active Contour Based Approach for Leg Segment Tracking in Unmarked, Freely Behaving Drosophila," PLoS ONE, vol. 12, no. 4, pp. 1-21, April 28, 2017.
  19. J. Castelli, A. Depeursinge, V. Ndoh, J.O. Prior, M. Ozsahin, A. Devillers, H. Bouchaab, E. Chajon, R. de Crevoisier, N. Scher, F. Jegoux, B. Laguerre, B. De Bari, J. Bourhis, "A PET-Based Nomogram for Oropharyngeal Cancers," European Journal of Cancer, vol. 75, pp. 222-230, April 2017.
  20. Y.D. Cid, H. Müller, A. Platon, P.-A. Poletti, A. Depeursinge, "3D Solid Texture Classification Using Locally-Oriented Wavelet Transforms," IEEE Transactions on Image Processing, vol 26, no. 4, pp. 1899-1910, April 2017.
  21. A. Depeursinge, Z. Püspöki, J.P. Ward, M. Unser, "Steerable Wavelet Machines (SWM): Learning Moving Frames for Texture Classification," IEEE Transactions on Image Processing, vol. 26, no. 4, pp. 1626-1636, April 2017.
  22. H.Q. Nguyen, M. Unser, J.P. Ward, "Generalized Poisson Summation Formulas for Continuous Functions of Polynomial Growth," The Journal of Fourier Analysis and Applications, vol. 23, no. 2, pp. 442-461, April 2017.
  23. A. Badoual, D. Schmitter, V. Uhlmann, M. Unser, "Multiresolution Subdivision Snakes," IEEE Transactions on Image Processing, vol. 26, no. 3, pp. 1188-1201, March 2017.
  24. B. Lazareff, J.-P. Berger, J. Kluska, J.-B. Le Bouquin, M. Benisty, F. Malbet, C. Koen, C. Pinte, W.-F. Thi, O. Absil, F. Baron, A. Delboulbé, G. Duvert, A. Isella, L. Jocou, A. Juhasz, S. Kraus, R. Lachaume, F. Ménard, R. Millan-Gabet, J.D. Monnier, T. Moulin, K. Perraut, S. Rochat, F. Soulez, M. Tallon, É. Thiébaut, W. Traub, G. Zins, "Structure of Herbig AeBe Disks at the milliarcsecond Scale—A Statistical Survey in the H Band Using PIONIER-VLTI," Astronomy & Astrophysics, Worldwide Astronomical and Astrophysical Research, vol. 599, paper no. A85, pp. 1-41, March 2017.
  25. M. Storath, L. Demaret, P. Massopust, "Signal Analysis Based on Complex Wavelet Signs," Applied and Computational Harmonic Analysis, vol. 42, no. 2, pp. 199-223, March 2017.
  26. M. Rostykus, F. Soulez, M. Unser, C. Moser, "Compact Lensless Phase Imager," Optics Express, vol. 25, no. 4, pp. 4438-4445, February 20, 2017.
  27. V. Petrenko, C. Saini, L. Giovannoni, C. Gobet, D. Sage, M. Unser, M.H. Masson, G. Gu, D. Bosco, F. Gachon, J. Philippe, C. Dibner, "Pancreatic α- and β-Cellular Clocks Have Distinct Molecular Properties and Impact on Islet Hormone Secretion and Gene Expression," Genes & Development, vol. 31, no. 4, pp. 383-398, February 15, 2017.
  28. D. Sage, L. Donati, F. Soulez, D. Fortun, G. Schmit, A. Seitz, R. Guiet, C. Vonesch, M. Unser, "DeconvolutionLab2: An Open-Source Software for Deconvolution Microscopy," Methods—Image Processing for Biologists, vol. 115, pp. 28-41, February 15, 2017.
  29. J.C. Ye, J.M. Kim, K.H. Jin, K. Lee, "Compressive Sampling Using Annihilating Filter-Based Low-Rank Interpolation," IEEE Transactions on Information Theory, vol. 63, no. 2, pp. 777-801, February 2017.
  30. K. Wasmer, P.-M. Pochon, D. Sage, J.H. Giovanola, "Parametric Experimental Study and Design of Experiment Modelling of Sapphire Grinding," Journal of Cleaner Production, vol. 141, pp. 323-335, January 10, 2017.
  31. J. Fageot, M. Unser, J.P. Ward, "On the Besov Regularity of Periodic Lévy Noises," Applied and Computational Harmonic Analysis, vol. 42, no, 1, pp. 21-36, January 2017.
  32. S. Rangan, A.K. Fletcher, P. Schniter, U.S. Kamilov, "Inference for Generalized Linear Models via Alternating Directions and Bethe Free Energy Minimization," IEEE Transactions on Information Theory, vol. 63, no. 1, pp. 676-697, January 2017.
2016       Journal Articles  • 2016  • 2017
  1. H. Choi, K.H. Jin, "Fast and Robust Segmentation of the Striatum Using Deep Convolutional Neural Networks," Journal of Neuroscience Methods, vol. 274, pp. 146-153, December 1, 2016.
  2. J. Castelli, B. De Bari, A. Depeursinge, A. Simon, A. Devillers, G.R. Jimenez, J. Prior, M. Ozsahin, R. de Crevoisier, J. Bourhis, "Overview of the Predictive Value of Quantitative 18 FDG PET in Head and Neck Cancer Treated with Chemoradiotherapy," Critical Reviews in Oncology/Hematology, vol. 108, pp. 40-51, December 2016.
  3. P. Cirujeda, Y.D. Cid, H. Müller, D. Rubin, T.A. Aguilera, B.W. Loo Jr., M. Diehn, X. Binefa, A. Depeursinge, "A 3-D Riesz-Covariance Texture Model for Prediction of Nodule Recurrence in Lung CT," IEEE Transactions on Medical Imaging, vol. 35, no. 12, pp. 2620-2630, December 2016.
  4. K.H. Jin, D. Lee, J.C. Ye, "A General Framework for Compressed Sensing and Parallel MRI Using Annihilating Filter Based Low-Rank Hankel Matrix," IEEE Transactions on Computational Imaging, vol. 2, no. 4, pp. 480-495, December 2016.
  5. V. Uhlmann, S. Singh, A.E. Carpenter, "CP-CHARM: Segmentation-Free Image Classification Made Accessible," BMC Bioinformatics, vol. 17, no. 1, paper no. 51, December 2016.
  6. R. Schorer, A. Badoual, B. Bastide, A. Vandebrouck, M. Licker, D. Sage, "A Feasability Study of Color Flow Doppler Vectorization for Automated Blood Flow Monitoring," Journal of Clinical Monitoring and Computing, article not assigned to an issue, pp. 1-9, November 12, 2016.
  7. B. Meylan, P. Dogan, D. Sage, K. Wasmer, "A Simple, Fast and Low-Cost Method for in situ Monitoring of Topographical Changes and Wear Rate of a Complex Tribo-System Under Mixed Lubrication," Wear—An International Journal on the Science and Technology of Friction, Lubrication and Wear, vol. 364-365, pp. 22-30, October 15, 2016.
  8. D. Fortun, P. Bouthemy, C. Kervrann, "A Variational Aggregation Framework for Patch-Based Optical Flow Estimation," Journal of Mathematical Imaging and Vision, vol. 56, no. 2, pp. 280-299, October 2016.
  9. F. Soulez, É. Thiébaut, A. Schutz, A. Ferrari, F. Courbin, M. Unser, "Proximity Operators for Phase Retrieval," Applied Optics, vol. 55, no. 26, pp. 7412-7421, September 10, 2016.
  10. M. Unser, J. Fageot, H. Gupta, "Representer Theorems for Sparsity-Promoting ℓ1 Regularization," IEEE Transactions on Information Theory, vol. 62, no. 9, pp. 5167-5180, September 2016.
  11. J. Kluska, M. Benisty, F. Soulez, J.-P. Berger, J.-B. Le Bouquin, F. Malbet, B. Lazareff, É. Thiébaut, "A Disk Asymmetry in Motion Around the B[e] Star MWC158," Astronomy & Astrophysics, vol. 591, paper no. A82, July 2016.
  12. A. Weinmann, L. Demaret, M. Storath, "Mumford-Shah and Potts Regularization for Manifold-Valued Data," Journal of Mathematical Imaging and Vision, vol. 55, no. 3, pp. 428-445, July 2016.
  13. M.T. McCann, M. Nilchian, M. Stampanoni, M. Unser, "Fast 3D Reconstruction Method for Differential Phase Contrast x-Ray CT," Optics Express, vol. 24, no. 13, pp. 14564-14581, June 27, 2016.
  14. A. Badoual, D. Schmitter, M. Unser, "An Inner-Product Calculus for Periodic Functions and Curves," IEEE Signal Processing Letters, vol. 23, no. 6, pp. 878-882, June 2016.
  15. R. Schaer, H. Müller, A. Depeursinge, "Optimized Distributed Hyperparameter Search and Simulation for Lung Texture Classification in CT Using Hadoop," Journal of Imaging, vol. 2, no. 2, pp. 1-20, June 2016.
  16. V. Uhlmann, J. Fageot, M. Unser, "Hermite Snakes with Control of Tangents," IEEE Transactions on Image Processing, vol. 25, no. 6, pp. 2803-2816, June 2016.
  17. J. Barker, A. Hoogi, A. Depeursinge, D.L. Rubin, "Automated Classification of Brain Tumor Type in Whole-Slide Digital Pathology Images Using Local Representative Tiles," Medical Image Analysis, vol. 30, pp. 60-71, May 2016.
  18. P. Pad, V. Uhlmann, M. Unser, "Maximally Localized Radial Profiles for Tight Steerable Wavelet Frames," IEEE Transactions on Image Processing, vol. 25, no. 5, pp 2275-2287, May 2016.
  19. Z. Püspöki, D. Sage, J.P. Ward, M. Unser, "SpotCaliper: Fast Wavelet-Based Spot Detection with Accurate Size Estimation," Bioinformatics, vol. 32, no. 8, pp. 1278-1280, April 15, 2016.
  20. F. Arcadu, M. Nilchian, A. Studer, M. Stampanoni, F. Marone, "A Forward Regridding Method with Minimal Oversampling for Accurate and Efficient Iterative Tomographic Algorithms," IEEE Transactions on Image Processing, vol. 25, no. 3, pp. 1207-1218, March 2016.
  21. S. Holden, D. Sage, "Super-Resolution Fight Club," Nature Photonics, vol. 10, no. 3, pp. 152-153, March 2016.
  22. U.S. Kamilov, I.N. Papadopoulos, M.H. Shoreh, A. Goy, C. Vonesch, M. Unser, D. Psaltis, "Optical Tomographic Image Reconstruction Based on Beam Propagation and Sparse Regularization," IEEE Transactions on Computational Imaging, vol. 2, no. 1, pp. 59-70, March 2016.
  23. E. Bostan, E. Froustey, M. Nilchian, D. Sage, M. Unser, "Variational Phase Imaging Using the Transport-of-Intensity Equation," IEEE Transactions on Image Processing, vol. 25, no. 2, pp. 807-817, February 2016.
  24. D. Fortun, P. Guichard, N. Chu, M. Unser, "Reconstruction from Multiple Poses in Fluorescence Imaging: Proof of Concept," IEEE Journal of Selected Topics in Signal Processing, vol. 10, no. 1, pp. 61-70, February 2016.
  25. C. Kervrann, S.T. Acton, J.-C. Olivo-Marin, C.Ó.S. Sorzano, M. Unser, "Introduction to the Issue on Advanced Signal Processing in Microscopy and Cell Imaging," IEEE Journal of Selected Topics in Signal Processing, vol. 10, no. 1, pp. 1-3, February 2016.
  26. C. Kervrann, C.Ó.S. Sorzano, S.T. Acton, J.-C. Olivo-Marin, M. Unser, "A Guided Tour of Selected Image Processing and Analysis Methods for Fluorescence and Electron Microscopy," IEEE Journal of Selected Topics in Signal Processing, vol. 10, no. 1, pp. 6-30, February 2016.
  27. Z. Püspöki, V. Uhlmann, C. Vonesch, M. Unser, "Design of Steerable Wavelets to Detect Multifold Junctions," IEEE Transactions on Image Processing, vol. 25, no. 2, pp. 643-657, February 2016.
  28. D. Schmitter, R. Delgado-Gonzalo, M. Unser, "A Family of Smooth and Interpolatory Basis Functions for Parametric Curve and Surface Representation," Applied Mathematics and Computation, vol. 272, no. 1, pp. 53-63, January 1, 2016.
  29. Z. Püspöki, J.P. Ward, D. Sage, M. Unser, "On the Continuous Steering of the Scale of Tight Wavelet Frames," SIAM Journal on Imaging Sciences, vol. 9, no. 3, pp. 1042-1062, 2016.
  30. M. Storath, A. Weinmann, M. Unser, "Exact Algorithms for L1-TV Regularization of Real-Valued or Circle-Valued Signals," SIAM Journal on Scientific Computing, vol. 38, no. 1, pp A614-A630, 2016.

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